Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00435
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:8716965:8720882:1 gene:SORBI_3003G099000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCAGGCGGCAAGCAAGCGCAGTGCTTTGCTCCGGCCAGTGATGTACGAGGATGAG
CCTTCCTCAATGTCCCTCGAGCTATTCAGCCACGGTATCGTCGTGGACGGTGACGAGGCT
GACGGTGGCTCTGCTGCGGCAGCCCTCTCGCTGCACCTCGCTTTCGACGACGACAACTTC
AAGGGCGGGTGTGACGCCTCGGCTGATTACTACAGCAGCTGGGCTGCCTACGATGGCTCG
GGCGCCACATCCAGCTCGAGCTCGTCGGTGCTCAGCTTCGAGCAGGCTGGCAGCGGCGGA
CAGCATCACCTGGCCTATGGCGAAGACGGGTGCGCTTTCTGGATGGACCCAGCCGCTGGC
ATGGTGGAGCATCCGGCACAGCAGCAGCGCAGATCCGGCTGCAACTTCGGACTCATCGTC
AGCCCAGGAAGCTCGCCTGATGATGCCGGCTTACACATCCAGGAGCCGGGCGCCGTCCAG
CTGCCGGCTAAGCCCCCGCACAAGCGTGCACGCCGGGATGGTGAAGTGCAAGCGGCAGCG
GCGAAGAAGCAGTGTGGTGGCGGGGCCAGGAAGAGCAAGGCCAAGGCTGCTCCTGCTCCT
ACCAAGGACCCTCAAAGCGTAGCTGCAAAGGTTCGAAGAGAGAAGATTGCCGAGAAGCTC
AAGGTCCTGCAAGATCTCGTGCCCAATGGCACCAAGGTGGACTTGGTCACCATGCTAGAG
AAGGCGATCACCTATGTTAAGTTTCTCCAGCTGCAAGTGAAGGTGTTGGCTGCCGATGAG
TTCTGGCCTGCACAAGGAGGCAAGGCACCAGAGCTCTCTCAAGTGAAGGACGCCTTGGAT
GCCATCCTGTCATCCCAGCAGTACCCTAAATAA

Peptide Sequence

PEP ID

EES00435
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:8716965:8720882:1 gene:SORBI_3003G099000 transcript:EES00435 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAQAASKRSALLRPVMYEDEPSSMSLELFSHGIVVDGDEADGGSAAAALSLHLAFDDDNF
KGGCDASADYYSSWAAYDGSGATSSSSSSVLSFEQAGSGGQHHLAYGEDGCAFWMDPAAG
MVEHPAQQQRRSGCNFGLIVSPGSSPDDAGLHIQEPGAVQLPAKPPHKRARRDGEVQAAA
AKKQCGGGARKSKAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLE
KAITYVKFLQLQVKVLAADEFWPAQGGKAPELSQVKDALDAILSSQQYPK

