Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00159
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:3570808:3573716:1 gene:SORBI_3003G038000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGCCACCATATCTTCCTGCCTGAGCCTCCTGCCCACCGTGCACCACCGGGGCTTC
CCCAATGCGGCACTGACGAACACGGTTCAGCGCCGTCGTCGTTCTTGCCGCTATGTCGTC
GTCGCCTCGGCGTCCACAACCAACCGGGCGGCCCCTGTGATCGGGGAGACGGGCAGCGGC
TCTGATCAGGCAGCGAAGCCGTCGGGGCATTCTGACGATCACGGGGAACTGGCCGCACGG
TGGCGGGAGATCCATGGCAGCAACAACTGGGAGGGTCTGCTGGACCCCATCGACGACGTG
CTCCGCGGCGAGCTCATCCGCTACGGCGAGTTCGCGCAGGCCACCTACGACAGCTTCGAC
TACGACCGCTTCTCCCCCTACTGCGGCAGCTGCAAGTACCCTGCCAGGACCTTCTTCCAC
GACGTCGGCCTCGGCGGCGTCGGCTACGAGGTGAGCCGCTACCTCTACGCCACCTGCAAC
GGCCTCAAGCTCCCCAACTTCGCCAACCGGAAGCACACGGCCGCCGACGCCAAGCTGTGG
AGCGAGTCCGGCACGTTCATCGGGTACGTGGCCGTGTCGACCGACGAGGAGACGGCGCGG
CTCGGCCGCCGGGACATCGCCGTGGCGTGGCGCGGCACGATCACCCGCCTCGAGTGGGTG
GCCGACCTGACGTCCGACCAGATCCCTCTGCGCGAGACGGGCGTCCCGTGCCCGGACCCG
GACGTGAAGGTGGAGAGAGGGTTCGCGGCGCTGTACACGGACAAGGACGCCGGCTGCCGG
TTCTGCAGGTACTCGGCGCGGGAGCAGGCGCTGGCCGAGGTGCGCAAGCTGGTGGAGCTC
TACCACGGGCGGGGCGAGCAGGTGAGCGTGACGGTCACGGGCCACAGCCTGGGCAGCGGG
CTGGCGATGCTGTGCGCGTTCGACGTCGCGGAGACGCGCGCGAACGCGTCGCCGGACGAC
GGCAGGGTCAGGGTGGCGCCGGTGTGCGTGTTCTCCTTCGCCGGCCCGCGCGTGGGCAAC
GTCGGCTTCAGGCGGCGGTTCGAGCGGGAGCTCGGCGTGCGTGCGCTGCGCGTGGTGAAC
GTGCACGACAGGGTGCCCAAGGTGCCCGGCGTGTTCTTCAACGAGGCGGCGTTCCCGGAG
CTGGTGCTGCGGGCGGTGGGCAGGCTGGGCGTCGGCGGCGTGTACACGCACCTGGGCGTG
GCGCTGGAGCTGGACCACAGGGCGTCGCCGTTCCTCAAGGAGACCCTGGACATCTCGTGC
TACCACAACCTGGAGGCGCACCTGCACCTGCTGGACGGCTTCCGCGGCTCCGGCGAGGGG
TTCGAGCTCCGAGGCAGGGACCCCGCGCTGGTGAACAAGTCGAGCGACTTCCTCCGGGAG
GACCACATGGTGCCGCCCGTGTGGTACCAGGCGGAGAACAAGGGCATGGTGAGGACGGAG
GACGGGCGGTGGGTGCTGCCGCCGCGGCAGCGGGAGCTCGACCAACACCCGGAGGACACT
GACCATCACCTCCAGCGGCTCGGCCTCACCCTCACCGCGTGA

