Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99942
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:77168383:77172155:-1 gene:SORBI_3002G424900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGTCACCCCCGCGGCTGCGGCCGCCGCCGGCGAGTGTGCGGGCCTTCCTGGACGCG
CACTTCGCGTCCCCCGACGACCTCGCGGCCGCGCCCGCGCTCGCGGAGCTCCTGCGCCGC
GAGTGCGCCGGGCTCGACGCCTCGCTCCGCCGCGCCGAGGCGCGCCTCGGTGCCGCGGCC
GCGTCCTGGCTCGCGCGCTCCGCCGAGGCCCGCGCCGACCTCCTCCGCGTCCGGTCACGA
GGGGTGCGCGTCCGAGCGGAGGACGACGGCGCCGAGGCGGCCAGGACGGTGGGGCTGCCG
GCGCTTGTGCGGGAGATCCAACGGATCGACACCATCCGGCTCTACGCGGAAGCTACTCTA
CAGTTGGAAGCTTTGGTTGGCAACCTGGAAGATGTGGCATTTTCCATCGTTAGGCAGGCC
CCAAAGTTCAACCTATCATCCATACTTCGAAAATCAAATGAAACAGAATGGAAGCAAGGG
AAGCTCCTCCACGCTGTCGATGCTGTGAGGGATATTGAGCGAGAATTAGTACGGATCAGC
ACTAGTAGGCCGCAGTGGACCAACCTTGTCGTGGCTGTTGATTCTAGAGTGGACAAAACT
CTTTCCATTTTGAGGCCTCAAGCACTCACGGATTATCGGGCTCTACTAGCATCACTAGGC
TGGCCACCTTCATTGTCTTCATCAGACACAGAGAAGGATAAGTACTCCCAAATTCCGAAT
CCTCTAGTCTTGATGAATAAAGAAAACAAAGAGAGATACTCTCAAAGCTTCCAAGCACTG
TGTGCTCTCCAACATGTGCAGGGCAACCGTGAATTGCGCCTGTGTCAAACAGCAGAAGTG
ACTCCTGCCCTGGCAGATTTTAAGTACTTCAATAGGACTGCTTGCTTCGACAATGGGCTT
TGGGCGATAGATGAATTGGTTCACCCTATTGCTTCAAGGATGGAATATCATTTTGCGAAA
TGGTCTGAACAGCCAGAGTTCATTTTTACCCTTGTTTACAAGATAACAAAGGATTTCATG
GATGGGGTGGATGATGTCCTGCAGCCTTTGATTGATCGAGCAAGGCTAGTGGGATTAAGT
GCCAAGGAATCTTGGGTAACTGGAATGGTGAAAATGCTTGTAGGATACCTTGAGCGGCAG
ATTTTCCCAGCACTTGTCTGCTCTTATCAGGATCATGCTACTGTTGGCAAACCTGAAGTA
GATTCCTCTTGGATGCACTTAAATGACGTAATGATTTCTTTTGATAAAAGAATGCAGCTT
CTTGCGGATTCAGGAATCCAGAAAATAGCATCTCTTTCTGAAGGTCTGTCTAGGTCCTTA
TCTGTCTTTTCAATATATACTGAGCACCCTGATTGGCTTCAGATATGGGCTGATGTTGAG
CTTAGTTCAGCACAGGATAAGCTGAAATCTGAAATGGAAGATGAGACAAGTTGGTCATGT
AGTGGTCAGCATGACCAGCTTGGTCACATGGAAAATTCAATGAAGTTTCTTCTCTCTACA
AGAGAAGACTACAAAGCTCCTCCGGTGTGTGAATTTGTTATCAAAACTGCTTTGTCAATG
GTTGAAAGAGGCCGTGCTCTGCCAAACAGGGGAATGCAGATCCAGTATAACAGATCCTCT
TCAGTTAGGTTCCTGAATGACTTTTTTCTTGTCTTGCGTGAACGATGCGAAGCATTGCAA
TTGTCGAATACGGCATTAGAAGATCAGTCTTTGTCAAAAACTTCGTGTGCAATCAACGCC
GCTCGTTACTGCGAGAATGTTCTTCGGGAATGGGATGAAGATACTACCTTCTTGGATATG
GGTCCTCATGGATCTCTGTTTACAGATGAAATCAGCTTTTTAGTTAAATTAGGGACCAAT
TACCTGGAACAGATACTGTCTTCGGTTCTGCTTGAGTTTGAAGATCTGTCCTGGGAATAT
GTCCAGAACATTGGATCATGGAGTGGACAGACCATCTTAGATGATCAGACCTTGGATGAA
GAAAATGCAGGAGTATCTCCTGGTTTTGTTGCCAGTCTAGATGTTCTGACAGACAGGACC
ACTAAGTTGAAGCGATATCTTAATTCCAAGGATTTCCTTGATCTCTGGAGGAGTATAGCG
GAAGGCCTCGACTACTTCATCTACAGCAGCATACAATGGGGTGAAGTAAGTTTCTCTGAT
CCTGGAGTCATCCAGCTAAGAGTTGATACCAAAGCCCTTCTCCACATCTTTAGGCCCTTC
TGTTCAAGACCTGAAGCTTTTCTCCCTTTTCTAAGTGAATCCCTGAGGTTATTGACCATG
AAAAAGTCAGATGCACAGGGCTTGCTGGAAGTGCTAACGGATGACACGAAGAGTGACAAT
TGCCTAAAGCAGCAAGGATTGCACCATGTAAATTCTAGCCAGGCTGCAAAAATCTTAAGC
AGCAGGAAGTTTTGTGGGTAA

