Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00090
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:2071176:2075256:1 gene:SORBI_3003G024200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGGCCGTGGCGTCGCTGTACAGGCGGGTCCTCCCGTCGCCGCCGGCGGTGGAC
TTCGCTTCGCCGGAGGGCAAGCGCCTCTTCGCCGAGGCCCTGGCGGCGGGCACCATGGAG
GGCTTCTTCCCCCTGGTCTCCGTCTTCCAGACGCAGTCGGAGCCGGCCTTCTGCGGCCTC
GCCTCCCTCGCCGTCGTCCTCAACGCGCTCGCCATCGACCCGGGCCGCCGCTGGAAGGGG
CCCTGGCGCTGGTTCGACGAGTCCATGCTCGACTGCTGCGAGCCCCTCGACAAGGTCAAG
GACCAGGGCATCACCTTCGGCAAGGTCGCCTGCCTCGCGCACTGCTCCGGCGCCGACGTC
CAATCCTTCCGCGCCAACCGGGTCACCATCGACGACCTACGGCGGCATCTCATCCGATGC
GTCTCCTCCCAGGACTGCCATCTTATTGCTTCCTACCACAGGAAGGCTTTCAAACAGACT
GGAACTGGGCATTTCTCCCCAATCGGTGGCTACCATGCCGGACAGGATATGGCGCTCATC
TTGGATGTCGCCCGTTTCAAATATCCTCCACATTGGGTTCCATTGCAACTTCTTTGGGAA
GCCATGAATACCACTGATGACTCAACTGGACTTATCAGAGGGTTCATGCTTATATCAAGA
CAGACTGCAGCTCCTTCATCGCTGTACACAGTGAGTTGCAGAGATGAAAACTGGAAAAGC
ATGGCGAAGTATTGTGTTGAAGATTTACCAAATCTTTTGAAGGCAGAGAATCTAGACAAC
GTTGCAGCACTTTTGTCCCGTTTAATTGAGTCTCTTCCAGCTGATGCTGAATCTTTGATC
AAATGGGTTGTAGAAGTTAGGAGAAAAGAGGAAGGTGGACCAAGCTTAAGCAAAGAGGAG
AAAGAAAGGCTTTTCTTGAAGGAAAATGTACTGCAGCAAGTTCGTGATACCAGGCTATTT
GCCATAGTCCATGATCAACAGAATGCTAATAAACCATGTTGTAATTGCTCATCACTGAGC
GAAGAAGATTCCCTTACTAGGATTGCAGCCGTTGTGTGCTGTCAGGGAGCTGCAATGCTA
TCAGGAAACCTTGTGCCAAGAGATGCCTTCTGCTGCAAAGAAACATGTTTGAAATGTGTC
CAAGCGAATGGTGATGGGCTCAAGACCGTTATCTCAGGCTCTGTGGTATCTGAAGGCAGT
GAGCAAGGTGTTGATATGCTTTTACCAATGTCTTCACCTAGTGCCAGTTCATGCAATTCA
AACTTGAGGAACAATGTCATCAAATATCCATCAACCGTGGATGTTCTAACTGTTCTTCTG
CTGGCTTTACATCCCAACACGTGGTTGGGCATCAAAGATGAGAAGCTGAAAGCTGAATTT
CAGACTCTTATTTCAACTGACAGTCTACCTGATGATCTGAAACGAGAGATATTGCATCTA
AGGCGGCAACTCTATTATCTAAAGGCCTGTAAAGAAGAGGAATGTGAAGACGCGGAGCCA
CCATCGCCTAAGCAGCAAAGCTGA

Peptide Sequence

PEP ID

EES00090
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:2071176:2075256:1 gene:SORBI_3003G024200 transcript:EES00090 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAVASLYRRVLPSPPAVDFASPEGKRLFAEALAAGTMEGFFPLVSVFQTQSEPAFCGL
ASLAVVLNALAIDPGRRWKGPWRWFDESMLDCCEPLDKVKDQGITFGKVACLAHCSGADV
QSFRANRVTIDDLRRHLIRCVSSQDCHLIASYHRKAFKQTGTGHFSPIGGYHAGQDMALI
LDVARFKYPPHWVPLQLLWEAMNTTDDSTGLIRGFMLISRQTAAPSSLYTVSCRDENWKS
MAKYCVEDLPNLLKAENLDNVAALLSRLIESLPADAESLIKWVVEVRRKEEGGPSLSKEE
KERLFLKENVLQQVRDTRLFAIVHDQQNANKPCCNCSSLSEEDSLTRIAAVVCCQGAAML
SGNLVPRDAFCCKETCLKCVQANGDGLKTVISGSVVSEGSEQGVDMLLPMSSPSASSCNS
NLRNNVIKYPSTVDVLTVLLLALHPNTWLGIKDEKLKAEFQTLISTDSLPDDLKREILHL
RRQLYYLKACKEEECEDAEPPSPKQQS