Peptide Sequence

PEP ID

EES00159
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:3570808:3573716:1 gene:SORBI_3003G038000 transcript:EES00159 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAATISSCLSLLPTVHHRGFPNAALTNTVQRRRRSCRYVVVASASTTNRAAPVIGETGSG
SDQAAKPSGHSDDHGELAARWREIHGSNNWEGLLDPIDDVLRGELIRYGEFAQATYDSFD
YDRFSPYCGSCKYPARTFFHDVGLGGVGYEVSRYLYATCNGLKLPNFANRKHTAADAKLW
SESGTFIGYVAVSTDEETARLGRRDIAVAWRGTITRLEWVADLTSDQIPLRETGVPCPDP
DVKVERGFAALYTDKDAGCRFCRYSAREQALAEVRKLVELYHGRGEQVSVTVTGHSLGSG
LAMLCAFDVAETRANASPDDGRVRVAPVCVFSFAGPRVGNVGFRRRFERELGVRALRVVN
VHDRVPKVPGVFFNEAAFPELVLRAVGRLGVGGVYTHLGVALELDHRASPFLKETLDISC
YHNLEAHLHLLDGFRGSGEGFELRGRDPALVNKSSDFLREDHMVPPVWYQAENKGMVRTE
DGRWVLPPRQRELDQHPEDTDHHLQRLGLTLTA

