Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00630
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:14442569:14447347:1 gene:SORBI_3003G143900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCGGCGGAGGAAGGCAATGTGGCTGTACCCCAAGGTGGTCGGCTTCAACCCGCCG
GAGAGGTGGGGCCACTCCGCCTGCTTCTTCGAAGGCGTCGTCTACGTCTTCGGGGGATGC
TGCGGCGGCCTGCACTTCAGCGACGTGCTGACGCTCAACGTGGAGACCATGGCGTGGAGC
TCCCTGGCCACGACGGGGCAGCGCCCGGGCACGCGGGACAGCCACGGCGCCGCGCTGGTG
GGCCACCGGATGCTCGTCTTCGGGGGCACCAACGGCGGCAAGAAGGTGAACGACCTGCAC
GTGCTGGACCTACGCACCAGGGAGTGGACCCGCCCGCAGTGCAAGGGCGCGCCGCCGTCG
CCGCGGGAGAGCCACACCGTCACCGTCGTCGGGGGCGACCGACTCGTCGTCTTCGGCGGG
AGCGGGGAAGGGGAGGGCAACTACCTCAGCGACGTGCACGTGCTGGACGTGCCCACCATG
ACGTGGTCCACGCCGGAGGTCAAGGCGCCGCCCGCGCCCAGGGACAGCCACAGCGCCGTG
GCCGTCGGCAGCAGGCTCTTCGTCTTCGGCGGGGACTGCGGCGACCGGTACCACGGCGAG
GTGGACGTGCTCGACGTCGACACCATGACGTGGTCAAGGTTTCCGGTTAAGGGTGCGTCG
CCTGGTGTCAGAGCAGGTCATGCAGCTATGAGTGTTGGTTCTAAGGTCTATATTATTGGA
GGAGTTGGTGACAAGCAATACTACAGCGATGTCTGGGTTCTTGATGTCACAAACCGTTCG
TGGAGTCAGCTTGAAGTATGCGGGCAGCAACCGCAGGGACGGTTTTCTCATACCGCAGTA
GTCATGAATACTGACATTGCAGTCTATGGAGGATGTGGTGAAGATGAACGTCCCCTGAAT
GAGCTTCTCATTCTGCAATTGGGTTCTGAGCATCCAAATGGCCGTTACAACATTTCAATG
TGCAAGGTTCTTAGCAACCATTGGAGCCAAGAGAAGAGGAAATTTCTCAGATCAGAAACT
AAAGATGCTAGTGTGAGCAATGGAAAAATGGTTCAGAAACCTCGAGAAGCAGAAATCGAG
CAAAGAAATCCATTCCTGCGTGGCCTAGAGAATGGCCGTGCGAAACGAAGGAAAACCGGT
GAAGTTCGCCCAAATGAGCCTGAATCAGAGCAAGAGGAGCACTCACTGTCTCTCTCCCAG
CATTCGTCGCCGTCACAGTCAGATCAAGAGCAGAATGGAGCTCACAAACTCTCAGCCTCT
CCCAACACATCGATTTCAGCCCTGCAACCATTTGTTCGTCTCAAGGCTAATGGCACTCTG
AGGGCTCCTGGACCCGGAGGCATTTCTTCAAGGCCTCTGAAGACGGACCAGTTTCTCCGC
ACCATCGCACCACAACATCGGCAGGAAGTGCAGTTCCTTTCCTCCGATCATAAGCCTCAG
CCCCGACCTCCTGGCCCACCCCTTATTGGCGCCGAGGTTCATGGGACAGTCGATGGAGCT
TTCGATTCTGGATACCTCATGACCGCCGTCGTGAATGGGCAGCTCTTCAGGGGCGTTCTA
TTTGCTCCTGGGCCTGGAGTCACAGCTCCGAGACCGACGGTGCATCACCAGATCCTGACG
AGCTCAGCCGTGCCTCCCCAGCAACAACGGCCACTGCTGGCGCACGCCATCCCTGTCCAC
ACCCGGCCGGTGCCGCAGGCAACCGGCTTCGTGCTGCCGGACTGTGCCCACCACGCGAGG
CAAGGGTTCCCGGCAAAGGCCGTCAAGTCGGAGCCGGAGCGAGGCAGCAGCGACCTGCAC
GATGTTGTGCTCACGCTGGGAGGGCCTGGAGGGGGCAAGTGA

Peptide Sequence

PEP ID

EES00630
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:14442569:14447347:1 gene:SORBI_3003G143900 transcript:EES00630 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MERRRKAMWLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSDVLTLNVETMAWS
SLATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNDLHVLDLRTREWTRPQCKGAPPS
PRESHTVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEVKAPPAPRDSHSAV
AVGSRLFVFGGDCGDRYHGEVDVLDVDTMTWSRFPVKGASPGVRAGHAAMSVGSKVYIIG
GVGDKQYYSDVWVLDVTNRSWSQLEVCGQQPQGRFSHTAVVMNTDIAVYGGCGEDERPLN
ELLILQLGSEHPNGRYNISMCKVLSNHWSQEKRKFLRSETKDASVSNGKMVQKPREAEIE
QRNPFLRGLENGRAKRRKTGEVRPNEPESEQEEHSLSLSQHSSPSQSDQEQNGAHKLSAS
PNTSISALQPFVRLKANGTLRAPGPGGISSRPLKTDQFLRTIAPQHRQEVQFLSSDHKPQ
PRPPGPPLIGAEVHGTVDGAFDSGYLMTAVVNGQLFRGVLFAPGPGVTAPRPTVHHQILT
SSAVPPQQQRPLLAHAIPVHTRPVPQATGFVLPDCAHHARQGFPAKAVKSEPERGSSDLH
DVVLTLGGPGGGK

