Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00658
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:15422430:15430036:1 gene:SORBI_3003G148400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCACCCATACCCAAGAGAGCCGAGCATCTCCTTGTCCTCCTAATTGTCGCATTCGCC
GCCGCCGCCGCCACCAGCGCCGCCTCCAATGACGCCGGCACCGTCCCCTTCTACCCCTCC
GCGGAGGCCGCCGCAGCCGCGCACTGCGACGGCACGCTCTACCCGGAGCTCTGCCTGTCC
ACACTCGCGGACATCCCGGACCTGCACAAGAAGCCCCTCCCGGACGTCATCTGCGCCGCC
GTGAACCACACCGAGGACGTGGTGACCGCCACCTCCACCAACTGCTCGTACTACCTACAG
GACAGGTCCCTCTCGGCGCGGGACCGCCTCGCCATCAACGACTGCCTGGAGCTGCTGTCC
ACCACCATGGACGAGCTCCGCGCCACCACCGCCGACCTCAGCACGAGCTCCGGCGGCAAC
GGCTCCGCGGCGGCCCCGTCCGTGGGCACCCGGCGCGTGACGATGGACCACGTGATGACG
GTGCTCTCCGCGGCCATCACCAACCAGTACACCTGCCTCGACGGCTTCGCGTACCAGAAC
GGCGGGCGGGTGCGGCACTACATCGAGCCGACCTTCCACCACGTCTCCCGCATGGTGAGC
AACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCAGCCCCAGCCCCTCCTCGGCGCCT
ACGACGACGGAGACTGCAGCGGTGGCGCGGCAGCCATTCATGGGGTACGGGCAGATGGTG
AAGGGGTTCCCGCGGTGGGTGCGTCCCGGGGACCGGCGGCTGCTGCAGGCCCCGGCGACG
GCCATCACCGCGGACGCGGTGGTGGCCAAGGACGGGAGCGGGGGGTACACGACGGTGTCG
GCGGCCGTGGCGGCGGCGCCGACCAACTCGAAGAAGCGGTACGTGATCTACATCAAGGCC
GGGGCGTACATGGAGAACGTGGAGGTCGGGAAGAAGCACGTGAACCTGATGTTCGTCGGC
GACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTTGTGGACGGCTACACCACC
TTCCGCTCAGCCACAGTCGCTGTGGTGGGCAACAACTTCTTGGCCCGCGACCTGACGATC
GAGAACTCGGCCGGCCCGTCCAAGCACCAGGCGGTGGCGCTCCGCGTGGGCGCCGACCTG
TCGGCGTTCTACCGCTGCAGCTTCGTGGGCTACCAGGACACGCTGTACGTGCACTCCCTC
CGGCAGTTCTTCCGCGACTGCGACATCTACGGCACCATCGACTTCGTCTTCGGCAACGCC
GCCGTCGTGCTGCAGGGCTGCAACCTGTACGCGCGCAAGCCGCTGCCCAACCAGAGCAAC
ATCTTCACGGCGCAGGGCCGGGAGGACCCCAACCAGAACACCGGCATCTCCATCCACCGC
TGCAAGGTGGCGGCGGCGGCGGACCTGCTGCAGTCCTCCTCCTCCACCAAGACCTACCTC
GGCCGGCCATGGAAGCAGTACTCCCGCACGGTTTTCCTGCAGTCGGAGCTGGACTCGCTC
ATCGCCCCGGCGGGCTGGCTCGAGTGGGACGGCAACTTCGCGCTCGACACGCTCTACTAC
GGCGAGTACATGAACACGGGGCCCGGCGCCGGAACCTCCGGCCGGGTCAAGTGGAAGGGG
TACCGTGTCATCACCAGCGCGGCCGAGGCCAGCGCGTTCACCGTCGGCTCCTTCATCGAC
GGGGACGTCTGGCTCGCCGGCACGTCCATCCCCTTCACCACCGGCTTGTGA

Peptide Sequence

PEP ID

EES00658
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:15422430:15430036:1 gene:SORBI_3003G148400 transcript:EES00658 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPIPKRAEHLLVLLIVAFAAAAATSAASNDAGTVPFYPSAEAAAAAHCDGTLYPELCLS
TLADIPDLHKKPLPDVICAAVNHTEDVVTATSTNCSYYLQDRSLSARDRLAINDCLELLS
TTMDELRATTADLSTSSGGNGSAAAPSVGTRRVTMDHVMTVLSAAITNQYTCLDGFAYQN
GGRVRHYIEPTFHHVSRMVSNSLAMAKKLPGASPSPSSAPTTTETAAVARQPFMGYGQMV
KGFPRWVRPGDRRLLQAPATAITADAVVAKDGSGGYTTVSAAVAAAPTNSKKRYVIYIKA
GAYMENVEVGKKHVNLMFVGDGIGKTVIKASRNVVDGYTTFRSATVAVVGNNFLARDLTI
ENSAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRDCDIYGTIDFVFGNA
AVVLQGCNLYARKPLPNQSNIFTAQGREDPNQNTGISIHRCKVAAAADLLQSSSSTKTYL
GRPWKQYSRTVFLQSELDSLIAPAGWLEWDGNFALDTLYYGEYMNTGPGAGTSGRVKWKG
YRVITSAAEASAFTVGSFIDGDVWLAGTSIPFTTGL