Transcript Sequence

Transcript ID

EES00159
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:3570808:3573716:1 gene:SORBI_3003G038000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGATGTATCGATGGCGAGCTGCTCCTCCTCCGAGCTACGAGCTCAAACACGCCAAGAAA
GCAAGAAAACTGTAGCCACCGCGCGCACGACGGCACGACTAGCTAGGCCACGTTGACGTT
CAAAACAAGCATAGCGTCGTCGTCTGATCTCTGATCGCGTCGACGACAACGTTGAGTCGG
TGACCACACCAAGCAGGCGGTGATGGCAGCCACCATATCTTCCTGCCTGAGCCTCCTGCC
CACCGTGCACCACCGGGGCTTCCCCAATGCGGCACTGACGAACACGGTTCAGCGCCGTCG
TCGTTCTTGCCGCTATGTCGTCGTCGCCTCGGCGTCCACAACCAACCGGGCGGCCCCTGT
GATCGGGGAGACGGGCAGCGGCTCTGATCAGGCAGCGAAGCCGTCGGGGCATTCTGACGA
TCACGGGGAACTGGCCGCACGGTGGCGGGAGATCCATGGCAGCAACAACTGGGAGGGTCT
GCTGGACCCCATCGACGACGTGCTCCGCGGCGAGCTCATCCGCTACGGCGAGTTCGCGCA
GGCCACCTACGACAGCTTCGACTACGACCGCTTCTCCCCCTACTGCGGCAGCTGCAAGTA
CCCTGCCAGGACCTTCTTCCACGACGTCGGCCTCGGCGGCGTCGGCTACGAGGTGAGCCG
CTACCTCTACGCCACCTGCAACGGCCTCAAGCTCCCCAACTTCGCCAACCGGAAGCACAC
GGCCGCCGACGCCAAGCTGTGGAGCGAGTCCGGCACGTTCATCGGGTACGTGGCCGTGTC
GACCGACGAGGAGACGGCGCGGCTCGGCCGCCGGGACATCGCCGTGGCGTGGCGCGGCAC
GATCACCCGCCTCGAGTGGGTGGCCGACCTGACGTCCGACCAGATCCCTCTGCGCGAGAC
GGGCGTCCCGTGCCCGGACCCGGACGTGAAGGTGGAGAGAGGGTTCGCGGCGCTGTACAC
GGACAAGGACGCCGGCTGCCGGTTCTGCAGGTACTCGGCGCGGGAGCAGGCGCTGGCCGA
GGTGCGCAAGCTGGTGGAGCTCTACCACGGGCGGGGCGAGCAGGTGAGCGTGACGGTCAC
GGGCCACAGCCTGGGCAGCGGGCTGGCGATGCTGTGCGCGTTCGACGTCGCGGAGACGCG
CGCGAACGCGTCGCCGGACGACGGCAGGGTCAGGGTGGCGCCGGTGTGCGTGTTCTCCTT
CGCCGGCCCGCGCGTGGGCAACGTCGGCTTCAGGCGGCGGTTCGAGCGGGAGCTCGGCGT
GCGTGCGCTGCGCGTGGTGAACGTGCACGACAGGGTGCCCAAGGTGCCCGGCGTGTTCTT
CAACGAGGCGGCGTTCCCGGAGCTGGTGCTGCGGGCGGTGGGCAGGCTGGGCGTCGGCGG
CGTGTACACGCACCTGGGCGTGGCGCTGGAGCTGGACCACAGGGCGTCGCCGTTCCTCAA
GGAGACCCTGGACATCTCGTGCTACCACAACCTGGAGGCGCACCTGCACCTGCTGGACGG
CTTCCGCGGCTCCGGCGAGGGGTTCGAGCTCCGAGGCAGGGACCCCGCGCTGGTGAACAA
GTCGAGCGACTTCCTCCGGGAGGACCACATGGTGCCGCCCGTGTGGTACCAGGCGGAGAA
CAAGGGCATGGTGAGGACGGAGGACGGGCGGTGGGTGCTGCCGCCGCGGCAGCGGGAGCT
CGACCAACACCCGGAGGACACTGACCATCACCTCCAGCGGCTCGGCCTCACCCTCACCGC
GTGAAGGTGAAGCTAAACGATGCGAGGCCTGCACGCTACGGAGTACCACTACTACTGTAG
TGCGTGTACAAACATAGCGTTGGCAGCTCGGTGGCGATGGCGCGCTCCAGAGCGCGTCGA
TGGCGTGCATGATGCGGGTGACGTGCGTCGGCAGTCGGTTACTCTGTTGCCGTGCGCGTT
CGTGCAGTGGCAGCAGAAAGGTCGTGTGGTTCGATTGTAATTCCCTCTACTTGTGTTTGC
AAATTGTCAGAAAAGCTGCTGCTTGCAGCGCCAAAAATCTCTGCGATTTCCACCCGTTCT
TCCGTTCTGTTTGCCGTCCGACTAGAGTTAGGGCGACAATTGGCATCAAAGCCGAGGCTT
GGGAGAAGGCAGCGTTCTGTTTGCACGGCAGCTAGTGTTAAATTGTTACTTTTGCAACAT
GAGATGCTTTGTTATCTTGCCTGTTTATGTGATAAACACTACGCTAATGTTTGTGCAAAT
ACAGATTCCCAATGAGGAAAAGACACATCGTAGATCATTGGTCCTCCGTTCTGCAAATGG
CTAGAGCAGGGCAAGGATAGAAGATAGAGGCATTCATTTTCTAATTTCCTTTCTTAGCGA
GCTATCTCTGTTGGTCCGGGTTGAAACCCCGACAGCAACATGGTTGACTTGAACCAACAG
ATAGTGGGCAGGGGTTCTCAGGCTCGTTCCCTGAAGGCTCGTATCAGATAAAGTGGCAGG
CCTGCTGTGTCGACGAGAATGTGTCCTATTTTAGCCTCCTGCCCCTGAACGATGGCTCCA
TGTTTTCGGTCCAGAAGTCCTGACTGAATGGCTGCTGCAGTGACCCGAATGGAAGATGGA
ACATACTCTTCTTGCTCGCAGTGTCTGTTCTTGAGTTCATTTGTATGCCCGCAAAAGGCT
TGTGTGTCTATGATCCGCCTATCTGGTCTGGGTTTGACATGCTCACTCTATTGCCTGTGT
TTTTTTTGAAAGAACTGGAGAGACCAAAGGCCTCTACAGGAATTTATTAGAAACCAAAGT
AAGATCTCTATGGTATTGGGATTAGCATAACAATTTGTATTTTTTCTGAAAGGGGTTGAG
TGATGCTTTCCCCCATTAACTCCTTGATCTTTGTGATAGCATCCTCTGATCACTATTTTT
ATTGTCATCAGGATGCAACACAACAGCTG