Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00505
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:10504859:10506428:1 gene:SORBI_3003G116500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCAGCTTGTCACTGGACATGCCAATGAAGCCACTGGACCCCCACGCCATCGCCGGC
GACTCGCAGGCGATTCAAGACTTCTTGGCCGAGTACTACCGCAACGTCGACAAGTACCCG
GTCAGGGCGGCGGACCTGGAGCCAGGCCGGGTGCGCAAGCTGCTCCCCGACGCCGCGCCA
GAGCACGGCGAGCCGATGGACCACATACTGGAAGACGTGAGGCGCGAAATCCTGCCGGGG
CTCACCCACTGGCAGAGTCCTCGCTTCTTCGCTTTCTTCCCGGCTAACGCCAGCTCCGCT
GGGCTCGCGGCGGAGATGCTGTCGGTCGGCCTCAACGTCGTGCCCTTCGTGTGGGCCGCG
TCGCCGGCTGCCGCGGAGCTCGAGAGCGTCGTCGTCGACTGGATGGCGCGGCTGTTCGGC
CTGCCGCGCCGGTTCCTCTTCTTCGGCGGCGGCGGTGGCGTCCTGCAGGGGAGCACGTGC
GAGGCCGTGGTGTGCACGCTAGCCGCCGCGCGGGACCGCGCGCTGGGTAGGCTCGGGCAC
GAGGCCATCGCCAGGCTGGTGGTCTACGCCTCCGACCAGACGCACGCCACGTTCCAGAAG
GGCGCCCGGCTCGTCGGGATCAAGCCGTCGAACTTCCGCGTCATCAGGACGTCGGCGGCA
TCCGGGTACGGTCTCACCGCGGAAGCCGTCCGCGCCGCCGTCGACCGCGACGTCGGCCTC
GGGCTGGTGCCGCTCTACCTCTGCGCCACGGTGGGCACGACGGGGCTCGGCGCCGTCGAC
CCCGTTCGCGAGATCGGGGAGGAGGCGCGCCGCCACGGCATGTGGGTGCACCTCGACGCA
GCGTACGCCGGCAGCGCGGCCATCTGCCGGGAGTTCCAGGACTACCTCGACGGCGCGGAG
CTCGCCGACTCGGTGAGTATGAACCCACACAAGTGGTTCCTTACCAACATGGACTGCTGC
TGCCTGTGGGTGGCAAGACCCCGTGACCTGATCTCGGCGCTGTCCACCGACCCGGAGTAC
CTCAAGAACGTCGGCGCAGACGACGACGTCGCGGGAAAGCCGGCCGCCATAGACTATAAG
GACTGGCAGATCTCCATGTCGCGCCGGTTCCGTGCCATCAAGCTCTGGGTCATACTGCGG
CGGTATGGTGCGGCTGGCATGCGTGCGCACATCCGTCGGCACGTCGCAGCAGCCAAGTGG
TTCGAGCAGAGGGTGGCGGCCGACGAGCGCTTCGAGGTGGTGGTCCCGAGGACGTTCTCC
CTGGTTTGCTTCCGCCTCGCACCACGGGTCGGCCGGGACGACGACGACGCCACGAACCAC
GTGAACCGGGACCTCCTCGCGGCGGTGAACGCGAGCGGACGGGCGTTCATGACGCACTTC
GTGGTAGACGGCAAGTTCGTGATCCGGCTAGCTGTCGGCGGCGCCTCGACGGAGCTGCAG
CACGTCATGGAGGTGTGGGACCTGCTGCAGGGCAAGGCCGTTGAGGTTCTACAGCACTAT
CAAACCTAA

Peptide Sequence

PEP ID

EES00505
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:10504859:10506428:1 gene:SORBI_3003G116500 transcript:EES00505 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGSLSLDMPMKPLDPHAIAGDSQAIQDFLAEYYRNVDKYPVRAADLEPGRVRKLLPDAAP
EHGEPMDHILEDVRREILPGLTHWQSPRFFAFFPANASSAGLAAEMLSVGLNVVPFVWAA
SPAAAELESVVVDWMARLFGLPRRFLFFGGGGGVLQGSTCEAVVCTLAAARDRALGRLGH
EAIARLVVYASDQTHATFQKGARLVGIKPSNFRVIRTSAASGYGLTAEAVRAAVDRDVGL
GLVPLYLCATVGTTGLGAVDPVREIGEEARRHGMWVHLDAAYAGSAAICREFQDYLDGAE
LADSVSMNPHKWFLTNMDCCCLWVARPRDLISALSTDPEYLKNVGADDDVAGKPAAIDYK
DWQISMSRRFRAIKLWVILRRYGAAGMRAHIRRHVAAAKWFEQRVAADERFEVVVPRTFS
LVCFRLAPRVGRDDDDATNHVNRDLLAAVNASGRAFMTHFVVDGKFVIRLAVGGASTELQ
HVMEVWDLLQGKAVEVLQHYQT

