Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00343
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:6599803:6604261:1 gene:SORBI_3003G077400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGTTCCTTGCCGCCGTCGCAGGCGGCCGCCGCGGCGTACGGGTGCTTCCACCGCCTC
CTGCTCGCTTCTACCACCGTGCCGGCGAGGAGTGGGTGCGTGGGGCGCGCACGCAGACTC
ACGCTCGCGCTCCGCTGCCTACCGATTGCCGGGCACAGGCTGAGGAGTCGAAAGGTTGCG
TGCCAAGCGATGACTGAGACCGAGTCCGAGGGCGACGGCGACAAGGAGGAGAAAAAAGAG
TTTGGAGATGATGCTTCATCACCTTCGGTTGATAGTGTTGCAGAAGCAAATGGACCTGCA
GAAAGTGACTCCAGTATAGACAATAAGAAAGATGAAACCGCGAATGCAGAACTGCTGAGC
TCCAGCGACACGGTTCAAAATGTGGATGGAGATGCTACTTCTACCAATGATGTACAGGAA
AATGTGGAAGTTATTGAAGTTGTTAGCGGATCTCCATTGCCAGGAATGAAGCAACAGCTT
GATGATTCTGTCAGGATCCCCAAGGCTACAATAGACATTCTAAAGGATCAAGTTTTTGGA
TTTGACACATTTTTTGTGACAAGTCAGGAACCTTACGAGGGTGGAGTATTATTCAAGGGA
AATCTTCGTGGTAAACCAGCCAAAAGCTATGAGAAGATCACAAATCGGCTTCAGAACAAA
TTTGGTGATGAATATAAGCTTTTTCTTCTCATCAACCCAGAGGATGAGAAACCAGTTGCT
GTGGTTATACCCAAGCAGACATTACAGCCTGAAACTACAGCGCTCCCAGAATGGTTTGCT
GCTGCTTCATTTGGAATAGTTACCATCTTCACTTTGCTACTTCGAAATGTACCTGTTCTA
CAGGACAACTTGCTATCAACATTTGACAACCTTGAGTTGTTGAAAGATGGACTATCTGGT
GCTCTAGTAACTGCCCTTATAATAGGGGTCCATGAAATTGGACATATCCTTGCTGCCAGG
GAAAGTGGAATCAAGCTTGGTGTGCCATATTTTGTTCCTAGTTGGCAGATAGGATCTTTC
GGTGCAATTACCAGAATTGTCAATATTGTCCGCAACCGTGAGGACCTACTGAAGCTAGCA
GCTGCTGGACCATTGGCCGGGTTTTCCTTTGGATTTGTTCTTTTGCTGCTGGGCTTCATC
TTACCTCCAAGTGATGGCCTTGGTCTTGTGATAGATCCAACTGTCTTCCATGAATCATTC
CTTGTTGGCGGTCTCGCAAAGCTTCTTCTTGGAGATGTTCTAAAAGAAGGAACAGAGTTA
TCCATAAACCCACTTGTTTTATGGGCCTGGGCTGGTCTCCTGATCAATGCTATCAATAGC
ATACCAGCTGGAGAGCTTGATGGTGGTCGCATAGCATTGGCCATATGGGGAAGAAAGATA
TCGTCTCGGGTCAGCAGCCTTGCCATTGGGTTGCTTGGGATCTCGGCTCTCTTCAACGAT
GTTGCCTTCTACTGGGTGGTGTTGATCTTCTTCCTGCAGAGGGGCCCGATTGCTCCTCTC
TCTGAGGAAATCACAGACCCTGAGAGCAACTACATTGGCATCGGTGTTGCCATTTTGTTA
TTTGGGCTTCTGGTCTGCCTGCCTTACCCATTCCCCTTTGACCCGTCGCAATTAACTGAT
ATGGATTTCAACTTTTGA

Peptide Sequence

PEP ID

EES00343
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:6599803:6604261:1 gene:SORBI_3003G077400 transcript:EES00343 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSLPPSQAAAAAYGCFHRLLLASTTVPARSGCVGRARRLTLALRCLPIAGHRLRSRKVA
CQAMTETESEGDGDKEEKKEFGDDASSPSVDSVAEANGPAESDSSIDNKKDETANAELLS
SSDTVQNVDGDATSTNDVQENVEVIEVVSGSPLPGMKQQLDDSVRIPKATIDILKDQVFG
FDTFFVTSQEPYEGGVLFKGNLRGKPAKSYEKITNRLQNKFGDEYKLFLLINPEDEKPVA
VVIPKQTLQPETTALPEWFAAASFGIVTIFTLLLRNVPVLQDNLLSTFDNLELLKDGLSG
ALVTALIIGVHEIGHILAARESGIKLGVPYFVPSWQIGSFGAITRIVNIVRNREDLLKLA
AAGPLAGFSFGFVLLLLGFILPPSDGLGLVIDPTVFHESFLVGGLAKLLLGDVLKEGTEL
SINPLVLWAWAGLLINAINSIPAGELDGGRIALAIWGRKISSRVSSLAIGLLGISALFND
VAFYWVVLIFFLQRGPIAPLSEEITDPESNYIGIGVAILLFGLLVCLPYPFPFDPSQLTD
MDFNF

