Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00042
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:1314659:1316756:1 gene:SORBI_3003G014600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCACCGCCGCGGCGGCCACTGCGCATGCCCGCCGCCGTCCTCCTCCTCCTCGTCCTC
TGCGCGCTGGCGGCGCTCTCCGTGTACGCAGAGGCCAAGGTGCACCACTACACGTGGGAC
ATCGCGTACCACTACAAGTCCCTCGACTGCGTCGAGAAGCTGGCGGTGACCATCAACGGC
GAGTCCCCAGGTCCGACGATCCACGCCACGCAGGGCGACACCGTGGTGGTCACCGTGCAC
AACAAGCTGGAGACGGAGAACACCGGCATCCACTGGCACGGCATCCGGCAGATCGGCTCG
CCGTGGGCCGACGGCACCGTGGGCGTCACGCAGTGCCCCATCCTCCCCGGCGACACCTTC
ACCTACCGGTTCGTCGTCGACAGGCCCGGCACCTACTTCTACCACGCCCACTACGGGATG
CAGCGCGTGGCCGGCCTCGACGGCATGCTTGTCGTGTCGTCGTCGTCGGTGCCCGACGGC
GGCGTCGCGGCGGAGCCGTTCACCTACGACGAGGAGCGCACCGTCCTGCTCATGGACTGG
TGGCACAAGAGCGTGTACGAGCAGGCCGTCGGGCTCGCGTCCGACCCGCTCAGGTTCGTC
GGCGAGCCTCAGTCCCTGCTCATCAATGGCCGAGGAGTGTTCGAGCCGTTCCACTGCTCG
CGCGCTCCCAACGGCAGTGGCGACGCCGCCTGCAACAGGCCCCGCCCTGCTGGATGCGCG
CCGCCGACGCTCTTCACGGCCGTGCCGAGGAAGACGTACCGCCTCCGCGTCGGCAGCCTG
ACGTCGCTGTCGGCGCTCAACTTCGCGATCGAGGGCCACTCCATGACGGTGGTGGAGGCC
GACGGCCACTACGTGAGGCCCGTCGTCGTCGACAGCCTCTACATCTACTCCGGCGAGTCC
TACTCCGTGCTGGTCGAGGCGGACCAGGACCCGTCCCGGAACTACTGGGCGGCGTCCCAC
GTCGTGGCCCGGGAGCGCAACACGACGAGCGCGGTGGCCATCCTCAGCTACGCCAGCAAC
GACCCGCGGGCGGCGCCGCCGACGCCGCGGCCGGAAGGACCCGCATGGGACGACGTGACG
GCCCGGGTGGAGCAGAGCAGGTCCCTCGCCGTCGCGCACCGGGACCACGTACAGCCCGTG
CCGCCGCGGCCCGACCGCGCGCTCCTCCTCCTCAACACGCAGAACCGGATCGGCGGCCAC
ACCAAGTGGGCCATCAATGGCGTTTCCCTCGCGTTCCCGGCGACGCCGTACCTGGTGTCG
ATGAAGCGCGGCCTGCGGGGCGCCTACGACGACGCGCGACCCCCGCCGGAGACGTACGAC
TACAGGAGCTACGACATCGGGAGGCCGCCGGCGGCGAACGGGACGGTGGCCAGCGCCGTG
TACCGGCTGGCGCTGGGGTCGGTGGTGGACGTGGTGCTGCAGAACACGGTGGCGCTGAAC
AACAAGAGCGAGACGCACCCGTGGCACCTCCACGGGCACGACTTCTGGGTGCTCGCCTAC
GGCGACGGCAAGTTCGACCCGGAGACGGACACGGCCAGGTTCAACCTGAGGGACCCCGTC
ATGAAGAACACGGTGGCGCTGCATCCCAAGGGGTGGACGGCGGTGAGGTTCGTGGCGGAC
AACCCCGGGGTGTGGCTGTTCCACTGTCACATCGAGGCGCACGTGTACATGGGCATGGGG
GTGGTGTTCGAGGAGGGCGTGGACAAGGTCGGCCGCTTGCCCAAGTCCATCATGGGCTGT
GGACGATCCAGGACCCTGCCTTGA

Peptide Sequence

PEP ID

EES00042
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:1314659:1316756:1 gene:SORBI_3003G014600 transcript:EES00042 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPPRRPLRMPAAVLLLLVLCALAALSVYAEAKVHHYTWDIAYHYKSLDCVEKLAVTING
ESPGPTIHATQGDTVVVTVHNKLETENTGIHWHGIRQIGSPWADGTVGVTQCPILPGDTF
TYRFVVDRPGTYFYHAHYGMQRVAGLDGMLVVSSSSVPDGGVAAEPFTYDEERTVLLMDW
WHKSVYEQAVGLASDPLRFVGEPQSLLINGRGVFEPFHCSRAPNGSGDAACNRPRPAGCA
PPTLFTAVPRKTYRLRVGSLTSLSALNFAIEGHSMTVVEADGHYVRPVVVDSLYIYSGES
YSVLVEADQDPSRNYWAASHVVARERNTTSAVAILSYASNDPRAAPPTPRPEGPAWDDVT
ARVEQSRSLAVAHRDHVQPVPPRPDRALLLLNTQNRIGGHTKWAINGVSLAFPATPYLVS
MKRGLRGAYDDARPPPETYDYRSYDIGRPPAANGTVASAVYRLALGSVVDVVLQNTVALN
NKSETHPWHLHGHDFWVLAYGDGKFDPETDTARFNLRDPVMKNTVALHPKGWTAVRFVAD
NPGVWLFHCHIEAHVYMGMGVVFEEGVDKVGRLPKSIMGCGRSRTLP