Transcript Sequence

Transcript ID

EES00505
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:10504859:10506428:1 gene:SORBI_3003G116500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGAATACATCAATTTCTCCAGGAACCTGAAGCTTCTGCCAGATTAACTTATCGGCGCTGC
GATGGGCAGCTTGTCACTGGACATGCCAATGAAGCCACTGGACCCCCACGCCATCGCCGG
CGACTCGCAGGCGATTCAAGACTTCTTGGCCGAGTACTACCGCAACGTCGACAAGTACCC
GGTCAGGGCGGCGGACCTGGAGCCAGGCCGGGTGCGCAAGCTGCTCCCCGACGCCGCGCC
AGAGCACGGCGAGCCGATGGACCACATACTGGAAGACGTGAGGCGCGAAATCCTGCCGGG
GCTCACCCACTGGCAGAGTCCTCGCTTCTTCGCTTTCTTCCCGGCTAACGCCAGCTCCGC
TGGGCTCGCGGCGGAGATGCTGTCGGTCGGCCTCAACGTCGTGCCCTTCGTGTGGGCCGC
GTCGCCGGCTGCCGCGGAGCTCGAGAGCGTCGTCGTCGACTGGATGGCGCGGCTGTTCGG
CCTGCCGCGCCGGTTCCTCTTCTTCGGCGGCGGCGGTGGCGTCCTGCAGGGGAGCACGTG
CGAGGCCGTGGTGTGCACGCTAGCCGCCGCGCGGGACCGCGCGCTGGGTAGGCTCGGGCA
CGAGGCCATCGCCAGGCTGGTGGTCTACGCCTCCGACCAGACGCACGCCACGTTCCAGAA
GGGCGCCCGGCTCGTCGGGATCAAGCCGTCGAACTTCCGCGTCATCAGGACGTCGGCGGC
ATCCGGGTACGGTCTCACCGCGGAAGCCGTCCGCGCCGCCGTCGACCGCGACGTCGGCCT
CGGGCTGGTGCCGCTCTACCTCTGCGCCACGGTGGGCACGACGGGGCTCGGCGCCGTCGA
CCCCGTTCGCGAGATCGGGGAGGAGGCGCGCCGCCACGGCATGTGGGTGCACCTCGACGC
AGCGTACGCCGGCAGCGCGGCCATCTGCCGGGAGTTCCAGGACTACCTCGACGGCGCGGA
GCTCGCCGACTCGGTGAGTATGAACCCACACAAGTGGTTCCTTACCAACATGGACTGCTG
CTGCCTGTGGGTGGCAAGACCCCGTGACCTGATCTCGGCGCTGTCCACCGACCCGGAGTA
CCTCAAGAACGTCGGCGCAGACGACGACGTCGCGGGAAAGCCGGCCGCCATAGACTATAA
GGACTGGCAGATCTCCATGTCGCGCCGGTTCCGTGCCATCAAGCTCTGGGTCATACTGCG
GCGGTATGGTGCGGCTGGCATGCGTGCGCACATCCGTCGGCACGTCGCAGCAGCCAAGTG
GTTCGAGCAGAGGGTGGCGGCCGACGAGCGCTTCGAGGTGGTGGTCCCGAGGACGTTCTC
CCTGGTTTGCTTCCGCCTCGCACCACGGGTCGGCCGGGACGACGACGACGCCACGAACCA
CGTGAACCGGGACCTCCTCGCGGCGGTGAACGCGAGCGGACGGGCGTTCATGACGCACTT
CGTGGTAGACGGCAAGTTCGTGATCCGGCTAGCTGTCGGCGGCGCCTCGACGGAGCTGCA
GCACGTCATGGAGGTGTGGGACCTGCTGCAGGGCAAGGCCGTTGAGGTTCTACAGCACTA
TCAAACCTAA