Transcript Sequence

Transcript ID

EES00435
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:8716965:8720882:1 gene:SORBI_3003G099000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCCTGCGCATATATGTGAAATTACAAATGACTTTGTTAGTAAGCATACTGGCTTGTAGC
GAGGACTGAGGTAGTGTTAATACGGTGATGTACCGTATTAGTTATGCCCTGGCTGGTTGA
CACCTGTTGCTCATATCAACATCACTGAATGACTGAATTGCTATTGCTGTGCTGTCAGCC
ACCTGATTCTGGTCAGCTGAAACCAGAGGAGTAGAGGACAGCGGTGGGTGGTTGCGTTTG
CTGTGTCAGCACAACGCACTTGTATCATAACACATAGTTGTACAGCCATTATATTGGAGC
AACCCAACTCAACCAAGGCACAAAAGCATGCTTAGAATTAATGATATCCAGTTTGTTGAG
AAGTTATCCCCAAAGCATCTGATCAACAGGGAATATATAGTCCAGGCATGCACTAGCTGT
TGTTTACTCGAAGCAGACGAGTACGTCAGCTCTGGTCTTCAGAGACTGTCTTGATGCTGT
ATAATACTGGTACATTCTACTTGTGAATTGTGATACTTCATATATCCGATTTTCCAGTTT
TGTATTCCAGGATACACGGAGTTGAGTAGGTTGGTGAGGTGGAATCTCTACGTGCTGACC
GCGTCGCACGTCTGTTTGTCTGTTCTTCTTTCTGAGAGATTGCAGGTCCAGGTTTCTCAC
CGCTGCTGAGGCTGAAGCTGACTCCGGAGGCCGGAGGACATATAGTTTAAGCATTTTTGC
AGCAAGTGTGACACATGCGCTCAACATAATTTTTTCAGCACAGTGTTGGGCTCTGCTAGC
AAGGCCATGTGAAGCTTAGAAAAGCCACTCTTGCAAGGACAATCAAGCTTTGGTTAATTT
TCAGTGGTACATAGCTTCCCAATTAAACGTGAGAGCACGTCGAAGCTTGGAGCGGATACC
ATTGCTGACCAGCCTTGTTAAGATGCCCGTGCATGAAGGTTATCTTCCCTGTACGTAGCA
GTATAGCTTATATTATTTAAGGTACGTACGGCTAACTAACTTAAGTAATGTATAGCTGTC
CAGTGTACCACTAGTGCTCGTGTTTAGCTGGATGCAAGTCGGTAATTGTACCGATTGTCC
ATTAACACTATTTTCTTCTACAAAACAGAAGAATGATGAGTATGTGTACTTCATGGTTAA
CTGCACATTTGATGCCTATCTTTCTCCAAACATATTTAAACTGTTTGGAACTCAGAATTG
ACCATTTGAGCACATTGTCTTTCAGGAAGCCAGATAAACCAGATTGGTAAATGTCACAGG
AAGGCAGTCTCTTAGGTGGCTACCTGTTACACATAGGATATGACATTATTTTGCAGACAT
TTTCACACCAGCATATGCTAGTCTCCATACGTCCCAAATTGTAAGTCGTTTTAGCTTTGT
TCTAAGTCAAACTTCGCCAACTTTGATCAACTAGTTTCTACAAAGATGCACAAACATCTA
CTACATCAAAATATATTTATTAATACACTGTGAAATATATTTAGACGTGGGTTCATTTGA
GATCGTAGATGTCAGTATATTTTCTTTTATAAACTTGGTAGTCTGTGCATGCATGACAAT
GAAGTTTTTCCTCTATGCATGCATATGTATCGATCTTTATTTCTTCTATACTGCACATGG
GCTTGAATATTATGTATGGGGACGGAAGTCGAGATTGCTCGCTAGCTGTTAATACTTCAT
GCGTGCACTGGCATCCAGCTTTAAAAAATAGCTTGCCATCACCTAGCTTAGCCAGCTCTG
AGGTCCTTCTACCTCTTATTTTATATTGTAACAATGCACACAAGCACGAAGTGGCTTTGA
ATGCCACGTGAAGAGGATCCATCTGTGGAGGAGTATGTGTGTAAATTAGTGGCTCTCTCT
TCACCACAACATGGGACACCCGTATGCTGCGGCGGCTCTCAAGCTGCCTGTGTCACTAAT
TACTGCTGCTTGCCTTAATAAGCTGAACTGAACAGATAATTATGCAAGTATATGTCTGTA
ACCCTAAGTAGCAGCATGCGTCATGCCATCCATGGCTGTCCTCGCTGGTTAGAGGATTAG
ACCAACTTGCTGTCATAAGCTCCAGAGGCTAGTAACACCTGCTATGCTAGCTTCTTCAGA
ACTCTCTCTATATAAGTGGCTGCCGGCCTACACGTTTCATGCATAGCCAGATCGAGCTAG
GCATCCCAGCTAGCTATCCAGAACGGAAACCCTAGCTGTTTAGTCCTTCTCCATCTCCTA
AACAACGATTACACCGCTCTCACGCTCAGTGACACGAAGCTAGATAGCTATCTAACTCAG
TCCATCGAAGGATTAATTAGATGGCTCAGGCGGCAAGCAAGCGCAGTGCTTTGCTCCGGC
CAGTGATGTACGAGGATGAGCCTTCCTCAATGTCCCTCGAGCTATTCAGCCACGGTATCG
TCGTGGACGGTGACGAGGCTGACGGTGGCTCTGCTGCGGCAGCCCTCTCGCTGCACCTCG
CTTTCGACGACGACAACTTCAAGGGCGGGTGTGACGCCTCGGCTGATTACTACAGCAGCT
GGGCTGCCTACGATGGCTCGGGCGCCACATCCAGCTCGAGCTCGTCGGTGCTCAGCTTCG
AGCAGGCTGGCAGCGGCGGACAGCATCACCTGGCCTATGGCGAAGACGGGTGCGCTTTCT
GGATGGACCCAGCCGCTGGCATGGTGGAGCATCCGGCACAGCAGCAGCGCAGATCCGGCT
GCAACTTCGGACTCATCGTCAGCCCAGGAAGCTCGCCTGATGATGCCGGCTTACACATCC
AGGAGCCGGGCGCCGTCCAGCTGCCGGCTAAGCCCCCGCACAAGCGTGCACGCCGGGATG
GTGAAGTGCAAGCGGCAGCGGCGAAGAAGCAGTGTGGTGGCGGGGCCAGGAAGAGCAAGG
CCAAGGCTGCTCCTGCTCCTACCAAGGACCCTCAAAGCGTAGCTGCAAAGGTTCGAAGAG
AGAAGATTGCCGAGAAGCTCAAGGTCCTGCAAGATCTCGTGCCCAATGGCACCAAGGTGG
ACTTGGTCACCATGCTAGAGAAGGCGATCACCTATGTTAAGTTTCTCCAGCTGCAAGTGA
AGGTGTTGGCTGCCGATGAGTTCTGGCCTGCACAAGGAGGCAAGGCACCAGAGCTCTCTC
AAGTGAAGGACGCCTTGGATGCCATCCTGTCATCCCAGCAGTACCCTAAATAATGAGCTC
GTGCACTGCTGCGTTTTAGTTTCTCTAGAAGCCTAATAAGATGGTAAAGTTGTTAATTAG
GAGATCTATCTATGCATGGTGTATGGCCGGCGAAGAACAGGCCAGCAAACAAATTAGTAC
AGGAAACAGGACAACTTCTGAAGAGAGTGACGGTTAAGTTATTGCCTGAAGTTAATTTAG
CGGTGAATAATATTTCAGTCGTATACTAGTATGGTCGATCTTTTTTTTCTCAATCCTTTT
TTCAAGATAATCACATCTTGTTTTGTATCACAGTTACGTTATCTGAATATAT