Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00547
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:11532396:11546534:1 gene:SORBI_3003G125900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTACTCCTCCGCCCGACTTCTCCTCCCTCTCCCCACCTCCGCGCGCTCCTCCGC
CGCCTCCTCTCCACTGGCGCCGGACCCTTCCCCTCACGCATGCTCCCCTCGCCCCGCTCC
ACCGCCGCCGTCCCTCGGCTCCTCTTCGGGCCAAGGGTTGTGGCGGCGGCGGCGGCGGCC
CCGCGGCGGAATGGGGTCCCGGTGCGTGCGTTCATGGCCTCAACGACGGCGTCTGAAGCG
ATGCATGAGAAGCGGGTGGCCGCCGAGTACACTGCTGCCAATGTCCAGGTCCTAGAAGCA
TTAGATGGAGTTCGCACAAGGCCTGGTATGTACATTGGGAGCACAGGACCACGTGGATTG
CATCATCTGGTTTATGAAATCTTGGATAATGCTGTGGATGAAGGTCAAGCGGGTCACGCT
TCAAAGATTGATGTAGTTCTTCATGATGACAATTCTGTTAGTGTAACAGACAATGGACGT
GGGATTCCTACGGATATGCACCCCCAGACGAAGAAATCTTGTGTGGAGACTGTCTTAACG
TTAATGCATGCTGGTGGCAAATTTGGAGGTTCAAAGAGTGGTTACAGTGTCTCTGGAGGG
CTTCATGGTGTTGGTTTATCAGTTGTTAATGCTTTATCAGAGGCACTTGAAGTTACTGTT
TGGCGTGATGGGAACAAATACAGACAAAGCTATTCAAGGGGAAAGCCAACAACGCCGCTA
AGTAGTATCACACTTACTGGTGAAACAAGTCCTCGTCAAGGAACAAGCATTAGATTTTGG
CCTGATAAAGATATATTTACCACCACCATTGATTTTGACTTCAATACAATCTCCAGTCGC
ATTCGGGAGCTTGCCTTTCTAAATCCTGAGCTTACAATAACCTTGACAAAGGAAGAAGGG
CACACAGTTCAACATAATGAATACTGTTATGCTGGTGGCCTTGTTGAATATGTTAAATGG
TTGAATACTGACAAGAAACCCCTGCATGACCCGATTGCGTTCAGAAAGGAGTTGGATGGT
ATAACAGTGGATGTCTCCCTTCAATGGTCCTCTGATTCGTACTCTGATACAGTGCTAGGA
TATGCAAACAGTATCCGGACTATTGATGGTGGTACTCATATTGATGGCCTGAAGGCTTCA
TTGACAAGAACCATTAATAACTTTGCGAAGAAGTCAAAGACTATTAAGGATAAGGATATT
ACCTTGAGTGGGGAGCATGTAAGAGAAGGGATGACATGCGTCATTTCAGTGAAGGTCCCT
AGTCCAGAGTTTGAGGGGCAAACAAAGACAAGGTTGGGAAATCCAGAAGTACGGAGAATA
GTCGAACAGGCTGTTCAAGAAAACTTAACAGAGTACTTAGAGCTTCATCCAGATGTTCTG
GATTCAATCCTATCAAAGTCCCTTAATGCTCTCAAGGCTTCGTTGGCAGCCAAGCGGGCT
AGGGAACTAGTTAGGTCAAAGAGTGTGTTGAAATCTTCTTCAATCCCTGGGAAATTAGCT
GATTGTGCATCAACTAATCCTGAAGAATCTGAAATCTTCATTGTCGAAGGTGATTCTGCG
GGTGGTAGTGCAAAGCAAGGACGAGATAGAAGATTTCAGGCTATTTTGCCCCTAAGAGGT
AAAATTCTCAACATTGAAAGAAGGGATGAAGCAGCCATGTACAAAAATGAAGAGATCCAA
AACCTTATTCTTGCGCTTGGATTAGGAGTGAAGGGTGAGGATTTTAAGAAGGAGGCTCTC
CGGTATCATAAGATAGTTATACTTACTGATGCTGATGTTGATGGCGCACATATCCGGACT
CTCCTCCTTACTTTCTTCTTCAGATATCAAAGAGCATTATTTGATGAAGGTTGCATCTAC
GTTGGTGTACCTCCTCTTTATAAGGTTGAGCGTGGAAAACAAGCACATTACTGCTATGAT
GATGCTGATCTTAAAGAGATAGTTAACACCTTCCCTCCAAATGCGTCATATCATATCCAG
AGGTTTAAAGGTTTGGGTGAGATGATGCCTGTACAACTGTGGGAAACAACAATGGATCCT
GAGAGGCGGCTGTTGAAGCAGCTTAAGGTTGAAGATGCTGCTGAGGCCAATGTTGTGTTC
TCGTCACTTATGGGTAGCCGGGTTGAATATAGGAAGCAACTGATCCAGGAAGCTGCTAGC
ACGATCAGCATGGATCAACTTGACATTTGA

