Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00096
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:2140516:2143119:1 gene:SORBI_3003G025300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTCCCTCACACCTCCTCTCGCTGCTTCTGGCCGTCACCGTCGCTGCCACCGTCGAC
GTCGTCCATGCGCAGGGCATCCCCTTCCCGACGCCAGCATCCACGAACCTCTCCACCAGC
TGGACCATCAGCCTCAAGGCGGACGGCCACGGCGCCCAGTCCTTCGACTACATGGACAGC
ACGTCCGTGAGCGTCTTCCTCCTCCAGTCCATCCAGTCGCCGCCGCAGGAAGGTCTCTGC
TTCGCCGCGTGCTTCTACTGCGTCGCCCCGTGCGAGGCCTTCCTCTTCGGCGTCTGCATC
GTCTACGTCGACGGCGGCGGCTTCCTCAGCTGGCCGAACGCGGGCAGCCCGCAGGTGGTC
TGGTCCGCAAACCGGGACCGCCTCGTTCGTGAGAACGCCACCCTCAGCTTCACGGCCGGC
GGCGACCTACAGCTCCGGAACACCGCCGGAGGCCTCGTCTGGTCCACCGGCACCTCGGGC
CAGTCTGTTGCCGGGATGACCGTGACCAAGTCCGGCAACCTGGTGCTGTTCGATCGCAAG
AATGCAGCGGTGTGGCAGTCATTCGACCATCCGACGGATTGTCTGCTCCCAGGGCAGCCA
CTAGTGGAAGGGATGAGGTTGACGCCAAATGCATCCAGCACAAACTGGACGACAAGCAAT
CAGCTTTATCTCACTGTCCTTTCAGATGGTCTGTATGCATTTGCAGAATCTTCGCCGCCT
CAATTGTACTACCAAAAGACGGTGACCACCAAAGCTGGAAGCAGGAAAACTTACATGACC
CTGACAAATGGCTCGGTGGCTATCTTTGCATCCTCCTCATCTGTCAATGTATCAACTCTA
CAGCCAAACAGCATGATCAACATGACGGCGGGAGAGATGGAGTATGTGAGGCTCGAATCT
GACGGACACTTGAAGTTGTACCGGTATAAAGGAATTGAAGGATGGCCGATGGTGCAGGAC
ATTCTGCAGGGGCAGGTAGGCAGTTGTGCTTACCCAACTGTTTGTGGTGCTTATGGCATT
TGCGTCAGTGGCCAGTGTACATGCCCAACTGACGGCACCGCTACATACTTCAAGCAAATA
GATGACCGCAGGATCAACCTTGGATGTGTGCCCGTGACTCCAATTTCTTGTGCCTCGATG
CAATACCACCAGCTCCTTGCTCTGAGTAATGTTTCTTACTTCAATTATATAGATACAAAG
GCCGCGTTGCCTCAGATGATTGACGAAGAAAGCTGCAAGAAGGCCTGCTTGCAGAATTGC
TCCTGCAAGGCTGCATTCTTTCAGTATGGTGGTAACGACACCTCTCAAGGCTCCTGTTAC
CTGCCAACACAAGTCTTTTCGTTGCAAGTAAATCAGTGGCAAGAAACTCACTATAGTTCT
TCTGCATACCTTAAGGTGCAGATCACAAGGTCTCCTCCTCCTATTCCTGGTCCCTCGAAT
CCCAATGGAACAGTGAGTAGGTCCACACCCACAAGAAAGGGAAGGATTGGTGCAGGTGTG
ATTGTTGGATCGACACTTGCAGGGGTCATTTTTGTACTAGCTGTGATCATCATTAGCTTG
ATGGTAATCCGGAGGCGATATCAGAGTAGAGATGATGAGGATGATTTTGGAGAAGTGCCA
GGTATGACTACTAGATTCACATTTGAGCAGTTGAAAGTAGCAACTGAGCAATTCAGCAAA
ATGATTGGGAAAGGAGGATTTGGATCTGTTTTTGAGGGACAGGTAGGTGAGCAGAGAGTT
GCCGTAAAACAGCTGGATCGAGCTGATCAAGGAAAGAGGGATTTCTTGGCAGAAGTTGAG
ACAATTGGAAACATTCATCATATAAATCTGGTGACATTGATTGGCTTTTGTGCAGAGAAA
TCTCATAGACTCCTAGTATATGAATATATGTCCCAAGGATCATTGGACAGATGGATCTAT
TCCCAAGATGCAAGTATGTCTCTAGATTGGCATGCACGATGCAGAATTATCACCGATATC
GCCAAGGGCCTAGCTTATCTTCATGAAGAGTGCAGACAGCGAATTGCTCATTTGGATATC
AAACCACAAAATATCCTCTTAGATGACAACTTAAGCGCAAAGCTTTCTGATTTCGGGCTA
TCTAAGATGATTGACAGGGATAAGAGCCAAGTGATTACAAGAATGAGAGGCACTCCTGGA
TATTTAGCTCCTGAGTGGTTGACATCACAAATCACTGAGAAAGTTGACATATACAGCTTT
GGGGTAGTAGTCATGGAAATTATCAGCGGGAGAAAGAATCTTGATTATTCTCGACCTCAA
GAAAGTGTTCATCTCATTAGCATATTGCAGGAAAAGGCAAGAAATGATCAGTTGGAAGAT
CTGATTGATATTCATAGTGAGGAAATGCAAATTCACAAGGAAGAAGTGATTCAGATGATG
AGGCTCGCGATGTGGTGTTTGCAGATTGACTACAACAAGAGGCCTCAAATGTCAGTTGCT
GTGAAAGTGCTAGAAGGTACAGTGAATGTAGAAACTAATATAGAATTCAACTTCGTAGCT
ATGGTTCCAAATAACCTTACCAATGATGGGAAATTGGCTTCATCAGCTCCACTTCTAGCC
TCCCATTTATCAGGTCCTAGGTGA

