Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00246
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:4987555:4991981:1 gene:SORBI_3003G055600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGGGGCCGCAGTACGATCTCGTCGGGAACCCACTGGGCGCGGTGCGCGCCACCTTC
GAGAGGACGGCTGCCGCCGCGGCGGCGGAGTCCGGAGGAGCCGACCCTGTGGCGGCCTTC
CGGGGGAAGGATTGGGGCGCTGGCGACCTCTTCCGCTCCTTCCTCTTCGAGCAAGACGGC
CTTGGCAAGGTTCCGGTGTTGGATGCATCAAATCTTGGATTGATCAAACCAAACACCCTG
GTCCGGTACCGGGGAATGGTCCAGGATATGCTTGGGAATGAGTACTACATTGGTGCTTTC
AAGGATGGGTCAACTTGGAGGACAAACAAGTTCACTGACGTCTCACCGTTCTCAATGCCG
CATCCTTGTGATTCGCATCTTTGGGAGCGCCATCTCTTCCACTGTGTGCCTGCACCTGGA
CAAAATTCTTGGACACTGGAGTCTTCACCAGGACCTGATGTTCGCAGGATGACAAACTGC
TTGGCACCTGAATTAAGAGAGAAAAGGAAGAGAGATGGGGATGATGATACTATGGATGTT
TCAGAAAATGGGCACAGAGAGTCTTCTTCATTCTGCAAGAAGCCGAAGGAAGGCGATGCT
CATGTCTCATCCAGTTCAACTGAAGTGGCAGGAACTGTTCCAGAGATGAATGGAGGCGAT
CATCATATACCTGGAAGTTCCTTTTCATGTCTGGTGAAGATCTATGATATGCCTGAAAGT
CAAGTGAAGCTAAATGATGTTATTGAGTTTATTGGTGTATATACATTTGACCCAGAACTT
GCTGCTCCTAGTGACAACCCAGATGACATAATGTTAGACCTCATGGAAGATGTAACAGTT
CAGTTGCCCCCGAGCAAGGTGCCACGTCTTCACTGTTTGGTATGGAGAAAATTATCATCC
CACGATTATATTTCAAGGCCTGTTGTTGAGCCTTCACCTAGCCTGTTAAAAGGCATTCGG
CAATCTTTGCTCTCTCACCTCACCCTCGTGTTAGGCAATGATGAACTTGCAGCCCAGTGC
TTGCTATTGCATCTTCTATCCAGACTTCGCAATAGGGTGGACGTGGTCACTGTTGGCAGA
CTCTCCTTGAATTTCACTGGCTTCAACAAGGAAAGTGCTTCCATATTTGGGAATCAACTG
TATTCTTTAATCCAGAAATTGGTGCCATATTCACAAGCCATACCTCTGTCAATTGACTAT
CTCAACACAGCCACACTTCAACCTAGAAAGGACAACAAGTCAGGAAGGTTGGTCACAGGA
GTTCTGCAGCTACCTCAAGGCACTCATCTGACCTTTGATGAGACTCTTCTGCAGACAGGG
TCATTGACATCTAAAGGTGTGGAAAATACCATGCTGCTCAAGAATCTGATGGAGTCGCAG
AAGGTTGACTACGATTTTGAGTACTACAAGCTGGAAATGGCAGCTGATGTGCAGCTACTT
ACTCTCTCTGAGGGAAAATCAAACATCCTTCCTTCAGACTTGGTAGTGCCTTTCCGGCCA
TCCTCTGTTCCCACAGTTAATGCAGGTGCTGAGGAAACTGAGAGTTGGAGGTGGTATTTG
GCCACAGTAAGGTCTCTTCCTCAGTCCACTGAACCTGAGACCTACCAGATGATTCAAGAT
GAAATGGTCAGTGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGGTGG
CTAACAATGGCACAAATAATGGCCTCAAGCTTTGGTGAGAAGAGTCTTTCTTTGGAGCAT
TGGCAGATGGTGAAGGAGCTTGAGAGGCTTAGAAAGCAGAGGATGCAATGA

Peptide Sequence

PEP ID

EES00246
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:4987555:4991981:1 gene:SORBI_3003G055600 transcript:EES00246 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVGPQYDLVGNPLGAVRATFERTAAAAAAESGGADPVAAFRGKDWGAGDLFRSFLFEQDG
LGKVPVLDASNLGLIKPNTLVRYRGMVQDMLGNEYYIGAFKDGSTWRTNKFTDVSPFSMP
HPCDSHLWERHLFHCVPAPGQNSWTLESSPGPDVRRMTNCLAPELREKRKRDGDDDTMDV
SENGHRESSSFCKKPKEGDAHVSSSSTEVAGTVPEMNGGDHHIPGSSFSCLVKIYDMPES
QVKLNDVIEFIGVYTFDPELAAPSDNPDDIMLDLMEDVTVQLPPSKVPRLHCLVWRKLSS
HDYISRPVVEPSPSLLKGIRQSLLSHLTLVLGNDELAAQCLLLHLLSRLRNRVDVVTVGR
LSLNFTGFNKESASIFGNQLYSLIQKLVPYSQAIPLSIDYLNTATLQPRKDNKSGRLVTG
VLQLPQGTHLTFDETLLQTGSLTSKGVENTMLLKNLMESQKVDYDFEYYKLEMAADVQLL
TLSEGKSNILPSDLVVPFRPSSVPTVNAGAEETESWRWYLATVRSLPQSTEPETYQMIQD
EMVSAMRDDRSLGCSELSRWLTMAQIMASSFGEKSLSLEHWQMVKELERLRKQRMQ