Peptide Sequence

PEP ID

EER99942
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:77168383:77172155:-1 gene:SORBI_3002G424900 transcript:EER99942 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSPPRLRPPPASVRAFLDAHFASPDDLAAAPALAELLRRECAGLDASLRRAEARLGAAA
ASWLARSAEARADLLRVRSRGVRVRAEDDGAEAARTVGLPALVREIQRIDTIRLYAEATL
QLEALVGNLEDVAFSIVRQAPKFNLSSILRKSNETEWKQGKLLHAVDAVRDIERELVRIS
TSRPQWTNLVVAVDSRVDKTLSILRPQALTDYRALLASLGWPPSLSSSDTEKDKYSQIPN
PLVLMNKENKERYSQSFQALCALQHVQGNRELRLCQTAEVTPALADFKYFNRTACFDNGL
WAIDELVHPIASRMEYHFAKWSEQPEFIFTLVYKITKDFMDGVDDVLQPLIDRARLVGLS
AKESWVTGMVKMLVGYLERQIFPALVCSYQDHATVGKPEVDSSWMHLNDVMISFDKRMQL
LADSGIQKIASLSEGLSRSLSVFSIYTEHPDWLQIWADVELSSAQDKLKSEMEDETSWSC
SGQHDQLGHMENSMKFLLSTREDYKAPPVCEFVIKTALSMVERGRALPNRGMQIQYNRSS
SVRFLNDFFLVLRERCEALQLSNTALEDQSLSKTSCAINAARYCENVLREWDEDTTFLDM
GPHGSLFTDEISFLVKLGTNYLEQILSSVLLEFEDLSWEYVQNIGSWSGQTILDDQTLDE
ENAGVSPGFVASLDVLTDRTTKLKRYLNSKDFLDLWRSIAEGLDYFIYSSIQWGEVSFSD
PGVIQLRVDTKALLHIFRPFCSRPEAFLPFLSESLRLLTMKKSDAQGLLEVLTDDTKSDN
CLKQQGLHHVNSSQAAKILSSRKFCG

