Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00199
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:4128791:4132084:1 gene:SORBI_3003G045000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGAAGCAATTTATTGGAAAGCTGTCGTGGAAGGCGATGAAATCCAGCTCTGGCGGC
GGGGGCACGGGCTCGCCGCCTGCGAAGCTGCCGCCGCACCTACCATCGCCGCGGGAGAAT
GGGGCCTCGCCGCGGGAGAATGGGGCCACGCCGAAGCCCAACGTCTCGCCTCCGTCTCCC
GCGGCGGGAGCCGGAGCCGGGGCCGGAGCCGAGGTGAGGTCTAGGGAGGACGCCTTTGTC
CAGAAGGTTAACATTTGCTGCGCGGTGTACGACTTCTCCGACCGGGGCAAGGACTCGCCG
GAGAAGGAGCGGAAGCGGCAGATGCTCATGTCCCTGGTCGACTGCATTGGCGCTGCTGAG
GAGCCCCTCACGGAGACAATGATAGCAGCGTGCGTGCGCATGTTCGCCGCTAACCTGTTC
AGGGTCTTCCCGCCCAAAGTCCGGTCTGGCACCTCGACTTCGGAGACCGAGGAGGACGAG
CCGTTCTTCGATCCGTCCTGGTACCACTTGCAAGTCGTTTATGAGTTTCTCCTTAGGTTT
GTGACTTCGCCGCTCGTCGATGCTAAGGTGGCTAGGAAGTATGTGGATAGCCCTTTCGTC
TCCAAGCTGCTCGATCTGTTTGATTCGGATGACCCAAGAGAAAGGGACTGCTTGAAGACA
ATATTACATCGGATATATGGCAAGTTCATGGGAAATCGACCATTCATCCGTAAGGCTGTG
AGCAATATCTTCTATAGGTTTGTGTTCGAGACAGATCATCACAATGGGATCGCCGAGCTG
TTGGAGGTCTTTGGCAGTGTAATAAGTGGGTTTGCCAAGCCATTGAAGGAGGAACATAAG
TTGTTCTTATGGAAAGCATTGATACCACTTCATAAGCCGAAATCAGTGGGAGTGTATCTG
CCACAGCTGACATATTGCATCACACAATTTATTGAGAAGGAACCAAAGCTTGCTGGGACT
GTGATCAGAGGCCTGCTAAAGTATTGGCCAGTTACAAATAGTCAGAAGGAAATTATGTTT
TTGGGGGAGTTGGAGGAGGTGCTGGAGTTGACTGACATGGCTGAATTTCAGAAGTGCATG
ACTCCCTTGTTCCGAAAGATTGCTAGTTGCCTGAATAGCTCTCATTTTCAGGTTGCAGAG
AGAGCCTTGTTCCTATGGAACAACGAGCACCTATTCGATATGATCTCCCAAAACCGTCAA
GTGATCCTACCGATTATATATCCAGCTCTGGAGCGGAACACCCGCTGGCACTGGAACCAA
TCAGTCCTCAATGTAACAATGAACGTGCGGAAAATGTTCCGTGAAATGGATGAGAGGCTG
CTTCTAGCCTGCCAAAACAACTTCCAAGAGGAAGAGGAGAAGCGAGCCGCGACTGAGGAG
CGGCGGAGGCTCATGTGGGAGCAGCTGGAGCGGAGCGCTGCTCGTGGGCATCACCAACCT
GTGATCGCCGCAGACGCAAGCTTTCCTGCGCCCCCTTCGTCGGCTCGTCTTGTAGCCCCA
ACCGTGACATGA

Peptide Sequence

PEP ID

EES00199
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:4128791:4132084:1 gene:SORBI_3003G045000 transcript:EES00199 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWKQFIGKLSWKAMKSSSGGGGTGSPPAKLPPHLPSPRENGASPRENGATPKPNVSPPSP
AAGAGAGAGAEVRSREDAFVQKVNICCAVYDFSDRGKDSPEKERKRQMLMSLVDCIGAAE
EPLTETMIAACVRMFAANLFRVFPPKVRSGTSTSETEEDEPFFDPSWYHLQVVYEFLLRF
VTSPLVDAKVARKYVDSPFVSKLLDLFDSDDPRERDCLKTILHRIYGKFMGNRPFIRKAV
SNIFYRFVFETDHHNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKSVGVYL
PQLTYCITQFIEKEPKLAGTVIRGLLKYWPVTNSQKEIMFLGELEEVLELTDMAEFQKCM
TPLFRKIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQ
SVLNVTMNVRKMFREMDERLLLACQNNFQEEEEKRAATEERRRLMWEQLERSAARGHHQP
VIAADASFPAPPSSARLVAPTVT

