Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES00013
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:781519:785169:1 gene:SORBI_3003G008600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCCCCCTACGACCGCGAGGACGGCCTGCCGCCGTCGGTGCCGCCGCACGCG
GCCGACGCGTACGACCCCAACTACGTGCCGGACTCCGTGAAGACGTTCGTGGTGCACCTG
TACCGCCACATCCGGGACAAGAACGTGTACGAGATCCACCAGATGTACGAGGGCGGCTTC
CAGCGCCTCTCCGACCGCCTCTTCCGCGACGCGCCCTGGCCCTCCGCGGAGGCCGTCGCC
CCCTACTGCGACGGCGACCACGTCTTCCTCCTCCTCTACCGCGAGCTCTGGTACCGCCAC
GCCCACGCCCGCCTCTCCCCGCTCACCGCCGCGCACCGCGCCGAGTCATGGACCAACTAC
TGCGACCTCTTCAGCGTCGTCCTCCACGGCGTCGTCAACATGCAGCTGCCCAACCAGTGG
CTCTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCC
AAGCTCAAGACCAAGACGGAGGACGAGCTCAGCCAGCTCAAGCAGTTCGAAAAGGCCTGG
AACGTCTACGGGGTCCTCAACTACCTGAAGGCGCTGGTCGAGAAGTCCATGATCACGCAG
ATCCTCGAGAGGGAGAAGGAGGGCCTGGAGCAGTTCACCGCCACAGATGGTTACGACTAC
GAGGGTGGCAGCAACGTGCTCAAAGTGCTCGGCTACTACAGCATGATTGGCCTCCTCAGG
ATACACTGCCTCCTCGGGGATTACCACACTGGCCTCAAGTGCCTCGCGCCCATCGACCTC
AACCAGCAAGGGGTCTACACCATTGTCATTGGGAGCCACATCTCCACCATCTACCACTAT
GGCTTCGCCAACCTTATGATGCGCAGGTACGTTGAGGCCACTCGTGAATTCAACAAGATT
CTTCTGTATATCCTCAAGTACAAGCAGTACCATCAGAAGTCCCCTCAGTATGATCAGATA
CTGAAGAAAAATGAGCAAATGTATGCATTGTTGGCAATTTGCCTATCTTTGTGCCCACAG
AACAAGCTCATTGATGAAAATGTTAGCACCCAGCTGAAAGAAAAGTATAATGACAAGATG
ACAAAGATGCAGAGATATGATGATGAAGCATATGCTGCTTATGATGAGCTATTTTCTTAT
GCTTGCCCCAAGTTCATTACACCATCACCTCCAGTTCTGGACCAGCCACTAACAAACTAT
AACCAGGATGCATACCGCCTTCAGTTGAAGTTGTTTCTCTATGAAGTAAAGCAGCAGCAG
TTGCTTTCTGGGATCCGGAGTTATCTAAAGCTATATTCAACAATAACAATTAGCAAACTT
GCCCAATATATGGAAATGGATGAAGCAACACTAAGGTCAATCCTGATGACATACAAGCAC
AAAATGCATGCAGTTGACAGTGACGGGAAGATAGTATCGAGTGCAGACTTTGACTTCTAC
ATTGTTGAGGATGTTATTCATGTTGTGGAGTCCAAACCTACCAAGCGTCATGGTGATTAC
TTTTTGAGACAAATTTTGAAGTTTGAGGAAATGATTGGTGAACTGGAGAAAGTACAGCTT
GACTGA

Peptide Sequence

PEP ID

EES00013
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:781519:785169:1 gene:SORBI_3003G008600 transcript:EES00013 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAPYDREDGLPPSVPPHAADAYDPNYVPDSVKTFVVHLYRHIRDKNVYEIHQMYEGGF
QRLSDRLFRDAPWPSAEAVAPYCDGDHVFLLLYRELWYRHAHARLSPLTAAHRAESWTNY
CDLFSVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKLKTKTEDELSQLKQFEKAW
NVYGVLNYLKALVEKSMITQILEREKEGLEQFTATDGYDYEGGSNVLKVLGYYSMIGLLR
IHCLLGDYHTGLKCLAPIDLNQQGVYTIVIGSHISTIYHYGFANLMMRRYVEATREFNKI
LLYILKYKQYHQKSPQYDQILKKNEQMYALLAICLSLCPQNKLIDENVSTQLKEKYNDKM
TKMQRYDDEAYAAYDELFSYACPKFITPSPPVLDQPLTNYNQDAYRLQLKLFLYEVKQQQ
LLSGIRSYLKLYSTITISKLAQYMEMDEATLRSILMTYKHKMHAVDSDGKIVSSADFDFY
IVEDVIHVVESKPTKRHGDYFLRQILKFEEMIGELEKVQLD

