Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00498
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:10257896:10262483:1 gene:SORBI_3003G113800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCAGCTGGTGTAGCCCCTTCTGGGTTCAAGAACAGCAGCAGCGCCAGCATTGGT
GTGGAGAAGTTGCAAGATCAGATGAACGAGATAAAGATTAGAGATGATAAGGAAGTTGAA
GCAACCATAATTAATGGGAAAGGGACTGAAACTGGGCACATAATTGTCACGACTACTGGT
GGCAAGAATGGTCAACCAAAACAGACAGTGAGCTACATGGCTGAGCGCATTGTAGGTCAA
GGTTCTTTTGGGATTGTCTTCCAGGCTAAGTGTTTGGAGACGGGTGAGACTGTTGCGATA
AAGAAGGTTCTTCAGGATAAGCGTTACAAGAACCGTGAGCTGCAGACCATGCGCCTTCTT
GACCACCCTAATGTTGTTGCTTTGAAGCATTGCTTCTTTTCAACAACTGAGAAGGATGAG
CTTTATCTAAACTTGGTCCTTGAGTATGTGCCAGAGACAGTTCATCGAGTTGTGAAGCAT
CACAACAAGATGAACCAACGCATGCCACTTATTTATGTGAAGCTGTATATGTACCAGATA
TGTAGGGCATTGGCTTACATTCATGGTACTATCGGTGTCTGCCACAGAGATATTAAGCCA
CAAAATCTTCTGGTGAACCCACACACCCACCAGCTTAAACTATGTGACTTTGGTAGTGCA
AAAGTTCTGGTCAAGGGGGAACCAAACATATCGTACATCTGCTCCCGATACTATAGGGCT
CCCGAGCTCATATTTGGTGCTACTGAGTATACCACAGCGATTGACATTTGGTCTGCTGGA
TGTGTTCTTGCTGAGCTTATGCTAGGGCAGCCTCTGTTTCCGGGTGAAAGTGGCGTGGAC
CAACTTGTTGAAATCATCAAGGTCCTTGGTACTCCAACAAGGGAAGAGATTAAATGCATG
AACCCGAATTACACAGAGTTTAAGTTCCCACAAATCAAAGCACACCCATGGCACAAGGTA
TTCCACAAAAGGATGCCGCCAGAAGCTGTTGATCTGGTCTCTCGGCTACTCCAGTACTCC
CCAAATCTGAGATGCACTGCTGTGGAGGCACTTGTTCACCCATTCTTTGATGAGCTTCGA
GATCCTAATACCCGCCTTCCAAATGGCCGCTTTTTGCCACCCCTTTTCAATTTCAAGGCT
CACGAATTGAAAGGAGTCCCAGCAGACATTGTTGCGAAATTGATTCCAGAACATGCAAAG
AAGCAATGCTCCTATGTCGGATTGTGA

Peptide Sequence

PEP ID

EES00498
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:10257896:10262483:1 gene:SORBI_3003G113800 transcript:EES00498 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASAGVAPSGFKNSSSASIGVEKLQDQMNEIKIRDDKEVEATIINGKGTETGHIIVTTTG
GKNGQPKQTVSYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL
DHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHRVVKHHNKMNQRMPLIYVKLYMYQI
CRALAYIHGTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA
PELIFGATEYTTAIDIWSAGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM
NPNYTEFKFPQIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTAVEALVHPFFDELR
DPNTRLPNGRFLPPLFNFKAHELKGVPADIVAKLIPEHAKKQCSYVGL