Transcript Sequence

Transcript ID

EES00199
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:4128791:4132084:1 gene:SORBI_3003G045000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCACCAGCCCACCACCACCCCTCCTCAAAACGCCAAAATTTCCCCACCTCTCCACGCCC
TTTCCCCTCCTCCCGAGATCCCATCCATGGCCGCCTCCCGCCCCCGGATCTGGCGCTGAG
CCCGCCATTGCCGGATCCCTGCCAGGCCTCCTCCCCGCCGTCGCGCTCCCGGCCCGGTTT
TATTGGGCGCGGCGTGGCATTCCCTCTCATCTCGCTGCGTTCACCGGAGGGCGGTGGTTG
ATCTGTACCGGCGGGTGCGGCGCGCCTTGCGATCTCTTGCTGTCGCCGCAGGAGGATCGG
CCGCTCGTCGACGTTGCCAAGCGCGCTCTTTTAAGGCCCGGGGATTCGCGCGCGCCCCGT
GTCCGTGCTGCCGACAGGAGGCCGGGCCTGTCGGAATGGTCGTTTAATTGGGGAGATTTG
ATGTGTTGTTGGTGCTGCCGGATCTCGCCGACATGTGGAAGCAATTTATTGGAAAGCTGT
CGTGGAAGGCGATGAAATCCAGCTCTGGCGGCGGGGGCACGGGCTCGCCGCCTGCGAAGC
TGCCGCCGCACCTACCATCGCCGCGGGAGAATGGGGCCTCGCCGCGGGAGAATGGGGCCA
CGCCGAAGCCCAACGTCTCGCCTCCGTCTCCCGCGGCGGGAGCCGGAGCCGGGGCCGGAG
CCGAGGTGAGGTCTAGGGAGGACGCCTTTGTCCAGAAGGTTAACATTTGCTGCGCGGTGT
ACGACTTCTCCGACCGGGGCAAGGACTCGCCGGAGAAGGAGCGGAAGCGGCAGATGCTCA
TGTCCCTGGTCGACTGCATTGGCGCTGCTGAGGAGCCCCTCACGGAGACAATGATAGCAG
CGTGCGTGCGCATGTTCGCCGCTAACCTGTTCAGGGTCTTCCCGCCCAAAGTCCGGTCTG
GCACCTCGACTTCGGAGACCGAGGAGGACGAGCCGTTCTTCGATCCGTCCTGGTACCACT
TGCAAGTCGTTTATGAGTTTCTCCTTAGGTTTGTGACTTCGCCGCTCGTCGATGCTAAGG
TGGCTAGGAAGTATGTGGATAGCCCTTTCGTCTCCAAGCTGCTCGATCTGTTTGATTCGG
ATGACCCAAGAGAAAGGGACTGCTTGAAGACAATATTACATCGGATATATGGCAAGTTCA
TGGGAAATCGACCATTCATCCGTAAGGCTGTGAGCAATATCTTCTATAGGTTTGTGTTCG
AGACAGATCATCACAATGGGATCGCCGAGCTGTTGGAGGTCTTTGGCAGTGTAATAAGTG
GGTTTGCCAAGCCATTGAAGGAGGAACATAAGTTGTTCTTATGGAAAGCATTGATACCAC
TTCATAAGCCGAAATCAGTGGGAGTGTATCTGCCACAGCTGACATATTGCATCACACAAT
TTATTGAGAAGGAACCAAAGCTTGCTGGGACTGTGATCAGAGGCCTGCTAAAGTATTGGC
CAGTTACAAATAGTCAGAAGGAAATTATGTTTTTGGGGGAGTTGGAGGAGGTGCTGGAGT
TGACTGACATGGCTGAATTTCAGAAGTGCATGACTCCCTTGTTCCGAAAGATTGCTAGTT
GCCTGAATAGCTCTCATTTTCAGGTTGCAGAGAGAGCCTTGTTCCTATGGAACAACGAGC
ACCTATTCGATATGATCTCCCAAAACCGTCAAGTGATCCTACCGATTATATATCCAGCTC
TGGAGCGGAACACCCGCTGGCACTGGAACCAATCAGTCCTCAATGTAACAATGAACGTGC
GGAAAATGTTCCGTGAAATGGATGAGAGGCTGCTTCTAGCCTGCCAAAACAACTTCCAAG
AGGAAGAGGAGAAGCGAGCCGCGACTGAGGAGCGGCGGAGGCTCATGTGGGAGCAGCTGG
AGCGGAGCGCTGCTCGTGGGCATCACCAACCTGTGATCGCCGCAGACGCAAGCTTTCCTG
CGCCCCCTTCGTCGGCTCGTCTTGTAGCCCCAACCGTGACATGAGAATGAGATTGCAACA
AAACGTGCTCCGTTTTCACCACCTTGGTAGCTAAGCTAGATGAAGTTGCTTGCTTCACCG
GGGATGCACAAAGGCATTTTGTTACCTTCTGTATGCATAACCCCCTGTCAAAGTATGTAA
TTAATAGTTGATGGTTTGAGGACAAAGGGACATTTTGAATTTTGCATGGCGTATTCTTGA
AATGGGCATGTGTTTTCTTCTTGCCTGAAATCTTGTCTGATTCTACCAGAGTGCTCTCTG
CTCTGTATATCTGGAGTCTGGACAGTATGCATCGTGGGACTGTGGGAGGATGACAAGTAA
CAAGTTTGCAGCTTTCCTTTTTGTATTTTTCGTGGCAAATAGCTTATGCTTATTTTTTAT
TCTTTTATTTATGTGGAAAAATATGGAGTATGGTGGGAAGGAAACAAGAACAGCTGAGGC
TGGCT