Transcript Sequence

Transcript ID

EES00042
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:1314659:1316756:1 gene:SORBI_3003G014600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGACACACACACACACACCAAGCAATATCACCTAGCTAGTACTAGTAGCTAGCTTCTTC
GACCAGTACGTTCTCTTCCATCGTTCTCGATCAGTTTCTCACGACCGACGACGTACGACA
CAATGGCACCGCCGCGGCGGCCACTGCGCATGCCCGCCGCCGTCCTCCTCCTCCTCGTCC
TCTGCGCGCTGGCGGCGCTCTCCGTGTACGCAGAGGCCAAGGTGCACCACTACACGTGGG
ACATCGCGTACCACTACAAGTCCCTCGACTGCGTCGAGAAGCTGGCGGTGACCATCAACG
GCGAGTCCCCAGGTCCGACGATCCACGCCACGCAGGGCGACACCGTGGTGGTCACCGTGC
ACAACAAGCTGGAGACGGAGAACACCGGCATCCACTGGCACGGCATCCGGCAGATCGGCT
CGCCGTGGGCCGACGGCACCGTGGGCGTCACGCAGTGCCCCATCCTCCCCGGCGACACCT
TCACCTACCGGTTCGTCGTCGACAGGCCCGGCACCTACTTCTACCACGCCCACTACGGGA
TGCAGCGCGTGGCCGGCCTCGACGGCATGCTTGTCGTGTCGTCGTCGTCGGTGCCCGACG
GCGGCGTCGCGGCGGAGCCGTTCACCTACGACGAGGAGCGCACCGTCCTGCTCATGGACT
GGTGGCACAAGAGCGTGTACGAGCAGGCCGTCGGGCTCGCGTCCGACCCGCTCAGGTTCG
TCGGCGAGCCTCAGTCCCTGCTCATCAATGGCCGAGGAGTGTTCGAGCCGTTCCACTGCT
CGCGCGCTCCCAACGGCAGTGGCGACGCCGCCTGCAACAGGCCCCGCCCTGCTGGATGCG
CGCCGCCGACGCTCTTCACGGCCGTGCCGAGGAAGACGTACCGCCTCCGCGTCGGCAGCC
TGACGTCGCTGTCGGCGCTCAACTTCGCGATCGAGGGCCACTCCATGACGGTGGTGGAGG
CCGACGGCCACTACGTGAGGCCCGTCGTCGTCGACAGCCTCTACATCTACTCCGGCGAGT
CCTACTCCGTGCTGGTCGAGGCGGACCAGGACCCGTCCCGGAACTACTGGGCGGCGTCCC
ACGTCGTGGCCCGGGAGCGCAACACGACGAGCGCGGTGGCCATCCTCAGCTACGCCAGCA
ACGACCCGCGGGCGGCGCCGCCGACGCCGCGGCCGGAAGGACCCGCATGGGACGACGTGA
CGGCCCGGGTGGAGCAGAGCAGGTCCCTCGCCGTCGCGCACCGGGACCACGTACAGCCCG
TGCCGCCGCGGCCCGACCGCGCGCTCCTCCTCCTCAACACGCAGAACCGGATCGGCGGCC
ACACCAAGTGGGCCATCAATGGCGTTTCCCTCGCGTTCCCGGCGACGCCGTACCTGGTGT
CGATGAAGCGCGGCCTGCGGGGCGCCTACGACGACGCGCGACCCCCGCCGGAGACGTACG
ACTACAGGAGCTACGACATCGGGAGGCCGCCGGCGGCGAACGGGACGGTGGCCAGCGCCG
TGTACCGGCTGGCGCTGGGGTCGGTGGTGGACGTGGTGCTGCAGAACACGGTGGCGCTGA
ACAACAAGAGCGAGACGCACCCGTGGCACCTCCACGGGCACGACTTCTGGGTGCTCGCCT
ACGGCGACGGCAAGTTCGACCCGGAGACGGACACGGCCAGGTTCAACCTGAGGGACCCCG
TCATGAAGAACACGGTGGCGCTGCATCCCAAGGGGTGGACGGCGGTGAGGTTCGTGGCGG
ACAACCCCGGGGTGTGGCTGTTCCACTGTCACATCGAGGCGCACGTGTACATGGGCATGG
GGGTGGTGTTCGAGGAGGGCGTGGACAAGGTCGGCCGCTTGCCCAAGTCCATCATGGGCT
GTGGACGATCCAGGACCCTGCCTTGAGCTTCCCCCCCTTTTTTTTTTTTTAAAAAAAAAA
AGCCTTGAGCTAGGTAAACCGGGCGCCGCCATCACATGACAACATTTTTTCGTGACCAAT
TCTTTATATTTGTGTACAGTTTGTAATAAGCCAACCAATTTGTTTCAATAATTTTTAAGA
CTGTATCTTGTACTGCTAGTACTGTTACTAAGTGATAAATAAAGCTCTTGGATTTCTT