Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00230
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:4681151:4686500:1 gene:SORBI_3003G052000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGCGAGCAAACCGACAGCTCCAGAGGAGGAGGAAGAAGAAGAAGAACAAGAGGTGGG
ATACAGACAACGAGGAGAACGACGAGCACCGACCGCGACCGCGACGCCATCACCCCCTCC
TCCACCTCGTGCTACAAAGCAATAATCATCCGAGGTCGGCCCATGGCTGCTGCTGCTTCT
TCTTCTTCTACTACTAGTTGCAGCCGCGGCCGAACGCTCCCAATCATTGCCTCCCTTGTC
CCCTTCCTCCTCCTCGTCGTCGCCTCGTGCCCGGCCGCCCTGGCCTCCGCCACGCACGGA
CACGGCGGCGGCGGCAGGAAGCATGCCGCGGTGCGGGCGAATCACCAGGCGGTGTTCCGT
GCCGGGGACGAGCGGGAGGCGTACAGGAGGATCATGGCGCGCATGGCCAGGATGGCCAAG
GATTCCAACATGACAATCCAGAGCCCCGACGGCGACGTCATCCACTGCGTGCCGGCGCAC
CTGCAGCCGGCGTTCGACCACCCCATGCTCAGAGGCCAGAAGCCCGAGGACGAGCCCGTG
GAGAGGCCCATGCCCAAGAGCGGCGCTGCCGAGGAAGAGGAGGAGGAGGCCGGCGTGTTC
CCGCAGGCGTGGAGCGACGGCGGCAAGCGGTGCCCGGCGGGGACGGTGCCGATACGGCGG
ACGACGAAGCGCGACGTGCTGCGGACTAGCTCCGCCCGCCGGTTCGGGATGAAGGCCCGG
GCCAGCAGCAACGCCCGCCGCGACTCCACCAGCAGCGGGCACGAGCACGCGGTGGGGTAC
GTGACGGGGGACCAGTTCTACGGCGCCAAGGCCAGCCTGAACGTGTGGTCGGCCAAGGTG
GCGTCGGCGGCGGAGTTCAGCCTCTCCCAGATCTGGGTCATCTCCGGCTCCTTCGGCAAC
GACCTCAACACCATTGAGGCCGGATGGCAGGTGAGCCCTGAACTGTATGGAGATAGCAAC
CCGAGGTTCTTCACATACTGGACGACGGATGCATACCAGGAGACTGGATGCTACAACCTG
CACTGCTCCGGCTTCGTCCAGACCAACAACCGGATCGCCATTGGAGCTGCCATCTCGCCG
ACCTCCGTTTACAACGGCCGGCAGTTCGACATCAGCCTGCTCATATGGAAGGACCCACAC
CGGGGGAACTGGTGGCTGCAGCTGGGGTCAGGTCCGCTGGTGGGGTACTGGCCGTCGCTG
CTGTTCACGCACCTGGGCGGGCACGCCAACATGGTGCAGTTCGGCGGCGAGGTGGTGAAC
TCGCGCCCGTCGGGGTCGCACACGCCGACGCAGATGGGGAGCGGCCACTTCCCCCGCGAG
GGCTTCAACCGCGCCGCCTACTTCCGCAACGTGCAGGTGGTGGACGGCGACAACAGCCTC
GTCCCCGCCGCCGCGCTCCGCCTCGTCGCCGACCACCCCGGATGCTACGACATCCAGGGC
GCGTACAACCGCGCCTGGGGCAACTACTTCTACTACGGAGGGCCCGGCAGGAACGTGCAC
TGCCCGTGA

Peptide Sequence

PEP ID

EES00230
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:4681151:4686500:1 gene:SORBI_3003G052000 transcript:EES00230 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MREQTDSSRGGGRRRRTRGGIQTTRRTTSTDRDRDAITPSSTSCYKAIIIRGRPMAAAAS
SSSTTSCSRGRTLPIIASLVPFLLLVVASCPAALASATHGHGGGGRKHAAVRANHQAVFR
AGDEREAYRRIMARMARMAKDSNMTIQSPDGDVIHCVPAHLQPAFDHPMLRGQKPEDEPV
ERPMPKSGAAEEEEEEAGVFPQAWSDGGKRCPAGTVPIRRTTKRDVLRTSSARRFGMKAR
ASSNARRDSTSSGHEHAVGYVTGDQFYGAKASLNVWSAKVASAAEFSLSQIWVISGSFGN
DLNTIEAGWQVSPELYGDSNPRFFTYWTTDAYQETGCYNLHCSGFVQTNNRIAIGAAISP
TSVYNGRQFDISLLIWKDPHRGNWWLQLGSGPLVGYWPSLLFTHLGGHANMVQFGGEVVN
SRPSGSHTPTQMGSGHFPREGFNRAAYFRNVQVVDGDNSLVPAAALRLVADHPGCYDIQG
AYNRAWGNYFYYGGPGRNVHCP