Peptide Sequence

PEP ID

EES00096
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:2140516:2143119:1 gene:SORBI_3003G025300 transcript:EES00096 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPSHLLSLLLAVTVAATVDVVHAQGIPFPTPASTNLSTSWTISLKADGHGAQSFDYMDS
TSVSVFLLQSIQSPPQEGLCFAACFYCVAPCEAFLFGVCIVYVDGGGFLSWPNAGSPQVV
WSANRDRLVRENATLSFTAGGDLQLRNTAGGLVWSTGTSGQSVAGMTVTKSGNLVLFDRK
NAAVWQSFDHPTDCLLPGQPLVEGMRLTPNASSTNWTTSNQLYLTVLSDGLYAFAESSPP
QLYYQKTVTTKAGSRKTYMTLTNGSVAIFASSSSVNVSTLQPNSMINMTAGEMEYVRLES
DGHLKLYRYKGIEGWPMVQDILQGQVGSCAYPTVCGAYGICVSGQCTCPTDGTATYFKQI
DDRRINLGCVPVTPISCASMQYHQLLALSNVSYFNYIDTKAALPQMIDEESCKKACLQNC
SCKAAFFQYGGNDTSQGSCYLPTQVFSLQVNQWQETHYSSSAYLKVQITRSPPPIPGPSN
PNGTVSRSTPTRKGRIGAGVIVGSTLAGVIFVLAVIIISLMVIRRRYQSRDDEDDFGEVP
GMTTRFTFEQLKVATEQFSKMIGKGGFGSVFEGQVGEQRVAVKQLDRADQGKRDFLAEVE
TIGNIHHINLVTLIGFCAEKSHRLLVYEYMSQGSLDRWIYSQDASMSLDWHARCRIITDI
AKGLAYLHEECRQRIAHLDIKPQNILLDDNLSAKLSDFGLSKMIDRDKSQVITRMRGTPG
YLAPEWLTSQITEKVDIYSFGVVVMEIISGRKNLDYSRPQESVHLISILQEKARNDQLED
LIDIHSEEMQIHKEEVIQMMRLAMWCLQIDYNKRPQMSVAVKVLEGTVNVETNIEFNFVA
MVPNNLTNDGKLASSAPLLASHLSGPR