Peptide Sequence

PEP ID

EES00547
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:11532396:11546534:1 gene:SORBI_3003G125900 transcript:EES00547 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALLLRPTSPPSPHLRALLRRLLSTGAGPFPSRMLPSPRSTAAVPRLLFGPRVVAAAAAA
PRRNGVPVRAFMASTTASEAMHEKRVAAEYTAANVQVLEALDGVRTRPGMYIGSTGPRGL
HHLVYEILDNAVDEGQAGHASKIDVVLHDDNSVSVTDNGRGIPTDMHPQTKKSCVETVLT
LMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGNKYRQSYSRGKPTTPL
SSITLTGETSPRQGTSIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNPELTITLTKEEG
HTVQHNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSLQWSSDSYSDTVLG
YANSIRTIDGGTHIDGLKASLTRTINNFAKKSKTIKDKDITLSGEHVREGMTCVISVKVP
SPEFEGQTKTRLGNPEVRRIVEQAVQENLTEYLELHPDVLDSILSKSLNALKASLAAKRA
RELVRSKSVLKSSSIPGKLADCASTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG
KILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVILTDADVDGAHIRT
LLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEIVNTFPPNASYHIQ
RFKGLGEMMPVQLWETTMDPERRLLKQLKVEDAAEANVVFSSLMGSRVEYRKQLIQEAAS
TISMDQLDI

