Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00508
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:10663773:10668027:1 gene:SORBI_3003G117900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCTTCTTGGCGTGCTTGTGCCGATGTCCTCAGGACGAGGACGACGACGACAAGGAA
GGGGAACAGTTCAGAATCAATCGCCAGGTGGCCTCAGTGGACTACTCAAAATCTCCTGAA
AGCTGCCCATTGAAGACTGAGAGAGCGGTGCATATGGAAGGAGCCCAGCTAATTGGTAGA
CATGATGAAGCAACAATCTTCACGTTGCGTCAGCTTGCTGAGGCTACCAAAAATTTCAGT
GAGGACTATCTTTTGGGGCGAGGAGGATTTGGTTGTGTCTATAAAGCAACTCTTAGTAAT
GGACAGGTTGTTGCAGTCAAACAACTTGATCTAAATGGGTTCCAAGGGAACAGAGAATTC
CTTGTGGAGGTTCTCATGCTCAACCTCCTGCATCACCCTAATCTAGTCAATTTGCATGGC
TACTGTGTTGATGGTGATCAGCGCTTGCTTGTTTATGAGTATATGCCATTGGGATCACTA
GAAGACCATCTACATGATCTTGCACCTGATCAAGAACCTCTTGATTGGAGAACACGGATG
AAGATAGCTGCTGGTGCAGCGGCTGGTTTGGAATACCTACATGATAAGGCAAATCCTCCA
GTTATTTACCGAGACATTAAACCATCAAACATTCTTCTTGGTGAAGGGTATCATGCAAAA
TTGTCCGACTTTGGACTTGCTAAGCTTGGTCCTGTAGGTGATAAGACTCATGTGACAACA
CGTGTCATGGGGACACATGGTTATTGTGCTCCTGAATATGCCTTAACTGGACAGCTGACA
GTGAAGTCTGACATCTATAGTTTTGGCGTCGTTTTCCTTGAGCTAATTACAGGCCGAAGA
CCACAAGACAGTGATCGCCCTCCTGAGGAACAAGACTTAGTTGCATGGGCTCGTCCATTG
TTCAAAGACCAAAAGAAGTTTCCCAAGATGGCTGATCCATTGTTGCAGGGCCACTTCCCA
AGGAGGGGTTTATATCAGGCACTGGCTATTGCAGCAATGTGTTTGCAGGAGAAAGCTAAA
AACCGGCCTCCCATTAGGGAAGTTGCCGCAGCTCTCTCTTACTTAGCATCACAAACATAT
GACAGGAACAACACTGCTCCCCGCCGTAACCGTGCTGGGGCTTCAACATCAAGAGTTCTG
GACGATCAGATTGGCCAGGACACCACACTGGCTAATCAACAAGGAGCTCAGATGTCCATG
CATGGCCAGACAAATCACGTCATGCCTGAAGTGAAGGAAACTTCCTGGAGTGGGAATGGT
TCACATCGTGGAGGAAGGGGCAGAGTTACTCCAAATGGCACTGATAGGGAGCGTGCACTT
GCAGATGCCAATGTATGGGCCGAGGCTTGGAGGCGCCAGGAGAAGGCGAGCAAAATGCGA
TAG

Peptide Sequence

PEP ID

EES00508
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:10663773:10668027:1 gene:SORBI_3003G117900 transcript:EES00508 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAFLACLCRCPQDEDDDDKEGEQFRINRQVASVDYSKSPESCPLKTERAVHMEGAQLIGR
HDEATIFTLRQLAEATKNFSEDYLLGRGGFGCVYKATLSNGQVVAVKQLDLNGFQGNREF
LVEVLMLNLLHHPNLVNLHGYCVDGDQRLLVYEYMPLGSLEDHLHDLAPDQEPLDWRTRM
KIAAGAAAGLEYLHDKANPPVIYRDIKPSNILLGEGYHAKLSDFGLAKLGPVGDKTHVTT
RVMGTHGYCAPEYALTGQLTVKSDIYSFGVVFLELITGRRPQDSDRPPEEQDLVAWARPL
FKDQKKFPKMADPLLQGHFPRRGLYQALAIAAMCLQEKAKNRPPIREVAAALSYLASQTY
DRNNTAPRRNRAGASTSRVLDDQIGQDTTLANQQGAQMSMHGQTNHVMPEVKETSWSGNG
SHRGGRGRVTPNGTDRERALADANVWAEAWRRQEKASKMR