Transcript Sequence

Transcript ID

EES00230
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:4681151:4686500:1 gene:SORBI_3003G052000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTATCTCTCTCCTCCATTCCGTGGTGCAATGCACAACACAACACAACACATTTTCTCTCT
TTCATCTGGTCCCTTTCTTTAATTTTTATTCGCTCGTTGTGCGACTACACGCGAGGCCAC
ACTCTATCCAGCCCCACTGTCTCCTCACCAGCCCCGCCAAGCCCCCGACCCCGATCCTCT
TGATGGCGATGACGATGCAGCGGAGACAGAAACGGTGAGGCGTCGCCCACGGTAACCCAG
CTCTCCCTTCTGCTTCTACTATCTCTTGACAGAGGCCGGCCGAGGAATGTGGAGAGTTGA
GAACCCAAATTTCCGCATTCGAATCCACCGTCATCAATTCGGCATTTCTTGCCCCAGCCT
AGCTACCAACCAACTATAGCGCACACACACAGCACGGAGATGTCTTGACCTCGGAGTCGG
AGAGAGCTCCACCTCAACCTCCGCTCCTTCCCCCACGCTACGCGGCTGTATTTATAGCGA
GCGTCCTGGCCTCTCTTCTCCTGCTCGCTCCTGGGGAGGGAAGAAGAAGAGGAAGAGGAC
AAGCACTACGCCAATGCGCGAGCAAACCGACAGCTCCAGAGGAGGAGGAAGAAGAAGAAG
AACAAGAGGTGGGATACAGACAACGAGGAGAACGACGAGCACCGACCGCGACCGCGACGC
CATCACCCCCTCCTCCACCTCGTGCTACAAAGCAATAATCATCCGAGGTCGGCCCATGGC
TGCTGCTGCTTCTTCTTCTTCTACTACTAGTTGCAGCCGCGGCCGAACGCTCCCAATCAT
TGCCTCCCTTGTCCCCTTCCTCCTCCTCGTCGTCGCCTCGTGCCCGGCCGCCCTGGCCTC
CGCCACGCACGGACACGGCGGCGGCGGCAGGAAGCATGCCGCGGTGCGGGCGAATCACCA
GGCGGTGTTCCGTGCCGGGGACGAGCGGGAGGCGTACAGGAGGATCATGGCGCGCATGGC
CAGGATGGCCAAGGATTCCAACATGACAATCCAGAGCCCCGACGGCGACGTCATCCACTG
CGTGCCGGCGCACCTGCAGCCGGCGTTCGACCACCCCATGCTCAGAGGCCAGAAGCCCGA
GGACGAGCCCGTGGAGAGGCCCATGCCCAAGAGCGGCGCTGCCGAGGAAGAGGAGGAGGA
GGCCGGCGTGTTCCCGCAGGCGTGGAGCGACGGCGGCAAGCGGTGCCCGGCGGGGACGGT
GCCGATACGGCGGACGACGAAGCGCGACGTGCTGCGGACTAGCTCCGCCCGCCGGTTCGG
GATGAAGGCCCGGGCCAGCAGCAACGCCCGCCGCGACTCCACCAGCAGCGGGCACGAGCA
CGCGGTGGGGTACGTGACGGGGGACCAGTTCTACGGCGCCAAGGCCAGCCTGAACGTGTG
GTCGGCCAAGGTGGCGTCGGCGGCGGAGTTCAGCCTCTCCCAGATCTGGGTCATCTCCGG
CTCCTTCGGCAACGACCTCAACACCATTGAGGCCGGATGGCAGGTGAGCCCTGAACTGTA
TGGAGATAGCAACCCGAGGTTCTTCACATACTGGACGACGGATGCATACCAGGAGACTGG
ATGCTACAACCTGCACTGCTCCGGCTTCGTCCAGACCAACAACCGGATCGCCATTGGAGC
TGCCATCTCGCCGACCTCCGTTTACAACGGCCGGCAGTTCGACATCAGCCTGCTCATATG
GAAGGACCCACACCGGGGGAACTGGTGGCTGCAGCTGGGGTCAGGTCCGCTGGTGGGGTA
CTGGCCGTCGCTGCTGTTCACGCACCTGGGCGGGCACGCCAACATGGTGCAGTTCGGCGG
CGAGGTGGTGAACTCGCGCCCGTCGGGGTCGCACACGCCGACGCAGATGGGGAGCGGCCA
CTTCCCCCGCGAGGGCTTCAACCGCGCCGCCTACTTCCGCAACGTGCAGGTGGTGGACGG
CGACAACAGCCTCGTCCCCGCCGCCGCGCTCCGCCTCGTCGCCGACCACCCCGGATGCTA
CGACATCCAGGGCGCGTACAACCGCGCCTGGGGCAACTACTTCTACTACGGAGGGCCCGG
CAGGAACGTGCACTGCCCGTGATGCATCCATGGCCGGCGACCATGCATGCGTCGTCGTCA
TGCATGGCATGCTGAACTGACGATGAAGAAGAAAGCAGATACGTGCACAGATACATACAG
AGATCGATCACCACCGTGCGGCCGTGCCGGAGGATGATCTAGTTGGATCGCCGCCGCTCT
CATCAACCGGATATATGGATCGTATAGCAACGGTGTTAGTTATAGCTAGAGCTAGGTCTA
TTAATTATTAGTAGTCCCTCGTTGGTTACTGCATGCTAATGAGTTTTGAGCCCAGCTGCG
TACACGCGCGCGACCGGGCCGGTAGCAGAGGCAAAAAGGTTTCGATTTGATGTATGTGAT
GAGGCTTTCCTTTCATTTGGTCTGATTTTTTTTCTCGAGTTATATGTATACATGAAGAAA
TCCACATAGAGTGTTTTGATCACCATGTATGTGATGACTGATGAGTAAGCGTTTCTTTGG
G