Transcript Sequence

Transcript ID

EES00013
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:781519:785169:1 gene:SORBI_3003G008600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGCCCCCCATCTCGTCCTCCTCCGACCCACCCCGCGCCGCCGCACCCCGAACCCTAAC
CCCTCGCCTCGCCTCCCACCATGGCGGCCGCCCCCTACGACCGCGAGGACGGCCTGCCGC
CGTCGGTGCCGCCGCACGCGGCCGACGCGTACGACCCCAACTACGTGCCGGACTCCGTGA
AGACGTTCGTGGTGCACCTGTACCGCCACATCCGGGACAAGAACGTGTACGAGATCCACC
AGATGTACGAGGGCGGCTTCCAGCGCCTCTCCGACCGCCTCTTCCGCGACGCGCCCTGGC
CCTCCGCGGAGGCCGTCGCCCCCTACTGCGACGGCGACCACGTCTTCCTCCTCCTCTACC
GCGAGCTCTGGTACCGCCACGCCCACGCCCGCCTCTCCCCGCTCACCGCCGCGCACCGCG
CCGAGTCATGGACCAACTACTGCGACCTCTTCAGCGTCGTCCTCCACGGCGTCGTCAACA
TGCAGCTGCCCAACCAGTGGCTCTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGA
GCTTCTGCCAGTACCGCGCCAAGCTCAAGACCAAGACGGAGGACGAGCTCAGCCAGCTCA
AGCAGTTCGAAAAGGCCTGGAACGTCTACGGGGTCCTCAACTACCTGAAGGCGCTGGTCG
AGAAGTCCATGATCACGCAGATCCTCGAGAGGGAGAAGGAGGGCCTGGAGCAGTTCACCG
CCACAGATGGTTACGACTACGAGGGTGGCAGCAACGTGCTCAAAGTGCTCGGCTACTACA
GCATGATTGGCCTCCTCAGGATACACTGCCTCCTCGGGGATTACCACACTGGCCTCAAGT
GCCTCGCGCCCATCGACCTCAACCAGCAAGGGGTCTACACCATTGTCATTGGGAGCCACA
TCTCCACCATCTACCACTATGGCTTCGCCAACCTTATGATGCGCAGGTACGTTGAGGCCA
CTCGTGAATTCAACAAGATTCTTCTGTATATCCTCAAGTACAAGCAGTACCATCAGAAGT
CCCCTCAGTATGATCAGATACTGAAGAAAAATGAGCAAATGTATGCATTGTTGGCAATTT
GCCTATCTTTGTGCCCACAGAACAAGCTCATTGATGAAAATGTTAGCACCCAGCTGAAAG
AAAAGTATAATGACAAGATGACAAAGATGCAGAGATATGATGATGAAGCATATGCTGCTT
ATGATGAGCTATTTTCTTATGCTTGCCCCAAGTTCATTACACCATCACCTCCAGTTCTGG
ACCAGCCACTAACAAACTATAACCAGGATGCATACCGCCTTCAGTTGAAGTTGTTTCTCT
ATGAAGTAAAGCAGCAGCAGTTGCTTTCTGGGATCCGGAGTTATCTAAAGCTATATTCAA
CAATAACAATTAGCAAACTTGCCCAATATATGGAAATGGATGAAGCAACACTAAGGTCAA
TCCTGATGACATACAAGCACAAAATGCATGCAGTTGACAGTGACGGGAAGATAGTATCGA
GTGCAGACTTTGACTTCTACATTGTTGAGGATGTTATTCATGTTGTGGAGTCCAAACCTA
CCAAGCGTCATGGTGATTACTTTTTGAGACAAATTTTGAAGTTTGAGGAAATGATTGGTG
AACTGGAGAAAGTACAGCTTGACTGAACCTCATAGCGATCATGGAGAGAAATGCCACTGC
TTCCTTTTTGCTAATATAGGAAGAAGTGTTTATGATGGATGTCATTAGCAAGTTATGTTT
GTGCCTTTTGTACTCCATGCGACTTAGTTGGAAACCCTTTTTTTCTTTTTGCTGAAATCG
ACTTTGAAAGACCGTTGAGGCCATTAGCTGAGTCGTGATACTTATTTGGGTTGCCCAGTT
GCCTGAATATTTCATATCCCATCACGGAGTGGCATGCAAATTGAGCTGTGCCAGCATGCC
CTATAGGCTATAGCTAACAAGGATCGGTGCCAAGGTGAACAAATTTGTACCAATGGGAAT
TTAGATGCGTCTCTCGTCAGCACAACATTATTGACTCTCATCTACTTAGGGGGTGTTTAG
TTCTGCTTTTATTCTAAAATTTTTTGGGTTTTGGTTCATCATTTTGTATAATGGAACTAA
ACACTATGCAATTTTTTTGGAAAAATAATGGTTAT