Transcript Sequence

Transcript ID

EES00090
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:2071176:2075256:1 gene:SORBI_3003G024200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACAATGGTAAAATTACATGTTATCTAAACAACAATAAAAGTCAGGGATCTGAAATATA
GGAGAAGTGGTAAAAAAAAGACTGATTCAATGCTGTCAAAATTCAGATCCACTCCAAGAT
CATGGTCAATAGTAATACAGAATTACAAATCTTCGTTTAAGTTTTGATAAAACTCATGTA
GACCTTTTTTTTAAAAAAATAATGCAAAACAGATGGATTATCTATTTATCTGTAAGTTCA
GCAGCGCTTTTTTTTTAAAAAAAAAGAAAAATGTGTGGGGTTCGCATTGTTTGACTCCGG
GCTCAGCAGCAGTGGACTTTGGGCTTCGTCCATCGTGGCCGTAGTCGTCTTTTTTGGAGA
AACGTGTTCGTGGCCGTCGTCGTCTGCAGAGATTCGAAACGAAAGTGAGAGAGCATCGCA
GAGGGAAGAAGGCGGCCCCCTTGGCTGGCTCGATCGCCGCTGTGTTCACGCGGAGGAATC
AGATCAGCACCGCGAAATCCACCAGCGCAGACGAGGCAGCGAGCAGTCCAGGCCTCTAGG
GGACCAGGATGGCGGCGGCCGTGGCGTCGCTGTACAGGCGGGTCCTCCCGTCGCCGCCGG
CGGTGGACTTCGCTTCGCCGGAGGGCAAGCGCCTCTTCGCCGAGGCCCTGGCGGCGGGCA
CCATGGAGGGCTTCTTCCCCCTGGTCTCCGTCTTCCAGACGCAGTCGGAGCCGGCCTTCT
GCGGCCTCGCCTCCCTCGCCGTCGTCCTCAACGCGCTCGCCATCGACCCGGGCCGCCGCT
GGAAGGGGCCCTGGCGCTGGTTCGACGAGTCCATGCTCGACTGCTGCGAGCCCCTCGACA
AGGTCAAGGACCAGGGCATCACCTTCGGCAAGGTCGCCTGCCTCGCGCACTGCTCCGGCG
CCGACGTCCAATCCTTCCGCGCCAACCGGGTCACCATCGACGACCTACGGCGGCATCTCA
TCCGATGCGTCTCCTCCCAGGACTGCCATCTTATTGCTTCCTACCACAGGAAGGCTTTCA
AACAGACTGGAACTGGGCATTTCTCCCCAATCGGTGGCTACCATGCCGGACAGGATATGG
CGCTCATCTTGGATGTCGCCCGTTTCAAATATCCTCCACATTGGGTTCCATTGCAACTTC
TTTGGGAAGCCATGAATACCACTGATGACTCAACTGGACTTATCAGAGGGTTCATGCTTA
TATCAAGACAGACTGCAGCTCCTTCATCGCTGTACACAGTGAGTTGCAGAGATGAAAACT
GGAAAAGCATGGCGAAGTATTGTGTTGAAGATTTACCAAATCTTTTGAAGGCAGAGAATC
TAGACAACGTTGCAGCACTTTTGTCCCGTTTAATTGAGTCTCTTCCAGCTGATGCTGAAT
CTTTGATCAAATGGGTTGTAGAAGTTAGGAGAAAAGAGGAAGGTGGACCAAGCTTAAGCA
AAGAGGAGAAAGAAAGGCTTTTCTTGAAGGAAAATGTACTGCAGCAAGTTCGTGATACCA
GGCTATTTGCCATAGTCCATGATCAACAGAATGCTAATAAACCATGTTGTAATTGCTCAT
CACTGAGCGAAGAAGATTCCCTTACTAGGATTGCAGCCGTTGTGTGCTGTCAGGGAGCTG
CAATGCTATCAGGAAACCTTGTGCCAAGAGATGCCTTCTGCTGCAAAGAAACATGTTTGA
AATGTGTCCAAGCGAATGGTGATGGGCTCAAGACCGTTATCTCAGGCTCTGTGGTATCTG
AAGGCAGTGAGCAAGGTGTTGATATGCTTTTACCAATGTCTTCACCTAGTGCCAGTTCAT
GCAATTCAAACTTGAGGAACAATGTCATCAAATATCCATCAACCGTGGATGTTCTAACTG
TTCTTCTGCTGGCTTTACATCCCAACACGTGGTTGGGCATCAAAGATGAGAAGCTGAAAG
CTGAATTTCAGACTCTTATTTCAACTGACAGTCTACCTGATGATCTGAAACGAGAGATAT
TGCATCTAAGGCGGCAACTCTATTATCTAAAGGCCTGTAAAGAAGAGGAATGTGAAGACG
CGGAGCCACCATCGCCTAAGCAGCAAAGCTGAAGTGGCAATGTGCCCACGTCATTAATTT
ACTTACAAGAAATTGATGTCAAGAGAAAAGTTGGCAGAGTCCAGATATCAAATGAGCAGG
ATTATGATAGTAGTGTAGTGATGGTATCTTATTATTCAGGTCTGAAATTTCAAAAAAAAA
AAATCAGGTCTGGTGTTGTTTCCTTCTAAGAGAGGCTATTATCCTCCTTGCTCAAGGAGC
TCAAGGAGATGCTATTATTCTTTTTTCTGAATGATGATTAAACCATTTCTCCTTACTTGC
TTTTTGATAAACCTTGTCATATTCTCTATACTCTGAATAGATTCCTTGTATCCTATCATT
TGTATCTACGAATGTACTGTGTGTGATTAGTTCATAAGCAAAATTTCC