Transcript Sequence

Transcript ID

EES00508
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:10663773:10668027:1 gene:SORBI_3003G117900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTTAATTAAAACATGTTTTCTTTCTTTTGTGCGAGCAGACTTTAGGCCGCACGCTGCT
CCTCATCCTCCTATCTCCTCAGTCTTCTTCTTCTCCGCTTTTTTCCCCTTCTTCTGGACG
CACCTGGAAAAGTTGATCCATTTCTCGGCAGCTGCCAGTCCTCTATTGACATCCCGGCGG
ACCCAAAGCCCCCCCAAGGATTGGGGATTTCTGCTTCCTGTTCTGCTCCTGCTGTAGGCG
TTGTTGATTCGGGTGATGAGAGATGGCCTTCTTGGCGTGCTTGTGCCGATGTCCTCAGGA
CGAGGACGACGACGACAAGGAAGGGGAACAGTTCAGAATCAATCGCCAGGTGGCCTCAGT
GGACTACTCAAAATCTCCTGAAAGCTGCCCATTGAAGACTGAGAGAGCGGTGCATATGGA
AGGAGCCCAGCTAATTGGTAGACATGATGAAGCAACAATCTTCACGTTGCGTCAGCTTGC
TGAGGCTACCAAAAATTTCAGTGAGGACTATCTTTTGGGGCGAGGAGGATTTGGTTGTGT
CTATAAAGCAACTCTTAGTAATGGACAGGTTGTTGCAGTCAAACAACTTGATCTAAATGG
GTTCCAAGGGAACAGAGAATTCCTTGTGGAGGTTCTCATGCTCAACCTCCTGCATCACCC
TAATCTAGTCAATTTGCATGGCTACTGTGTTGATGGTGATCAGCGCTTGCTTGTTTATGA
GTATATGCCATTGGGATCACTAGAAGACCATCTACATGATCTTGCACCTGATCAAGAACC
TCTTGATTGGAGAACACGGATGAAGATAGCTGCTGGTGCAGCGGCTGGTTTGGAATACCT
ACATGATAAGGCAAATCCTCCAGTTATTTACCGAGACATTAAACCATCAAACATTCTTCT
TGGTGAAGGGTATCATGCAAAATTGTCCGACTTTGGACTTGCTAAGCTTGGTCCTGTAGG
TGATAAGACTCATGTGACAACACGTGTCATGGGGACACATGGTTATTGTGCTCCTGAATA
TGCCTTAACTGGACAGCTGACAGTGAAGTCTGACATCTATAGTTTTGGCGTCGTTTTCCT
TGAGCTAATTACAGGCCGAAGACCACAAGACAGTGATCGCCCTCCTGAGGAACAAGACTT
AGTTGCATGGGCTCGTCCATTGTTCAAAGACCAAAAGAAGTTTCCCAAGATGGCTGATCC
ATTGTTGCAGGGCCACTTCCCAAGGAGGGGTTTATATCAGGCACTGGCTATTGCAGCAAT
GTGTTTGCAGGAGAAAGCTAAAAACCGGCCTCCCATTAGGGAAGTTGCCGCAGCTCTCTC
TTACTTAGCATCACAAACATATGACAGGAACAACACTGCTCCCCGCCGTAACCGTGCTGG
GGCTTCAACATCAAGAGTTCTGGACGATCAGATTGGCCAGGACACCACACTGGCTAATCA
ACAAGGAGCTCAGATGTCCATGCATGGCCAGACAAATCACGTCATGCCTGAAGTGAAGGA
AACTTCCTGGAGTGGGAATGGTTCACATCGTGGAGGAAGGGGCAGAGTTACTCCAAATGG
CACTGATAGGGAGCGTGCACTTGCAGATGCCAATGTATGGGCCGAGGCTTGGAGGCGCCA
GGAGAAGGCGAGCAAAATGCGATAGCGATTCAGAGCCTGACTGTGACCTCTGCATTAGTT
TTGACATGTCATTGCAAAGATGCTTATTTTGCATACATTTTGAAAGATAACTGTGGATAC
AGAAGGATTGTTAGAAGATAATGAGGAATAATGTGCAGCGGAAATGTAGAGCTTCACCAG
AGTGAGCGCTTCAAAGATTTCACCGGTGGAATCTACAGTACTCAGACTTGTTTCACTGCG
TACATGTAGTTTGCTTTATAGACACAGACACTCCTCACTCCATAGATACATGTAATAGCT
CCATAATAGGCACACGACCTTTCTGTAGTGGAAGTTCAGCGGTTTTGGATACATAACATA
GGATCCGCTGTTGGCATACATGAAATGGTATGTGTTACCACTTACAACATATACATTTTT
ATGTCATTCACGTTAAAAACTTCGGTGCTCTTTTTC