Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00419
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:8369348:8379584:1 gene:SORBI_3003G095500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTTCCTGGTGCAGCACGGCAAGAGCAGAGCCGTCGGCGCGAGGAAGCCGAGGCAC
GTCGCCAGGATCCCGACCAAGCTGGAGCTCAGGCACAGGCAGCTCGCCGCCAGGCTTCTC
CCGGCGTGCCTGCTCGCCCCGGTGCTCTGCATCTGCGCGGCCAGGCTCTTCTCCGTCGTC
CTGCCGTCGCAACTCTCGCCTGGCAATGGAGTTTACCTTGCAGAGGGAAACCATGTTATC
TCTGACGATGCTGAAGCGGCTGGAGCTCTGAGCTCCTTGCAGCAGGGCTCTGTGGACGAC
AGACATCGACTTCAAGAACCTAGTGCTCAGGTTCCTGCAAGATTGGGTGCTGATCCTGTC
AGGGGTTCACCAAAATTAGATATTGAAGTTGAAAGCAGCAACTCCAAGCATATAACAGAT
TTGGATAATAAATCAGGAATGAAGGGGCTGGCTATATCTTCAACAAATGCTAGTTCCCCA
CCCGAAAACTCCATCGTGAGTTCCCGACAATCAGTTACAGATACTGAAGTTCCAAAGCCT
AAGAGCAAGATATACTGTGACGACAAGAGTAAAGATGATGGCTTCCCTTATGCAAGGCCA
ATCATCTGCCAAATGTCTGGTGATGTGCGAGTTTCTCCTGAAAGTTCATCAGTTGCTCTT
AATACGCCAATGCTACAAGGCGAGGAAGAGCGGCGGATTACCCCATATGCTCGCAAGGAC
GATTCCTTGCTATCCCTTGTAAGAGAAGTGGTCATCAGAGCAGTTGCAAATGAAAATGAT
GCTCCCAAATGCAGCATCAGCCATGATGTCCCAGCAGTTATCTTCTCAGTTGGTGGCTAT
ACCGGAAACTTCTTCCACGACATGTCTGATGTGCTGATCCCACTATATCTAACTTCCTTT
CAGTATAAAGGTCGAGTAAAATTCTTCATTACAAACTACAAGCAGTGGTGGATTCAGAAA
TATAAACCAGTGCTACGGAGGCTATCGCATCACGACATAATCGATTTTGACTCTAACAAG
GATGTCCACTGTTTTCAGCATGTAATCCTCGGCCTGACGAGGGATAGGGATCTCATCCTT
CGGCCACATCCCACGAGAAACCCAAAGGGGTACTCGATGCTTGACTTCACAAGATTCTTG
CGCCACTCATATGGCCTCAAAAGGAACAGGCCATTGGTCCTCGGTGAGCAGCCTGGCAAG
AAACCAAGAATGCTGATCATATCAAGGCGAGGCACGAGGAAGCTATTGAACCTTCGTCAA
GTGGCAGCCACATCAAGGGCGTTAGGCTTTGACGTGATCATCTCCGAGGCCAGGGGAAAC
TTGAAGAGGTTTGCAACAATGGTGAATTCATGCGACGTGCTCCTAGCAGTCCATGGCGCC
GGCCTCACCAACCAGGTCTTTCTCCCACCACAGGCGGTGGTGGTCCAGATAGTTCCATGG
GGGAAGATGGACTGGATGGCCACCAACTTCTACGGGCAGCCAGCGCGTGGCATGAACCTG
AGGTACCTGGAGTACTACGTCTCTGAAAAAGAGAGTAGCCTTGCTCAGAGGTACCCAAGA
GACCACTTGGTGTTCAAGGACCCCATGGCAATCCATGGTCAGGGATGGAATGCGTTGGCA
GACATTTTTATGGCACAGGATGTGAAACTAAATATCAGGAGATTCAGGCCTACACTTTTA
CAGGTTCTGGACCTTCTTCAGGTCTAG

Peptide Sequence

PEP ID

EES00419
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:8369348:8379584:1 gene:SORBI_3003G095500 transcript:EES00419 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAFLVQHGKSRAVGARKPRHVARIPTKLELRHRQLAARLLPACLLAPVLCICAARLFSVV
LPSQLSPGNGVYLAEGNHVISDDAEAAGALSSLQQGSVDDRHRLQEPSAQVPARLGADPV
RGSPKLDIEVESSNSKHITDLDNKSGMKGLAISSTNASSPPENSIVSSRQSVTDTEVPKP
KSKIYCDDKSKDDGFPYARPIICQMSGDVRVSPESSSVALNTPMLQGEEERRITPYARKD
DSLLSLVREVVIRAVANENDAPKCSISHDVPAVIFSVGGYTGNFFHDMSDVLIPLYLTSF
QYKGRVKFFITNYKQWWIQKYKPVLRRLSHHDIIDFDSNKDVHCFQHVILGLTRDRDLIL
RPHPTRNPKGYSMLDFTRFLRHSYGLKRNRPLVLGEQPGKKPRMLIISRRGTRKLLNLRQ
VAATSRALGFDVIISEARGNLKRFATMVNSCDVLLAVHGAGLTNQVFLPPQAVVVQIVPW
GKMDWMATNFYGQPARGMNLRYLEYYVSEKESSLAQRYPRDHLVFKDPMAIHGQGWNALA
DIFMAQDVKLNIRRFRPTLLQVLDLLQV