Transcript Sequence

Transcript ID

EES00246
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:4987555:4991981:1 gene:SORBI_3003G055600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATAAAAGAATACAATTCTTGGATTTTAATGAGTCAAACAATTTGAACTTTGACTAAATT
TATATTAAAAAGTATATTTTTTTATACAAAATAAGTATCATTAAAATAGTTATAGAATAT
ATTTTTATAATAAATTTATTTAGAGATATAAAAATTAATATTATTTACTATAAAGTTGGT
CAAACTTGAACTCTATTGACAGGTATGGATACCATAATTGCATTTTCTTTGGACGGAGAG
TATTAAGGTTGCATTTTTTTTTGACACAAGGGTTCCTGGACGGAAATATTTTAGGCCCAT
GTCATTTCTTCCAAGAAGGTTCAGACTGGGCCTTCATAGTCATAGGTCTAGACATTGTGG
ATATTGGCCCATTTAGAACTGGGCCTACTTCGGCTCAAGAGACTTACTTACCCAGCCCAA
GCCCAAGAGCGATGGCGGGAAGAGGGCAGGAAACGGCGGGAAGCGCCGCCGCCAGTGGCG
CCAAAACCCCAGCCGCTATAACACCCCTCCCTCCCCTCAGTCCTCTCGTCCCCTCGCCTG
CCCACCTCACCCCGCCGTTGCTCCCGAGTCCCAAACCCCAGCGCGAGAGAAGAAGAGAGG
GAGATGGTGGGGCCGCAGTACGATCTCGTCGGGAACCCACTGGGCGCGGTGCGCGCCACC
TTCGAGAGGACGGCTGCCGCCGCGGCGGCGGAGTCCGGAGGAGCCGACCCTGTGGCGGCC
TTCCGGGGGAAGGATTGGGGCGCTGGCGACCTCTTCCGCTCCTTCCTCTTCGAGCAAGAC
GGCCTTGGCAAGGTTCCGGTGTTGGATGCATCAAATCTTGGATTGATCAAACCAAACACC
CTGGTCCGGTACCGGGGAATGGTCCAGGATATGCTTGGGAATGAGTACTACATTGGTGCT
TTCAAGGATGGGTCAACTTGGAGGACAAACAAGTTCACTGACGTCTCACCGTTCTCAATG
CCGCATCCTTGTGATTCGCATCTTTGGGAGCGCCATCTCTTCCACTGTGTGCCTGCACCT
GGACAAAATTCTTGGACACTGGAGTCTTCACCAGGACCTGATGTTCGCAGGATGACAAAC
TGCTTGGCACCTGAATTAAGAGAGAAAAGGAAGAGAGATGGGGATGATGATACTATGGAT
GTTTCAGAAAATGGGCACAGAGAGTCTTCTTCATTCTGCAAGAAGCCGAAGGAAGGCGAT
GCTCATGTCTCATCCAGTTCAACTGAAGTGGCAGGAACTGTTCCAGAGATGAATGGAGGC
GATCATCATATACCTGGAAGTTCCTTTTCATGTCTGGTGAAGATCTATGATATGCCTGAA
AGTCAAGTGAAGCTAAATGATGTTATTGAGTTTATTGGTGTATATACATTTGACCCAGAA
CTTGCTGCTCCTAGTGACAACCCAGATGACATAATGTTAGACCTCATGGAAGATGTAACA
GTTCAGTTGCCCCCGAGCAAGGTGCCACGTCTTCACTGTTTGGTATGGAGAAAATTATCA
TCCCACGATTATATTTCAAGGCCTGTTGTTGAGCCTTCACCTAGCCTGTTAAAAGGCATT
CGGCAATCTTTGCTCTCTCACCTCACCCTCGTGTTAGGCAATGATGAACTTGCAGCCCAG
TGCTTGCTATTGCATCTTCTATCCAGACTTCGCAATAGGGTGGACGTGGTCACTGTTGGC
AGACTCTCCTTGAATTTCACTGGCTTCAACAAGGAAAGTGCTTCCATATTTGGGAATCAA
CTGTATTCTTTAATCCAGAAATTGGTGCCATATTCACAAGCCATACCTCTGTCAATTGAC
TATCTCAACACAGCCACACTTCAACCTAGAAAGGACAACAAGTCAGGAAGGTTGGTCACA
GGAGTTCTGCAGCTACCTCAAGGCACTCATCTGACCTTTGATGAGACTCTTCTGCAGACA
GGGTCATTGACATCTAAAGGTGTGGAAAATACCATGCTGCTCAAGAATCTGATGGAGTCG
CAGAAGGTTGACTACGATTTTGAGTACTACAAGCTGGAAATGGCAGCTGATGTGCAGCTA
CTTACTCTCTCTGAGGGAAAATCAAACATCCTTCCTTCAGACTTGGTAGTGCCTTTCCGG
CCATCCTCTGTTCCCACAGTTAATGCAGGTGCTGAGGAAACTGAGAGTTGGAGGTGGTAT
TTGGCCACAGTAAGGTCTCTTCCTCAGTCCACTGAACCTGAGACCTACCAGATGATTCAA
GATGAAATGGTCAGTGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGG
TGGCTAACAATGGCACAAATAATGGCCTCAAGCTTTGGTGAGAAGAGTCTTTCTTTGGAG
CATTGGCAGATGGTGAAGGAGCTTGAGAGGCTTAGAAAGCAGAGGATGCAATGAGATGAT
GCATCATTAGCATGTGTTTTTACACTCTAAATGTTATTATGGTGGTATGCTGTTATGTGT
ATAGTACTGGATGTGTGAATCAAGACATGGATCCAAGTCATTTCGTAACAACTAACAACT
TCTATGATCCTATGGATGCTATGATGATGTCTGCTGTGCATTTTTTTGCTCAAATTTGAA
ATTTACTCTGGT