Transcript Sequence

Transcript ID

EES00498
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:10257896:10262483:1 gene:SORBI_3003G113800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGGCCTCGGCAGGCAGCAGGCAGGCACAAATCATTTCGGCCGCTGCGTCGCGTTGGGAG
CAGTATTCTGCTGCGTCCCGACAAGCGGAAAGAAGAGGCGGGGGAGGGAGGTAGAAAGGG
GGAGGAAAGGACGGGAGGGAGAGGAGCAGGGCGAGCAGCCAGAGAACACAGGGAGGGAGG
TAGAGAGGCGGAGGCGGAGGAGGAGGGGGAGTAGGGAGAAGGCGAAGAGGAGGAACCAAA
TCTCGGAGGTGAACAGAGAGATTTCTTTGGCGGAGGAAGGAGGAGGTTAGAGGTATGGAC
ACCCATCTGTTCTTGCTCCTAGATTTGCCGGTTTGTTCTTCTCTGTTGGTCGTTTGTGAC
CGCGCGCGAATGGGCGTTCCGTTCTTGGTCCATGTTTGCGTGCGCCGCTGGCGGTTCTGG
GAGTTCTGGTCATCCGTCTCCTCTCCTGGGATCTGCCTTTTCCCGGTGAGTGGCGCGGAC
CGTTCGGCGGCCAAAGTTGGGCCTGTTCTCTTCGCGTGGGTTAGCGACGATTTCTGGAGC
GTTTGCTGGGTTCTTGGCGGAGTAGGCATCGTTCTGTGAAAGATGCGCTCTTTCTCCGAG
TTTCTGTTCATGTTGAAGTCAGCCTAGAGGCTAGAGCGCTAGCGCGGATCTCATGGCTTC
TGTTCCTCTTGTCTGTCGGTGCGTATGTTCTGCTCTAGCCATCCATGCGACATCAAATCC
ATCAATTAGTGTCTAAGCCATCAATTCTTTGTCGATTTGCTTGTTCCCTTTCGTTGCAGG
CTCGGAAATGCCCCTGAACAGATTCAGAGGGGGTCCTAAGTTAGGATTATTTGCTTTGAC
TCTCCGAGAGTTAGGAGGAGCACGTTACCTTGAAATGCTTGAGTTCTAGCCGAGACATGT
GCAGCCGACCTTTTTTTTCCCTTACATTCTAAGTTAGTCTTTAGAAGGCGAAGCCTTGCT
TCGCGGACGAACATAGTGTCTGTATCCTTGTGAGTATCTTCAGAGGGGAGGGTCAAGATA
AGAAATCCCTTCGATTCCATAGCTAAACATGGGTACAGTAAACACGACTGGCTTCGTTTT
ACGCGGTTTAGATAAACCGTGAGCGGTTCTTGCAATGTGTGTAAACTATTCGGTCATTTC
TCTGCTATATTTTCTGTCGGTTGCCTGCTTGGCTCATGACTTAAGCCGTGTTTGCAAGTC
TAGGAAGAACTTGTTATCATTTCTTATAATTTACCTATATTCCAGGGATGGGCTGTACTA
CTTGTTGACAAAGTTCAGCTCGTTAGACATTATAAGCATCTGCGGATGCGAACGATTCTG
CCATTGCAATATCTAGAACCATCCCTCTGATCGATTTGTTTGTTAATCCACTTACAGGTA
GCCCAATAGATCTGCTGCTGTTGGGGGAGTTGATGCAAAGCTGAGTTGCTGCACGTTGGA
TTCCTTCAGAGATGGCTTCAGCTGGTGTAGCCCCTTCTGGGTTCAAGAACAGCAGCAGCG
CCAGCATTGGTGTGGAGAAGTTGCAAGATCAGATGAACGAGATAAAGATTAGAGATGATA
AGGAAGTTGAAGCAACCATAATTAATGGGAAAGGGACTGAAACTGGGCACATAATTGTCA
CGACTACTGGTGGCAAGAATGGTCAACCAAAACAGACAGTGAGCTACATGGCTGAGCGCA
TTGTAGGTCAAGGTTCTTTTGGGATTGTCTTCCAGGCTAAGTGTTTGGAGACGGGTGAGA
CTGTTGCGATAAAGAAGGTTCTTCAGGATAAGCGTTACAAGAACCGTGAGCTGCAGACCA
TGCGCCTTCTTGACCACCCTAATGTTGTTGCTTTGAAGCATTGCTTCTTTTCAACAACTG
AGAAGGATGAGCTTTATCTAAACTTGGTCCTTGAGTATGTGCCAGAGACAGTTCATCGAG
TTGTGAAGCATCACAACAAGATGAACCAACGCATGCCACTTATTTATGTGAAGCTGTATA
TGTACCAGATATGTAGGGCATTGGCTTACATTCATGGTACTATCGGTGTCTGCCACAGAG
ATATTAAGCCACAAAATCTTCTGGTGAACCCACACACCCACCAGCTTAAACTATGTGACT
TTGGTAGTGCAAAAGTTCTGGTCAAGGGGGAACCAAACATATCGTACATCTGCTCCCGAT
ACTATAGGGCTCCCGAGCTCATATTTGGTGCTACTGAGTATACCACAGCGATTGACATTT
GGTCTGCTGGATGTGTTCTTGCTGAGCTTATGCTAGGGCAGCCTCTGTTTCCGGGTGAAA
GTGGCGTGGACCAACTTGTTGAAATCATCAAGGTCCTTGGTACTCCAACAAGGGAAGAGA
TTAAATGCATGAACCCGAATTACACAGAGTTTAAGTTCCCACAAATCAAAGCACACCCAT
GGCACAAGGTATTCCACAAAAGGATGCCGCCAGAAGCTGTTGATCTGGTCTCTCGGCTAC
TCCAGTACTCCCCAAATCTGAGATGCACTGCTGTGGAGGCACTTGTTCACCCATTCTTTG
ATGAGCTTCGAGATCCTAATACCCGCCTTCCAAATGGCCGCTTTTTGCCACCCCTTTTCA
ATTTCAAGGCTCACGAATTGAAAGGAGTCCCAGCAGACATTGTTGCGAAATTGATTCCAG
AACATGCAAAGAAGCAATGCTCCTATGTCGGATTGTGAAATGGCTGTGCCTTGAGACTGA
ACCTATGGTTGCAATTGTGCATTTCCCCTGGGATGTTGGATGATCTGAGGCATGCGAGCC
CGTCGTTGAAGATGCAAGGTTATCTACTTGTACGACAATGTGACCTGTGTAGCTGAGTAG
TCTATGTCGCAGTGACATGTAACGGCACCCCCTTCCTACTAACTGACGCTTACTGGAGAT
TGCCATAGCTGATCTTGTAATTTGTTATAGAGCAGTATGAATGTATTTATGGTAGCTTGA
ATCTATGTATGGATTCACTTCGTTTTTTCATGTTTCCTTGTCTCCGACCCAGACTGCTAC
CGTATTTTGTTTCAGAATTCCTAGCTACCTGTTGTCTAGTGCCTACCACCTTGCTCCTGT
CGATTATTGCACACTGGCGATGGTATCTGCTGTTGATTGTTGCGAAAATCTTATGGTTAT
TTACATCTGTATTTGTTCAGTCTGGAAGTTTTCTGATTTGATCGCTCCTACCAGAAAGTT
GTGCTATTGCAGCGTTTGAGATGAGTGATACTGATTTATTGCGAGGGAAAAATATGGCTG
AAATATAGTGCTGATAAGTTCTAAGCGAACAGGGATCCTTCGTATGGCTTCTTTCCTTGT
GCATCTTCAGGAGTGA