Transcript Sequence

Transcript ID

EES00096
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:2140516:2143119:1 gene:SORBI_3003G025300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTCCCTCACACCTCCTCTCGCTGCTTCTGGCCGTCACCGTCGCTGCCACCGTCGAC
GTCGTCCATGCGCAGGGCATCCCCTTCCCGACGCCAGCATCCACGAACCTCTCCACCAGC
TGGACCATCAGCCTCAAGGCGGACGGCCACGGCGCCCAGTCCTTCGACTACATGGACAGC
ACGTCCGTGAGCGTCTTCCTCCTCCAGTCCATCCAGTCGCCGCCGCAGGAAGGTCTCTGC
TTCGCCGCGTGCTTCTACTGCGTCGCCCCGTGCGAGGCCTTCCTCTTCGGCGTCTGCATC
GTCTACGTCGACGGCGGCGGCTTCCTCAGCTGGCCGAACGCGGGCAGCCCGCAGGTGGTC
TGGTCCGCAAACCGGGACCGCCTCGTTCGTGAGAACGCCACCCTCAGCTTCACGGCCGGC
GGCGACCTACAGCTCCGGAACACCGCCGGAGGCCTCGTCTGGTCCACCGGCACCTCGGGC
CAGTCTGTTGCCGGGATGACCGTGACCAAGTCCGGCAACCTGGTGCTGTTCGATCGCAAG
AATGCAGCGGTGTGGCAGTCATTCGACCATCCGACGGATTGTCTGCTCCCAGGGCAGCCA
CTAGTGGAAGGGATGAGGTTGACGCCAAATGCATCCAGCACAAACTGGACGACAAGCAAT
CAGCTTTATCTCACTGTCCTTTCAGATGGTCTGTATGCATTTGCAGAATCTTCGCCGCCT
CAATTGTACTACCAAAAGACGGTGACCACCAAAGCTGGAAGCAGGAAAACTTACATGACC
CTGACAAATGGCTCGGTGGCTATCTTTGCATCCTCCTCATCTGTCAATGTATCAACTCTA
CAGCCAAACAGCATGATCAACATGACGGCGGGAGAGATGGAGTATGTGAGGCTCGAATCT
GACGGACACTTGAAGTTGTACCGGTATAAAGGAATTGAAGGATGGCCGATGGTGCAGGAC
ATTCTGCAGGGGCAGGTAGGCAGTTGTGCTTACCCAACTGTTTGTGGTGCTTATGGCATT
TGCGTCAGTGGCCAGTGTACATGCCCAACTGACGGCACCGCTACATACTTCAAGCAAATA
GATGACCGCAGGATCAACCTTGGATGTGTGCCCGTGACTCCAATTTCTTGTGCCTCGATG
CAATACCACCAGCTCCTTGCTCTGAGTAATGTTTCTTACTTCAATTATATAGATACAAAG
GCCGCGTTGCCTCAGATGATTGACGAAGAAAGCTGCAAGAAGGCCTGCTTGCAGAATTGC
TCCTGCAAGGCTGCATTCTTTCAGTATGGTGGTAACGACACCTCTCAAGGCTCCTGTTAC
CTGCCAACACAAGTCTTTTCGTTGCAAGTAAATCAGTGGCAAGAAACTCACTATAGTTCT
TCTGCATACCTTAAGGTGCAGATCACAAGGTCTCCTCCTCCTATTCCTGGTCCCTCGAAT
CCCAATGGAACAGTGAGTAGGTCCACACCCACAAGAAAGGGAAGGATTGGTGCAGGTGTG
ATTGTTGGATCGACACTTGCAGGGGTCATTTTTGTACTAGCTGTGATCATCATTAGCTTG
ATGGTAATCCGGAGGCGATATCAGAGTAGAGATGATGAGGATGATTTTGGAGAAGTGCCA
GGTATGACTACTAGATTCACATTTGAGCAGTTGAAAGTAGCAACTGAGCAATTCAGCAAA
ATGATTGGGAAAGGAGGATTTGGATCTGTTTTTGAGGGACAGGTAGGTGAGCAGAGAGTT
GCCGTAAAACAGCTGGATCGAGCTGATCAAGGAAAGAGGGATTTCTTGGCAGAAGTTGAG
ACAATTGGAAACATTCATCATATAAATCTGGTGACATTGATTGGCTTTTGTGCAGAGAAA
TCTCATAGACTCCTAGTATATGAATATATGTCCCAAGGATCATTGGACAGATGGATCTAT
TCCCAAGATGCAAGTATGTCTCTAGATTGGCATGCACGATGCAGAATTATCACCGATATC
GCCAAGGGCCTAGCTTATCTTCATGAAGAGTGCAGACAGCGAATTGCTCATTTGGATATC
AAACCACAAAATATCCTCTTAGATGACAACTTAAGCGCAAAGCTTTCTGATTTCGGGCTA
TCTAAGATGATTGACAGGGATAAGAGCCAAGTGATTACAAGAATGAGAGGCACTCCTGGA
TATTTAGCTCCTGAGTGGTTGACATCACAAATCACTGAGAAAGTTGACATATACAGCTTT
GGGGTAGTAGTCATGGAAATTATCAGCGGGAGAAAGAATCTTGATTATTCTCGACCTCAA
GAAAGTGTTCATCTCATTAGCATATTGCAGGAAAAGGCAAGAAATGATCAGTTGGAAGAT
CTGATTGATATTCATAGTGAGGAAATGCAAATTCACAAGGAAGAAGTGATTCAGATGATG
AGGCTCGCGATGTGGTGTTTGCAGATTGACTACAACAAGAGGCCTCAAATGTCAGTTGCT
GTGAAAGTGCTAGAAGGTACAGTGAATGTAGAAACTAATATAGAATTCAACTTCGTAGCT
ATGGTTCCAAATAACCTTACCAATGATGGGAAATTGGCTTCATCAGCTCCACTTCTAGCC
TCCCATTTATCAGGTCCTAGGTGA