Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99960
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:77448582:77453696:-1 gene:SORBI_3002G428100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACAACAGCGCTGCTCCGGGCTCTCCGGCGGCCCTCGTCCGAAGCCGCGCTGCGA
TTGGCTACAAGGGCAAATGTGCAAACAACTAATGGATATAGACATCTGAATAACAGGAAT
CTAAGTGTTTTCAATGAGTTTTCTAAGCAACTAAAGGGTGAGGCCAAGAGTAATCCTGAA
TTCCAGAAATCCATGAAGGAGTTCGGTGAGAAACTTGGTGTGGTGAAGGAAGATCTCAAA
GTAAGAACTAAGAAAACGACTGAGACAATATACAAGAGTGTTGATGATGTTTGGAGTGAA
GCTGAGGAGACATCTAAAAAGGTTACTGCAAATATCAAAGAAAAAATGTTTGCTGCTAAA
GAAGAGGTAAAGGAAAGTTTTGGAGTCGGAAAAGAAGAGAGTACAAGTTGCAGGGATGGT
TCGCCTGAAGCTTCAAAACATGAGAAAACTGGGACATCCTCGCATTCAGATGGCACGTCT
GAAGATGCCACAAACAGCCATACATTGTTCACTAAATTGAAGTCAACAATCTCATCTGCT
TCACCAGTGGTATCCGGCGCATTTGCAAAGTTGAAGGACACAAAAGTCTCAACTTTAGCT
AAGCAGGGATATGAAATCGTCAAGGATGAATTAAGCTCTAGCTCTAGCAGAAAGAAAAAA
CATCAAGCTAGGCATGCATCTGCTAAAGTAGAAAAGAGTACAAGAACCGATTTAGTTCTT
ACGCCAACAAAAAGGACAGTATTGGGTGAAAAATGGGAAGCATTTAAGAATAAGATCCAA
GGTCACCCCGTCTATAAAAGAGTGGATGAATACACCAAGCCTGTTGTAACAAAGGGACAA
GAGGTTGCTGAAGATGTCAGGGAAAGATGGGAGACAAGTGACAATCCAGTGGTTCAGAAA
ATTCAAGACTTGAATGAATCTTTGCTTGAAGAAACCTCAGCTGCGGTGACATTCAGGGAA
ATTCGGCAACGAGACCCGTCCTTTTCTCTTTCTGATTTTGTTGCCGATGTCCAAGAAACG
ATCAAGCCAGTTCTAACTGCATATTCAAAGGGTGATGTGGAGACTCTAAAAAAATATTGC
ACCAAGGAAGTGATTGAGCGCTGCAAAGGAGAGAGAGAAGCTTATGCATCACAGGGAATA
TTTTTTGATCACAAAATCCTGCACATTTCAGAAGCTGATGTATTGGAAACAAAAATGTTT
GGATCTTCACCCATAATTATCTTACGCTTCCAAACTCAGCAGATATACTGTGTCCGAGAT
CGAGAAGGACAAGTCACAGAAGGAGGACAGGATACCATCCAAACCGTCTTCTATTCGTGG
GCTATGCAACTCATGGACAGTGACGAGGTGCCAGAAGAAGAATCCTATTACCCAGTCTGG
CGGTTGCGTGAGATGCAACAAGCTGGCATAAAAGCTCTCATATAG

Peptide Sequence

PEP ID

EER99960
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:77448582:77453696:-1 gene:SORBI_3002G428100 transcript:EER99960 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATTALLRALRRPSSEAALRLATRANVQTTNGYRHLNNRNLSVFNEFSKQLKGEAKSNPE
FQKSMKEFGEKLGVVKEDLKVRTKKTTETIYKSVDDVWSEAEETSKKVTANIKEKMFAAK
EEVKESFGVGKEESTSCRDGSPEASKHEKTGTSSHSDGTSEDATNSHTLFTKLKSTISSA
SPVVSGAFAKLKDTKVSTLAKQGYEIVKDELSSSSSRKKKHQARHASAKVEKSTRTDLVL
TPTKRTVLGEKWEAFKNKIQGHPVYKRVDEYTKPVVTKGQEVAEDVRERWETSDNPVVQK
IQDLNESLLEETSAAVTFREIRQRDPSFSLSDFVADVQETIKPVLTAYSKGDVETLKKYC
TKEVIERCKGEREAYASQGIFFDHKILHISEADVLETKMFGSSPIIILRFQTQQIYCVRD
REGQVTEGGQDTIQTVFYSWAMQLMDSDEVPEEESYYPVWRLREMQQAGIKALI