Transcript Sequence

Transcript ID

EES00547
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:11532396:11546534:1 gene:SORBI_3003G125900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACCCCAGCCCCTCCTGCCCCCCGGCTGCTCTCAGCCACAAGTAGGCGGCCGGCAAGCC
AAGACCAAGACCAAGGAGCCCGCGAGCGCGAGGGCTGGCCGACGCGGATGGCGCTACTCC
TCCGCCCGACTTCTCCTCCCTCTCCCCACCTCCGCGCGCTCCTCCGCCGCCTCCTCTCCA
CTGGCGCCGGACCCTTCCCCTCACGCATGCTCCCCTCGCCCCGCTCCACCGCCGCCGTCC
CTCGGCTCCTCTTCGGGCCAAGGGTTGTGGCGGCGGCGGCGGCGGCCCCGCGGCGGAATG
GGGTCCCGGTGCGTGCGTTCATGGCCTCAACGACGGCGTCTGAAGCGATGCATGAGAAGC
GGGTGGCCGCCGAGTACACTGCTGCCAATGTCCAGGTCCTAGAAGCATTAGATGGAGTTC
GCACAAGGCCTGGTATGTACATTGGGAGCACAGGACCACGTGGATTGCATCATCTGGTTT
ATGAAATCTTGGATAATGCTGTGGATGAAGGTCAAGCGGGTCACGCTTCAAAGATTGATG
TAGTTCTTCATGATGACAATTCTGTTAGTGTAACAGACAATGGACGTGGGATTCCTACGG
ATATGCACCCCCAGACGAAGAAATCTTGTGTGGAGACTGTCTTAACGTTAATGCATGCTG
GTGGCAAATTTGGAGGTTCAAAGAGTGGTTACAGTGTCTCTGGAGGGCTTCATGGTGTTG
GTTTATCAGTTGTTAATGCTTTATCAGAGGCACTTGAAGTTACTGTTTGGCGTGATGGGA
ACAAATACAGACAAAGCTATTCAAGGGGAAAGCCAACAACGCCGCTAAGTAGTATCACAC
TTACTGGTGAAACAAGTCCTCGTCAAGGAACAAGCATTAGATTTTGGCCTGATAAAGATA
TATTTACCACCACCATTGATTTTGACTTCAATACAATCTCCAGTCGCATTCGGGAGCTTG
CCTTTCTAAATCCTGAGCTTACAATAACCTTGACAAAGGAAGAAGGGCACACAGTTCAAC
ATAATGAATACTGTTATGCTGGTGGCCTTGTTGAATATGTTAAATGGTTGAATACTGACA
AGAAACCCCTGCATGACCCGATTGCGTTCAGAAAGGAGTTGGATGGTATAACAGTGGATG
TCTCCCTTCAATGGTCCTCTGATTCGTACTCTGATACAGTGCTAGGATATGCAAACAGTA
TCCGGACTATTGATGGTGGTACTCATATTGATGGCCTGAAGGCTTCATTGACAAGAACCA
TTAATAACTTTGCGAAGAAGTCAAAGACTATTAAGGATAAGGATATTACCTTGAGTGGGG
AGCATGTAAGAGAAGGGATGACATGCGTCATTTCAGTGAAGGTCCCTAGTCCAGAGTTTG
AGGGGCAAACAAAGACAAGGTTGGGAAATCCAGAAGTACGGAGAATAGTCGAACAGGCTG
TTCAAGAAAACTTAACAGAGTACTTAGAGCTTCATCCAGATGTTCTGGATTCAATCCTAT
CAAAGTCCCTTAATGCTCTCAAGGCTTCGTTGGCAGCCAAGCGGGCTAGGGAACTAGTTA
GGTCAAAGAGTGTGTTGAAATCTTCTTCAATCCCTGGGAAATTAGCTGATTGTGCATCAA
CTAATCCTGAAGAATCTGAAATCTTCATTGTCGAAGGTGATTCTGCGGGTGGTAGTGCAA
AGCAAGGACGAGATAGAAGATTTCAGGCTATTTTGCCCCTAAGAGGTAAAATTCTCAACA
TTGAAAGAAGGGATGAAGCAGCCATGTACAAAAATGAAGAGATCCAAAACCTTATTCTTG
CGCTTGGATTAGGAGTGAAGGGTGAGGATTTTAAGAAGGAGGCTCTCCGGTATCATAAGA
TAGTTATACTTACTGATGCTGATGTTGATGGCGCACATATCCGGACTCTCCTCCTTACTT
TCTTCTTCAGATATCAAAGAGCATTATTTGATGAAGGTTGCATCTACGTTGGTGTACCTC
CTCTTTATAAGGTTGAGCGTGGAAAACAAGCACATTACTGCTATGATGATGCTGATCTTA
AAGAGATAGTTAACACCTTCCCTCCAAATGCGTCATATCATATCCAGAGGTTTAAAGGTT
TGGGTGAGATGATGCCTGTACAACTGTGGGAAACAACAATGGATCCTGAGAGGCGGCTGT
TGAAGCAGCTTAAGGTTGAAGATGCTGCTGAGGCCAATGTTGTGTTCTCGTCACTTATGG
GTAGCCGGGTTGAATATAGGAAGCAACTGATCCAGGAAGCTGCTAGCACGATCAGCATGG
ATCAACTTGACATTTGAAGGCATCAAGTTAGGCCGACCTTTCTGTGTATGATATAGAAGC
TCCACCTGCTGCTGTTCTTACCACTACAACAGGAATCAAGCGTTGCAGACTTGATACCTT
GCCAACATTTTTTTGGTGCTAGAGTAGCAGAAAACGTCGGGGGGTAGGGTAGAAACATTA
AAACCAGGATGACAAGAGTCAGGTTTCCTGGCACTCCTAACGGAGATTCTGATTCATTTG
TGGCGGTGTTGTAACCATTTTGGCTTGACAGAGTTGAGTGCTCACGGGAGTTCCCTGCTA
TAGGTTCGGTGCTGCCATTTTTTGGCTTGACGCTTGACGGAGTTGAGTGCTCACGGGTGT
AGTTCCCAGCTGTCGGTTCTATACTGCCATCTTGCCTCTGATACGGTGTAATCAGTAATA
TGCTTTTGTTAATCTCCTAATACTTGCT