Transcript Sequence

Transcript ID

EES00343
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:6599803:6604261:1 gene:SORBI_3003G077400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTGTTTTCCCTCCGACGAGGCGGAGGAGAATCCGAGAATGGGATAAGGCCACGCCGCGC
GCGCTCTCCTCTCCGCCACTTTCACCACCGCCTCTGCCCGCCATGAGTTCCTTGCCGCCG
TCGCAGGCGGCCGCCGCGGCGTACGGGTGCTTCCACCGCCTCCTGCTCGCTTCTACCACC
GTGCCGGCGAGGAGTGGGTGCGTGGGGCGCGCACGCAGACTCACGCTCGCGCTCCGCTGC
CTACCGATTGCCGGGCACAGGCTGAGGAGTCGAAAGGTTGCGTGCCAAGCGATGACTGAG
ACCGAGTCCGAGGGCGACGGCGACAAGGAGGAGAAAAAAGAGTTTGGAGATGATGCTTCA
TCACCTTCGGTTGATAGTGTTGCAGAAGCAAATGGACCTGCAGAAAGTGACTCCAGTATA
GACAATAAGAAAGATGAAACCGCGAATGCAGAACTGCTGAGCTCCAGCGACACGGTTCAA
AATGTGGATGGAGATGCTACTTCTACCAATGATGTACAGGAAAATGTGGAAGTTATTGAA
GTTGTTAGCGGATCTCCATTGCCAGGAATGAAGCAACAGCTTGATGATTCTGTCAGGATC
CCCAAGGCTACAATAGACATTCTAAAGGATCAAGTTTTTGGATTTGACACATTTTTTGTG
ACAAGTCAGGAACCTTACGAGGGTGGAGTATTATTCAAGGGAAATCTTCGTGGTAAACCA
GCCAAAAGCTATGAGAAGATCACAAATCGGCTTCAGAACAAATTTGGTGATGAATATAAG
CTTTTTCTTCTCATCAACCCAGAGGATGAGAAACCAGTTGCTGTGGTTATACCCAAGCAG
ACATTACAGCCTGAAACTACAGCGCTCCCAGAATGGTTTGCTGCTGCTTCATTTGGAATA
GTTACCATCTTCACTTTGCTACTTCGAAATGTACCTGTTCTACAGGACAACTTGCTATCA
ACATTTGACAACCTTGAGTTGTTGAAAGATGGACTATCTGGTGCTCTAGTAACTGCCCTT
ATAATAGGGGTCCATGAAATTGGACATATCCTTGCTGCCAGGGAAAGTGGAATCAAGCTT
GGTGTGCCATATTTTGTTCCTAGTTGGCAGATAGGATCTTTCGGTGCAATTACCAGAATT
GTCAATATTGTCCGCAACCGTGAGGACCTACTGAAGCTAGCAGCTGCTGGACCATTGGCC
GGGTTTTCCTTTGGATTTGTTCTTTTGCTGCTGGGCTTCATCTTACCTCCAAGTGATGGC
CTTGGTCTTGTGATAGATCCAACTGTCTTCCATGAATCATTCCTTGTTGGCGGTCTCGCA
AAGCTTCTTCTTGGAGATGTTCTAAAAGAAGGAACAGAGTTATCCATAAACCCACTTGTT
TTATGGGCCTGGGCTGGTCTCCTGATCAATGCTATCAATAGCATACCAGCTGGAGAGCTT
GATGGTGGTCGCATAGCATTGGCCATATGGGGAAGAAAGATATCGTCTCGGGTCAGCAGC
CTTGCCATTGGGTTGCTTGGGATCTCGGCTCTCTTCAACGATGTTGCCTTCTACTGGGTG
GTGTTGATCTTCTTCCTGCAGAGGGGCCCGATTGCTCCTCTCTCTGAGGAAATCACAGAC
CCTGAGAGCAACTACATTGGCATCGGTGTTGCCATTTTGTTATTTGGGCTTCTGGTCTGC
CTGCCTTACCCATTCCCCTTTGACCCGTCGCAATTAACTGATATGGATTTCAACTTTTGA
GAGAAGGAAACAAGAGTTACAACTCACCGGCTTCTCCTCCAATTGTACCAATGAGGTGTA
TTTAACCTGTCGGCTCTGTATTCTGCTGTCATCTTTGCTCCATTGCTCCTTGTAGTAGCC
AATAAAAGCAGGAGCGTTTCTTGTGGCAGCTTGCCTGTTGTGTTAGTAGGTTGGTCGATC
AGAGTAGAATTAAGTATGTATGTTATTTTGGCGGTAACTGTTATCTGTCAATTGTGGCAT
AGTATGAATGTATGATTCTATCAGATTCGTGGTCAAAGTATGAATGTATGATTCT