Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00166
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:3689218:3694202:1 gene:SORBI_3003G039300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGATGGCCGGCGCCGCCGCCGCCGGTCGCTGCCTCCTGCTCTCCCGCCCGTCCCCT
TTCCGGCTCCGCCTCCTCCGCGCCGCCCTCTCCACCGCTGCCCCCACCATCGGCCCCACC
TCCACTCCCGCTCCCCCTCCGCGGCACGAGCTCCTCCTCGAGCGCCTCCGCCTCCGCCAC
CTCAAGGACGCCTCCTCCTCCCCCGGCGCCCCGGCGCCCGCCTCGCGGGGCGCGGAGCGG
AGCTCGCAGCAGGGAAAGGGGAAGAGGGTCGAGGCCGCGGAGAGCTTCGAGGAGCTCGGC
CTTGGGGAGGAGGTGATGGCCGCTCTCGGGGAGATGGGCATCTCCAAGCCCACGGAGATC
CAGTGCGTTGGTGTGCCGGCGGTGCTGGCCGGCACCAGCGTCGTGCTCGGCTCCCACACT
GGCTCTGGGAAGACGCTGGCCTACTTGCTCCCTCTTGTTCAGCTACTTCGGCGTGATGAA
GCAATGCTGGGGATATCAATGAAGCCAAGGCGGCCAAGAGCAGTAGTACTCTGCCCCACT
AGGGAGCTCACTGAGCAGGTTTATCGAGTTGCAAAGTCTATCAGCCATCATGCACGTTTT
CGGTCAACGATGGTTAGTGGAGGCACCCGTCTAAGGCCCCAGGAAGATTCTTTGAACATG
CCCGTTGATATGGTTGTTGGTACTCCTGGAAGGATTCTTGATCATATCAAGGATGGTAAC
ATGGTTTATGGCGATATTAAGTATCTGGTTCTGGATGAGGCAGATACAATGTTTGATCAA
GGCTTTGGACCAGACATACGGAAGTTCCTTGCTCCATTGAAGAATCGTGCTGCAAAGCCT
GGTGATCAAGGTTTCCAAACAGTATTAGTCACTGCCACTATGACAAAGGCTGTGCAAAAG
TTGATTGATGAGGAATTTGAAGGTATTGTCCATTTGCGGACATCATCATTTCAAAAGAGA
GTTTCAACAGCACGGCATGACTTTATCAAACTTTCTGGAGCAGAAAACAAACTTGAGGCT
CTTCTGCAGGTTCTTGAGCCAAGCTTGGCAAAGGGAAACAAAGTTATGGTGTTCTGCAAT
ACTTTGAATTCAAGTCGTGCAGTGGACCATTTTCTAACTGAAAATCAGATATCCACTGTT
AACTATCATGGAGAGGTTCCAGCTGAAGAGAGAGTTGAGAACCTGAACAAATTCCGTAAT
GAAGAGGGGGACTGCCCAACATTAGTATGCACTGATCTGGCAGCTAGAGGCCTGGACCTG
GATGTTGACCATGTCATCATGTTTGACTTCCCATCAAATTCGATTGACTACCTTCACAGA
ACTGGAAGAACTGCACGCATGGGAGCCAAAGGGAAAGTTACAAGCATTGTGGCTAAGAAG
GACGTAGCTTTAGCTACACGGATCGAAGAGGCCATGAAGAAAAATGAGAGCTTGGAAGCT
CTGACGACTAACAATGTTAGAAGGGCAGCCAGCCCGCAGAGTGTGAGCACCAAAGGAAGG
CCCTCAAGGTTGGTTAAGACTTCAAATGCTCTTAAAGTTGTCAATCAGAAGGGTAGAAGG
GGGGTTGCGCTATCTAGCAAGTCATCCCGGACTCCCAAGGATACAACTTCAACCCGAAGG
CGCTCACCGCTGAAGAGCCAGGCCAAGACAACAAAATCGGCAGCCCCGCGGAAAGCCAAG
CCGTTGAAACCTTCTCAGAGCAGCACAAAGGCCTCGAAGAGCAAAGCAAAACCTGAGGGT
CGAAGATCAAAGAGTGATGCTCTGAACAAGCTCGGAACTAAGCTCAGTGTGGTCGGATTC
AGAGGACGCAGCTCAGGCAAATCAGCACAATCTTCATAA

Peptide Sequence

PEP ID

EES00166
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:3689218:3694202:1 gene:SORBI_3003G039300 transcript:EES00166 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMAGAAAAGRCLLLSRPSPFRLRLLRAALSTAAPTIGPTSTPAPPPRHELLLERLRLRH
LKDASSSPGAPAPASRGAERSSQQGKGKRVEAAESFEELGLGEEVMAALGEMGISKPTEI
QCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGISMKPRRPRAVVLCPT
RELTEQVYRVAKSISHHARFRSTMVSGGTRLRPQEDSLNMPVDMVVGTPGRILDHIKDGN
MVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQK
LIDEEFEGIVHLRTSSFQKRVSTARHDFIKLSGAENKLEALLQVLEPSLAKGNKVMVFCN
TLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDL
DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSIVAKKDVALATRIEEAMKKNESLEA
LTTNNVRRAASPQSVSTKGRPSRLVKTSNALKVVNQKGRRGVALSSKSSRTPKDTTSTRR
RSPLKSQAKTTKSAAPRKAKPLKPSQSSTKASKSKAKPEGRRSKSDALNKLGTKLSVVGF
RGRSSGKSAQSS