Transcript Sequence

Transcript ID

EES00658
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:15422430:15430036:1 gene:SORBI_3003G148400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATATAGCAAAGCAACGACTCATAAACCCCAATCTATCACTCTTCACTGTCCACTGTCCAC
TCTGCAGCTCCCTCTGCAGCTCCACTGCACGCGAGAGCAAGCTGCCACCGACAAGGACAC
AATGCCACCCATACCCAAGAGAGCCGAGCATCTCCTTGTCCTCCTAATTGTCGCATTCGC
CGCCGCCGCCGCCACCAGCGCCGCCTCCAATGACGCCGGCACCGTCCCCTTCTACCCCTC
CGCGGAGGCCGCCGCAGCCGCGCACTGCGACGGCACGCTCTACCCGGAGCTCTGCCTGTC
CACACTCGCGGACATCCCGGACCTGCACAAGAAGCCCCTCCCGGACGTCATCTGCGCCGC
CGTGAACCACACCGAGGACGTGGTGACCGCCACCTCCACCAACTGCTCGTACTACCTACA
GGACAGGTCCCTCTCGGCGCGGGACCGCCTCGCCATCAACGACTGCCTGGAGCTGCTGTC
CACCACCATGGACGAGCTCCGCGCCACCACCGCCGACCTCAGCACGAGCTCCGGCGGCAA
CGGCTCCGCGGCGGCCCCGTCCGTGGGCACCCGGCGCGTGACGATGGACCACGTGATGAC
GGTGCTCTCCGCGGCCATCACCAACCAGTACACCTGCCTCGACGGCTTCGCGTACCAGAA
CGGCGGGCGGGTGCGGCACTACATCGAGCCGACCTTCCACCACGTCTCCCGCATGGTGAG
CAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCAGCCCCAGCCCCTCCTCGGCGCC
TACGACGACGGAGACTGCAGCGGTGGCGCGGCAGCCATTCATGGGGTACGGGCAGATGGT
GAAGGGGTTCCCGCGGTGGGTGCGTCCCGGGGACCGGCGGCTGCTGCAGGCCCCGGCGAC
GGCCATCACCGCGGACGCGGTGGTGGCCAAGGACGGGAGCGGGGGGTACACGACGGTGTC
GGCGGCCGTGGCGGCGGCGCCGACCAACTCGAAGAAGCGGTACGTGATCTACATCAAGGC
CGGGGCGTACATGGAGAACGTGGAGGTCGGGAAGAAGCACGTGAACCTGATGTTCGTCGG
CGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTTGTGGACGGCTACACCAC
CTTCCGCTCAGCCACAGTCGCTGTGGTGGGCAACAACTTCTTGGCCCGCGACCTGACGAT
CGAGAACTCGGCCGGCCCGTCCAAGCACCAGGCGGTGGCGCTCCGCGTGGGCGCCGACCT
GTCGGCGTTCTACCGCTGCAGCTTCGTGGGCTACCAGGACACGCTGTACGTGCACTCCCT
CCGGCAGTTCTTCCGCGACTGCGACATCTACGGCACCATCGACTTCGTCTTCGGCAACGC
CGCCGTCGTGCTGCAGGGCTGCAACCTGTACGCGCGCAAGCCGCTGCCCAACCAGAGCAA
CATCTTCACGGCGCAGGGCCGGGAGGACCCCAACCAGAACACCGGCATCTCCATCCACCG
CTGCAAGGTGGCGGCGGCGGCGGACCTGCTGCAGTCCTCCTCCTCCACCAAGACCTACCT
CGGCCGGCCATGGAAGCAGTACTCCCGCACGGTTTTCCTGCAGTCGGAGCTGGACTCGCT
CATCGCCCCGGCGGGCTGGCTCGAGTGGGACGGCAACTTCGCGCTCGACACGCTCTACTA
CGGCGAGTACATGAACACGGGGCCCGGCGCCGGAACCTCCGGCCGGGTCAAGTGGAAGGG
GTACCGTGTCATCACCAGCGCGGCCGAGGCCAGCGCGTTCACCGTCGGCTCCTTCATCGA
CGGGGACGTCTGGCTCGCCGGCACGTCCATCCCCTTCACCACCGGCTTGTGAGCGCACGG
CGGCGGCGTGCTAGGAGGAGTTCACGTACGGCAAGTGATGGCAATAAATTAAATTGGCAG
AGCGGAAGTAATTCGTTCATTTCATCAGAGCCAAAAAGGCACCGATCCAGTCGTGTTGCT
GTCGTTGATTCTTTTGTGTCTGGGGACCACGCCAATTATATAATAATATATGAAATCGTA
CCATATATGCAATCGGTGCATTGTTGCTTTGGC