Transcript Sequence

Transcript ID

EES00630
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:14442569:14447347:1 gene:SORBI_3003G143900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCCATCGAGCGGCCGAGCCAGCGACCGATTGATTGATGTGTGATGCCTCACTAGCTGTGG
CAAATCTCATCAGCAACAGAGACGGCTGGTGTGACACCTTGTGAAAACGCTCGCTCGCCG
CTCCGTCTCTCTCCCTCCTCCCTCCATTCTTTCCTTTGCCGCTTGCTGCTGTCTCCCTCC
TCGTCCTCATCAGTCTCCACCACCCTGCTTCCTTCTTTCTCCTCCTCAGAGAGAGAGAAA
GAGAGAGAGAAACTACAAGGAACCGAGAGAGGTATGGAGCGGCGGAGGAAGGCAATGTGG
CTGTACCCCAAGGTGGTCGGCTTCAACCCGCCGGAGAGGTGGGGCCACTCCGCCTGCTTC
TTCGAAGGCGTCGTCTACGTCTTCGGGGGATGCTGCGGCGGCCTGCACTTCAGCGACGTG
CTGACGCTCAACGTGGAGACCATGGCGTGGAGCTCCCTGGCCACGACGGGGCAGCGCCCG
GGCACGCGGGACAGCCACGGCGCCGCGCTGGTGGGCCACCGGATGCTCGTCTTCGGGGGC
ACCAACGGCGGCAAGAAGGTGAACGACCTGCACGTGCTGGACCTACGCACCAGGGAGTGG
ACCCGCCCGCAGTGCAAGGGCGCGCCGCCGTCGCCGCGGGAGAGCCACACCGTCACCGTC
GTCGGGGGCGACCGACTCGTCGTCTTCGGCGGGAGCGGGGAAGGGGAGGGCAACTACCTC
AGCGACGTGCACGTGCTGGACGTGCCCACCATGACGTGGTCCACGCCGGAGGTCAAGGCG
CCGCCCGCGCCCAGGGACAGCCACAGCGCCGTGGCCGTCGGCAGCAGGCTCTTCGTCTTC
GGCGGGGACTGCGGCGACCGGTACCACGGCGAGGTGGACGTGCTCGACGTCGACACCATG
ACGTGGTCAAGGTTTCCGGTTAAGGGTGCGTCGCCTGGTGTCAGAGCAGGTCATGCAGCT
ATGAGTGTTGGTTCTAAGGTCTATATTATTGGAGGAGTTGGTGACAAGCAATACTACAGC
GATGTCTGGGTTCTTGATGTCACAAACCGTTCGTGGAGTCAGCTTGAAGTATGCGGGCAG
CAACCGCAGGGACGGTTTTCTCATACCGCAGTAGTCATGAATACTGACATTGCAGTCTAT
GGAGGATGTGGTGAAGATGAACGTCCCCTGAATGAGCTTCTCATTCTGCAATTGGGTTCT
GAGCATCCAAATGGCCGTTACAACATTTCAATGTGCAAGGTTCTTAGCAACCATTGGAGC
CAAGAGAAGAGGAAATTTCTCAGATCAGAAACTAAAGATGCTAGTGTGAGCAATGGAAAA
ATGGTTCAGAAACCTCGAGAAGCAGAAATCGAGCAAAGAAATCCATTCCTGCGTGGCCTA
GAGAATGGCCGTGCGAAACGAAGGAAAACCGGTGAAGTTCGCCCAAATGAGCCTGAATCA
GAGCAAGAGGAGCACTCACTGTCTCTCTCCCAGCATTCGTCGCCGTCACAGTCAGATCAA
GAGCAGAATGGAGCTCACAAACTCTCAGCCTCTCCCAACACATCGATTTCAGCCCTGCAA
CCATTTGTTCGTCTCAAGGCTAATGGCACTCTGAGGGCTCCTGGACCCGGAGGCATTTCT
TCAAGGCCTCTGAAGACGGACCAGTTTCTCCGCACCATCGCACCACAACATCGGCAGGAA
GTGCAGTTCCTTTCCTCCGATCATAAGCCTCAGCCCCGACCTCCTGGCCCACCCCTTATT
GGCGCCGAGGTTCATGGGACAGTCGATGGAGCTTTCGATTCTGGATACCTCATGACCGCC
GTCGTGAATGGGCAGCTCTTCAGGGGCGTTCTATTTGCTCCTGGGCCTGGAGTCACAGCT
CCGAGACCGACGGTGCATCACCAGATCCTGACGAGCTCAGCCGTGCCTCCCCAGCAACAA
CGGCCACTGCTGGCGCACGCCATCCCTGTCCACACCCGGCCGGTGCCGCAGGCAACCGGC
TTCGTGCTGCCGGACTGTGCCCACCACGCGAGGCAAGGGTTCCCGGCAAAGGCCGTCAAG
TCGGAGCCGGAGCGAGGCAGCAGCGACCTGCACGATGTTGTGCTCACGCTGGGAGGGCCT
GGAGGGGGCAAGTGAGCCCCTCAGCCTCACGGAAGGCCTCAAGAACGGTCGTGGTCCTGG
CCTACTACTGCTGTTTGCCTCTTCTCTTGGATTGCTCTGTAAATTAGATGTTCTGGTTGA
GGGAAAAATAAGAGTAGTAGTTTTCTGTCATCTTTCCCGGGTGATTCTAGGGTTCCTTAA
CCTGTGACTTTACATATATGAATATAGTGTTAGCTTCATGCAGCTAGTTTTGTTTTCAGC
AGTTGGTGTGACGTGTTAGTATTTTCTGATGACACTACACGAATCGGCTTCAGCCTCTTG
GAAAGGAACA