Transcript Sequence

Transcript ID

EES00166
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:3689218:3694202:1 gene:SORBI_3003G039300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGTCGTGTGCTCTCTTATCCGCGCCGCATTCTCCCTTCCACTCAGAAACCCCCGCACCCT
CTAAACCCTCACCACCGGCCACCATGGCGATGGCCGGCGCCGCCGCCGCCGGTCGCTGCC
TCCTGCTCTCCCGCCCGTCCCCTTTCCGGCTCCGCCTCCTCCGCGCCGCCCTCTCCACCG
CTGCCCCCACCATCGGCCCCACCTCCACTCCCGCTCCCCCTCCGCGGCACGAGCTCCTCC
TCGAGCGCCTCCGCCTCCGCCACCTCAAGGACGCCTCCTCCTCCCCCGGCGCCCCGGCGC
CCGCCTCGCGGGGCGCGGAGCGGAGCTCGCAGCAGGGAAAGGGGAAGAGGGTCGAGGCCG
CGGAGAGCTTCGAGGAGCTCGGCCTTGGGGAGGAGGTGATGGCCGCTCTCGGGGAGATGG
GCATCTCCAAGCCCACGGAGATCCAGTGCGTTGGTGTGCCGGCGGTGCTGGCCGGCACCA
GCGTCGTGCTCGGCTCCCACACTGGCTCTGGGAAGACGCTGGCCTACTTGCTCCCTCTTG
TTCAGCTACTTCGGCGTGATGAAGCAATGCTGGGGATATCAATGAAGCCAAGGCGGCCAA
GAGCAGTAGTACTCTGCCCCACTAGGGAGCTCACTGAGCAGGTTTATCGAGTTGCAAAGT
CTATCAGCCATCATGCACGTTTTCGGTCAACGATGGTTAGTGGAGGCACCCGTCTAAGGC
CCCAGGAAGATTCTTTGAACATGCCCGTTGATATGGTTGTTGGTACTCCTGGAAGGATTC
TTGATCATATCAAGGATGGTAACATGGTTTATGGCGATATTAAGTATCTGGTTCTGGATG
AGGCAGATACAATGTTTGATCAAGGCTTTGGACCAGACATACGGAAGTTCCTTGCTCCAT
TGAAGAATCGTGCTGCAAAGCCTGGTGATCAAGGTTTCCAAACAGTATTAGTCACTGCCA
CTATGACAAAGGCTGTGCAAAAGTTGATTGATGAGGAATTTGAAGGTATTGTCCATTTGC
GGACATCATCATTTCAAAAGAGAGTTTCAACAGCACGGCATGACTTTATCAAACTTTCTG
GAGCAGAAAACAAACTTGAGGCTCTTCTGCAGGTTCTTGAGCCAAGCTTGGCAAAGGGAA
ACAAAGTTATGGTGTTCTGCAATACTTTGAATTCAAGTCGTGCAGTGGACCATTTTCTAA
CTGAAAATCAGATATCCACTGTTAACTATCATGGAGAGGTTCCAGCTGAAGAGAGAGTTG
AGAACCTGAACAAATTCCGTAATGAAGAGGGGGACTGCCCAACATTAGTATGCACTGATC
TGGCAGCTAGAGGCCTGGACCTGGATGTTGACCATGTCATCATGTTTGACTTCCCATCAA
ATTCGATTGACTACCTTCACAGAACTGGAAGAACTGCACGCATGGGAGCCAAAGGGAAAG
TTACAAGCATTGTGGCTAAGAAGGACGTAGCTTTAGCTACACGGATCGAAGAGGCCATGA
AGAAAAATGAGAGCTTGGAAGCTCTGACGACTAACAATGTTAGAAGGGCAGCCAGCCCGC
AGAGTGTGAGCACCAAAGGAAGGCCCTCAAGGTTGGTTAAGACTTCAAATGCTCTTAAAG
TTGTCAATCAGAAGGGTAGAAGGGGGGTTGCGCTATCTAGCAAGTCATCCCGGACTCCCA
AGGATACAACTTCAACCCGAAGGCGCTCACCGCTGAAGAGCCAGGCCAAGACAACAAAAT
CGGCAGCCCCGCGGAAAGCCAAGCCGTTGAAACCTTCTCAGAGCAGCACAAAGGCCTCGA
AGAGCAAAGCAAAACCTGAGGGTCGAAGATCAAAGAGTGATGCTCTGAACAAGCTCGGAA
CTAAGCTCAGTGTGGTCGGATTCAGAGGACGCAGCTCAGGCAAATCAGCACAATCTTCAT
AAATCATAAGATAAAAAGGTTCTTGGAGGATTTGGATAGTGCAGCCTGTAAATAGCTGAG
ACTTCGTTTCTTCATATTTTTTTTCCTTGCGGGCTTATAAGTGAAGACCACAATCTTAGA
TATGAACACAGCATAGCTATGTAATATTGTACTGTATTCAGCAGAATGTTGGAATAATAC
CTTTCATTACCTGTATTCACGTATTATCGGGTGCACGTATGCCCATTGTTTTTAGAAGTG
TCTAGGTGATAATTCAGTTGTTTCGGCCTCTCCTATCAACTGAGGCCTTGTTTAGTTCGC
AAATTTTTT