Transcript Sequence

Transcript ID

EER99942
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:77168383:77172155:-1 gene:SORBI_3002G424900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCTCTCTCTCGCCCGCCTCCCAACCCAACGCTCCCATCCCATGCCGTCACCCCCGCGGC
TGCGGCCGCCGCCGGCGAGTGTGCGGGCCTTCCTGGACGCGCACTTCGCGTCCCCCGACG
ACCTCGCGGCCGCGCCCGCGCTCGCGGAGCTCCTGCGCCGCGAGTGCGCCGGGCTCGACG
CCTCGCTCCGCCGCGCCGAGGCGCGCCTCGGTGCCGCGGCCGCGTCCTGGCTCGCGCGCT
CCGCCGAGGCCCGCGCCGACCTCCTCCGCGTCCGGTCACGAGGGGTGCGCGTCCGAGCGG
AGGACGACGGCGCCGAGGCGGCCAGGACGGTGGGGCTGCCGGCGCTTGTGCGGGAGATCC
AACGGATCGACACCATCCGGCTCTACGCGGAAGCTACTCTACAGTTGGAAGCTTTGGTTG
GCAACCTGGAAGATGTGGCATTTTCCATCGTTAGGCAGGCCCCAAAGTTCAACCTATCAT
CCATACTTCGAAAATCAAATGAAACAGAATGGAAGCAAGGGAAGCTCCTCCACGCTGTCG
ATGCTGTGAGGGATATTGAGCGAGAATTAGTACGGATCAGCACTAGTAGGCCGCAGTGGA
CCAACCTTGTCGTGGCTGTTGATTCTAGAGTGGACAAAACTCTTTCCATTTTGAGGCCTC
AAGCACTCACGGATTATCGGGCTCTACTAGCATCACTAGGCTGGCCACCTTCATTGTCTT
CATCAGACACAGAGAAGGATAAGTACTCCCAAATTCCGAATCCTCTAGTCTTGATGAATA
AAGAAAACAAAGAGAGATACTCTCAAAGCTTCCAAGCACTGTGTGCTCTCCAACATGTGC
AGGGCAACCGTGAATTGCGCCTGTGTCAAACAGCAGAAGTGACTCCTGCCCTGGCAGATT
TTAAGTACTTCAATAGGACTGCTTGCTTCGACAATGGGCTTTGGGCGATAGATGAATTGG
TTCACCCTATTGCTTCAAGGATGGAATATCATTTTGCGAAATGGTCTGAACAGCCAGAGT
TCATTTTTACCCTTGTTTACAAGATAACAAAGGATTTCATGGATGGGGTGGATGATGTCC
TGCAGCCTTTGATTGATCGAGCAAGGCTAGTGGGATTAAGTGCCAAGGAATCTTGGGTAA
CTGGAATGGTGAAAATGCTTGTAGGATACCTTGAGCGGCAGATTTTCCCAGCACTTGTCT
GCTCTTATCAGGATCATGCTACTGTTGGCAAACCTGAAGTAGATTCCTCTTGGATGCACT
TAAATGACGTAATGATTTCTTTTGATAAAAGAATGCAGCTTCTTGCGGATTCAGGAATCC
AGAAAATAGCATCTCTTTCTGAAGGTCTGTCTAGGTCCTTATCTGTCTTTTCAATATATA
CTGAGCACCCTGATTGGCTTCAGATATGGGCTGATGTTGAGCTTAGTTCAGCACAGGATA
AGCTGAAATCTGAAATGGAAGATGAGACAAGTTGGTCATGTAGTGGTCAGCATGACCAGC
TTGGTCACATGGAAAATTCAATGAAGTTTCTTCTCTCTACAAGAGAAGACTACAAAGCTC
CTCCGGTGTGTGAATTTGTTATCAAAACTGCTTTGTCAATGGTTGAAAGAGGCCGTGCTC
TGCCAAACAGGGGAATGCAGATCCAGTATAACAGATCCTCTTCAGTTAGGTTCCTGAATG
ACTTTTTTCTTGTCTTGCGTGAACGATGCGAAGCATTGCAATTGTCGAATACGGCATTAG
AAGATCAGTCTTTGTCAAAAACTTCGTGTGCAATCAACGCCGCTCGTTACTGCGAGAATG
TTCTTCGGGAATGGGATGAAGATACTACCTTCTTGGATATGGGTCCTCATGGATCTCTGT
TTACAGATGAAATCAGCTTTTTAGTTAAATTAGGGACCAATTACCTGGAACAGATACTGT
CTTCGGTTCTGCTTGAGTTTGAAGATCTGTCCTGGGAATATGTCCAGAACATTGGATCAT
GGAGTGGACAGACCATCTTAGATGATCAGACCTTGGATGAAGAAAATGCAGGAGTATCTC
CTGGTTTTGTTGCCAGTCTAGATGTTCTGACAGACAGGACCACTAAGTTGAAGCGATATC
TTAATTCCAAGGATTTCCTTGATCTCTGGAGGAGTATAGCGGAAGGCCTCGACTACTTCA
TCTACAGCAGCATACAATGGGGTGAAGTAAGTTTCTCTGATCCTGGAGTCATCCAGCTAA
GAGTTGATACCAAAGCCCTTCTCCACATCTTTAGGCCCTTCTGTTCAAGACCTGAAGCTT
TTCTCCCTTTTCTAAGTGAATCCCTGAGGTTATTGACCATGAAAAAGTCAGATGCACAGG
GCTTGCTGGAAGTGCTAACGGATGACACGAAGAGTGACAATTGCCTAAAGCAGCAAGGAT
TGCACCATGTAAATTCTAGCCAGGCTGCAAAAATCTTAAGCAGCAGGAAGTTTTGTGGGT
AATCTTGTTTGTACAAAGTGTAGCTGAGAATGACCTTCAGCGAAGCTTGATGTGAAAACT
TTTATACTTGGAGATTAACATTTCCAGACCACAACAAAGACGGGTGCACTAACCAAGGAG
CCGTCGCAATTGGCACATATGGCACACAACAGTGCCTTCCAAGGCTGACAGGATTTGACC
ACTGCTGTTTGGCTACTTCCTGGAATTCTTCAGGCGATAACTGGAGAGGGCCGTTCACGG
AGTTTTACTTTATCTGCAAGCACGAAGCTGCCATGTATAATCAGCCCAATTTTTTACAAT
TTGGCCCTTTTTTTAAAGAAATTTCTCTTTTGGATCCCTAGAAAACTTAAATGCAGAATT
G