Transcript Sequence

Transcript ID

EER99960
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:77448582:77453696:-1 gene:SORBI_3002G428100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGGCCTTAGCTTGCACTACAAGAAATATAACCAACAATCTATGATCAGTTCGTAAAAAAT
AATAAATAAACTGCAATGGAAAAGCTTTGAAATAGAGTGGCCCATGCGAAGGCCCGTCGG
GCTGGGCCGAACAACCCCGGACTTGGCTACCCGCGTCCGCGTGTGCTGTCTCTCTCTGCA
ACGACTGGGTACAGCCGCCGCCGCCGCCGCCGCCGCCCTACGCCAGGTACCGAGGCCTTC
GCCGCCGACGAGCACCCACCACCAGGTATTCCGACCCCTTTCTCTCCCCTTGCTGCCGTG
CGAAACCGAGCACCCAAACCCTAAGTTATTTGGCTATTTGATGCCTACAAACTTCTAACT
TTTTGCAAAATCTGTCGGCTCTACATGTGTCCGTCCATGCTAGGGATGGCGACAACAGCG
CTGCTCCGGGCTCTCCGGCGGCCCTCGTCCGAAGCCGCGCTGCGATTGGCTACAAGGGCA
AATGTGCAAACAACTAATGGATATAGACATCTGAATAACAGGAATCTAAGTGTTTTCAAT
GAGTTTTCTAAGCAACTAAAGGGTGAGGCCAAGAGTAATCCTGAATTCCAGAAATCCATG
AAGGAGTTCGGTGAGAAACTTGGTGTGGTGAAGGAAGATCTCAAAGTAAGAACTAAGAAA
ACGACTGAGACAATATACAAGAGTGTTGATGATGTTTGGAGTGAAGCTGAGGAGACATCT
AAAAAGGTTACTGCAAATATCAAAGAAAAAATGTTTGCTGCTAAAGAAGAGGTAAAGGAA
AGTTTTGGAGTCGGAAAAGAAGAGAGTACAAGTTGCAGGGATGGTTCGCCTGAAGCTTCA
AAACATGAGAAAACTGGGACATCCTCGCATTCAGATGGCACGTCTGAAGATGCCACAAAC
AGCCATACATTGTTCACTAAATTGAAGTCAACAATCTCATCTGCTTCACCAGTGGTATCC
GGCGCATTTGCAAAGTTGAAGGACACAAAAGTCTCAACTTTAGCTAAGCAGGGATATGAA
ATCGTCAAGGATGAATTAAGCTCTAGCTCTAGCAGAAAGAAAAAACATCAAGCTAGGCAT
GCATCTGCTAAAGTAGAAAAGAGTACAAGAACCGATTTAGTTCTTACGCCAACAAAAAGG
ACAGTATTGGGTGAAAAATGGGAAGCATTTAAGAATAAGATCCAAGGTCACCCCGTCTAT
AAAAGAGTGGATGAATACACCAAGCCTGTTGTAACAAAGGGACAAGAGGTTGCTGAAGAT
GTCAGGGAAAGATGGGAGACAAGTGACAATCCAGTGGTTCAGAAAATTCAAGACTTGAAT
GAATCTTTGCTTGAAGAAACCTCAGCTGCGGTGACATTCAGGGAAATTCGGCAACGAGAC
CCGTCCTTTTCTCTTTCTGATTTTGTTGCCGATGTCCAAGAAACGATCAAGCCAGTTCTA
ACTGCATATTCAAAGGGTGATGTGGAGACTCTAAAAAAATATTGCACCAAGGAAGTGATT
GAGCGCTGCAAAGGAGAGAGAGAAGCTTATGCATCACAGGGAATATTTTTTGATCACAAA
ATCCTGCACATTTCAGAAGCTGATGTATTGGAAACAAAAATGTTTGGATCTTCACCCATA
ATTATCTTACGCTTCCAAACTCAGCAGATATACTGTGTCCGAGATCGAGAAGGACAAGTC
ACAGAAGGAGGACAGGATACCATCCAAACCGTCTTCTATTCGTGGGCTATGCAACTCATG
GACAGTGACGAGGTGCCAGAAGAAGAATCCTATTACCCAGTCTGGCGGTTGCGTGAGATG
CAACAAGCTGGCATAAAAGCTCTCATATAGAGCATTTCATCATTTTGTTCTACTCTTCCT
TCATTGAATCAGCTGCTCAATGAGCAATGTGCACGAACGTTGCCCTCGGTGCAAGAAATT
TTCCACAGATTGTTTTATATATATATATGTCCTGATGGTAGCAGTTTCTTCCTATTCTTT
TTTGCTGATGTATCTAACGCATGTCACTCGCAGAGTTAGCTGTTATTCTCAATGTTGGCT
GAGAAAGGCTTGTAAGCAGCATATACTGATAGTAACTTTGTTTTTGCCCCAACTGGAAAT
GAAACACACGTCGGTGTGGTGTTGTCAAGACTGCCAGAGGCACTGGGCACTGCCAAAAAT
ATGTGACTGTAATGCCCAAGA