Transcript Sequence

Transcript ID

EES00419
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:8369348:8379584:1 gene:SORBI_3003G095500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGCCCATGCTCTCCACTGTGACCGAACCCGCCCACTCGGCCACACGTACATGTGGCAAT
GCCACACTGACACCCCACGACCTCGCAACACTTCTCACTTCTCCGATGCTCTTTTACTCC
GATGCTCCCTCCCGAAAACCCGCAGGCGCAGCTGATGATTAGCTGAGCGCCTGAGCCATG
GCGTTCCTGGTGCAGCACGGCAAGAGCAGAGCCGTCGGCGCGAGGAAGCCGAGGCACGTC
GCCAGGATCCCGACCAAGCTGGAGCTCAGGCACAGGCAGCTCGCCGCCAGGCTTCTCCCG
GCGTGCCTGCTCGCCCCGGTGCTCTGCATCTGCGCGGCCAGGCTCTTCTCCGTCGTCCTG
CCGTCGCAACTCTCGCCTGGCAATGGAGTTTACCTTGCAGAGGGAAACCATGTTATCTCT
GACGATGCTGAAGCGGCTGGAGCTCTGAGCTCCTTGCAGCAGGGCTCTGTGGACGACAGA
CATCGACTTCAAGAACCTAGTGCTCAGGTTCCTGCAAGATTGGGTGCTGATCCTGTCAGG
GGTTCACCAAAATTAGATATTGAAGTTGAAAGCAGCAACTCCAAGCATATAACAGATTTG
GATAATAAATCAGGAATGAAGGGGCTGGCTATATCTTCAACAAATGCTAGTTCCCCACCC
GAAAACTCCATCGTGAGTTCCCGACAATCAGTTACAGATACTGAAGTTCCAAAGCCTAAG
AGCAAGATATACTGTGACGACAAGAGTAAAGATGATGGCTTCCCTTATGCAAGGCCAATC
ATCTGCCAAATGTCTGGTGATGTGCGAGTTTCTCCTGAAAGTTCATCAGTTGCTCTTAAT
ACGCCAATGCTACAAGGCGAGGAAGAGCGGCGGATTACCCCATATGCTCGCAAGGACGAT
TCCTTGCTATCCCTTGTAAGAGAAGTGGTCATCAGAGCAGTTGCAAATGAAAATGATGCT
CCCAAATGCAGCATCAGCCATGATGTCCCAGCAGTTATCTTCTCAGTTGGTGGCTATACC
GGAAACTTCTTCCACGACATGTCTGATGTGCTGATCCCACTATATCTAACTTCCTTTCAG
TATAAAGGTCGAGTAAAATTCTTCATTACAAACTACAAGCAGTGGTGGATTCAGAAATAT
AAACCAGTGCTACGGAGGCTATCGCATCACGACATAATCGATTTTGACTCTAACAAGGAT
GTCCACTGTTTTCAGCATGTAATCCTCGGCCTGACGAGGGATAGGGATCTCATCCTTCGG
CCACATCCCACGAGAAACCCAAAGGGGTACTCGATGCTTGACTTCACAAGATTCTTGCGC
CACTCATATGGCCTCAAAAGGAACAGGCCATTGGTCCTCGGTGAGCAGCCTGGCAAGAAA
CCAAGAATGCTGATCATATCAAGGCGAGGCACGAGGAAGCTATTGAACCTTCGTCAAGTG
GCAGCCACATCAAGGGCGTTAGGCTTTGACGTGATCATCTCCGAGGCCAGGGGAAACTTG
AAGAGGTTTGCAACAATGGTGAATTCATGCGACGTGCTCCTAGCAGTCCATGGCGCCGGC
CTCACCAACCAGGTCTTTCTCCCACCACAGGCGGTGGTGGTCCAGATAGTTCCATGGGGG
AAGATGGACTGGATGGCCACCAACTTCTACGGGCAGCCAGCGCGTGGCATGAACCTGAGG
TACCTGGAGTACTACGTCTCTGAAAAAGAGAGTAGCCTTGCTCAGAGGTACCCAAGAGAC
CACTTGGTGTTCAAGGACCCCATGGCAATCCATGGTCAGGGATGGAATGCGTTGGCAGAC
ATTTTTATGGCACAGGATGTGAAACTAAATATCAGGAGATTCAGGCCTACACTTTTACAG
GTTCTGGACCTTCTTCAGGTCTAGCATGATAGAGACATAACAGTTTTGTTTTCTTCCTTG
TATCATATAATGTTCATTCTTTGTCAGTTAATTCTTTTTTCTGACACAAAATTAATATAG
TTGTAACCATTTGTTTGTTTTAGCTTGTTGCTTTCAGTAGTCGTCATTGTATACGACCCT
CTTGCTCTTGGATCCCGTCGCTCAGTTGTTCACTTTGTACTACCCAGTCTAGATTATTAT
TCTTTTTAATATAATCCGCAGCTCTTATGTCTCATTCTTTCAAAAGAAAATGTAATTGTA
AACTTATATTGTGTAATAG