Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99915
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:76615451:76620614:-1 gene:SORBI_3002G418300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGACGACGACGGCGGCCAGGCGGCGGCGGCGGCTGCTGCTGCTCCTGGTCCTGCTG
GCGCTCGCGGCGCACCGTGCGGCGGCGCGGTTCGTGGTGGAGAAGAACAGCCTGCGGGTC
ACGTCCCCGGCCGCGCTCCGGGGCGTCTACGAGTGCGCCATCGGCAACTTCGGCATGCCG
CAGTACGGCGGCACCATGCACGGCGTCGTCGTCTACCCCAAGGTCGATGCCAAGGCCTGC
AGGCCCTTCGACGCCTCCGGCCTCTCCTTCAAGCCCAAGTCCGGCGGTCTGCCCGTCTTT
CTACTCGTCGATCGCGGAGACTGCTACTTCACAACCAAGGGATGGAATGCACAAAATGCT
GGAGCTGCAGCAGTTCTTGTTGCCGACGACAAAGTCGAGCCTTTGATCACAATGGATTCT
CCAGAATCCAGTGGCACAGAGCACATTGAGAACATCACAATTCCTTCGGCACTTGTGACC
AAGAGATTTGGAGACGACCTCAGGAAAGCACTGCAAAATGGAGAAATGGTGAATGTTCTT
CTGGACTGGAGGGAATCTCTGCCCCATCCTGATGAGCGTGTGGAGTATGAGTTCTGGACA
AACAGCAATGATGAATGCGGTGCTAAATGTGACATGCAAATGAACTTCGTGAGGAGCTTC
AGAGGAATAGCTCAGGCCCTTGAGAAAAGGGGTTACACCCAGTTCACCCCTCACTATATC
ACATGGTATTGTCCAGAAGCTTTTATCCTGAGCAAACAGTGCAAGTCACAATGTATCAAT
CATGGCAGATATTGCGCACCAGATCCAGAGCAGGATTTCAGCATTGGATATGACGGCAAA
GATGTTGTGGTTCAGAACCTGATTCAAATTTGCGTGTTCAGAGTTGCCAATGAAACTCGC
AGGCCGTGGATGTGGTGGGATTATGTGCACGACTTTGCTGTTAGGTGCCCAATGAAGGAG
AAGAAATACACACGTGAATGTGCACATGGTGTTATCAATTCACTTGGATTGGACATTGAG
AAAATCAACAAGTGTGTTGGAGATCCTGACGCCGATAAAGAAAATCCAGTCCTCAAAGCA
GAACAGGATGCTCAAATTGGGCATGGTTCTCGCGGCGATGTAACTATACTGCCAACTCTT
GTCGTCAATAACAGACAATACAGAGGCAAACTGGAAAAAAGATCTGTGCTGAAAGCAGTA
TGCTCGGGATTTGAGGAGACAACCGAACCTGATGTCTGTTTGCGCGAAGATATTGAGACA
AATGAATGTTTGGAGAACAATGGAGGTTGCTGGTTAGACAAGGCTACCAATGTTTCTGCG
TGCAAGGATACCTTCCGTGGTCGTGTTTGTGAATGCCCTACTGTCAATGGTGTAAAGTTT
ATAGGTGATGGGTACAGCCACTGTGAAGCTTCTGGTCTCGGTAGGTGCCAGATCAACAAT
GGGGGCTGCTGGAACGAGACTAGGAACGGGAAGACTGTCTCTGCCTGCTCAAATCAAGAA
GCTAAAGGCTGCAAATGCCCATCAGGTTTCAGGGGTGACGGAATGAACAGTTGCGAAGAT
GTCGATGAATGCAAAGAGAAGCTTTTCTGCCAGTGCAAGGATTGCGCTTGTGAGAACACA
TGGGGAAGCTACGAGTGCAGCTGCGGTGGCAGCAATTCGCTATACATCAGAGAGCATGAT
ACCTGTATCAGCAAACAGTCTAGTTCGTCCCTGGGCTGGGGCTTCCTATGGGTGATTTTC
ATCGGCCTTGCCTTGGCTGGAGCAGGAGCATACGCCGTGTACAAATACAGGCTACGGAGC
TACATGGATTCAGAGATCCGTGCGATCATGGCCCAGTACATGCCCCTGGAGAGCCAAGAG
ATGCCGAACCAACATCGCTCTGTCGTCCCCGTCGACCACGCAGACATCTGA

Peptide Sequence

PEP ID

EER99915
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:76615451:76620614:-1 gene:SORBI_3002G418300 transcript:EER99915 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

METTTAARRRRRLLLLLVLLALAAHRAAARFVVEKNSLRVTSPAALRGVYECAIGNFGMP
QYGGTMHGVVVYPKVDAKACRPFDASGLSFKPKSGGLPVFLLVDRGDCYFTTKGWNAQNA
GAAAVLVADDKVEPLITMDSPESSGTEHIENITIPSALVTKRFGDDLRKALQNGEMVNVL
LDWRESLPHPDERVEYEFWTNSNDECGAKCDMQMNFVRSFRGIAQALEKRGYTQFTPHYI
TWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSIGYDGKDVVVQNLIQICVFRVANETR
RPWMWWDYVHDFAVRCPMKEKKYTRECAHGVINSLGLDIEKINKCVGDPDADKENPVLKA
EQDAQIGHGSRGDVTILPTLVVNNRQYRGKLEKRSVLKAVCSGFEETTEPDVCLREDIET
NECLENNGGCWLDKATNVSACKDTFRGRVCECPTVNGVKFIGDGYSHCEASGLGRCQINN
GGCWNETRNGKTVSACSNQEAKGCKCPSGFRGDGMNSCEDVDECKEKLFCQCKDCACENT
WGSYECSCGGSNSLYIREHDTCISKQSSSSLGWGFLWVIFIGLALAGAGAYAVYKYRLRS
YMDSEIRAIMAQYMPLESQEMPNQHRSVVPVDHADI

Transcript Sequence

Transcript ID

EER99915
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:76615451:76620614:-1 gene:SORBI_3002G418300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAAAAGCCTCGCCTCGCCTTTTCTTGTCCTGAAGCCACCCAAGCCGCACGGAAAGGGTG
CCTGCCTGCCCCTCGCTCGGCTCCCAGAACCCATCCCATCTCCGGCCGCCCACTTCTTGG
CAGCTCGATCCGATCATCGGATCGGCCGTCCGGCGGGAACGAACCAACAAAGCTAGGTTC
GGATCGTGTCGATCGTGTGTCCATGGAGACGACGACGGCGGCCAGGCGGCGGCGGCGGCT
GCTGCTGCTCCTGGTCCTGCTGGCGCTCGCGGCGCACCGTGCGGCGGCGCGGTTCGTGGT
GGAGAAGAACAGCCTGCGGGTCACGTCCCCGGCCGCGCTCCGGGGCGTCTACGAGTGCGC
CATCGGCAACTTCGGCATGCCGCAGTACGGCGGCACCATGCACGGCGTCGTCGTCTACCC
CAAGGTCGATGCCAAGGCCTGCAGGCCCTTCGACGCCTCCGGCCTCTCCTTCAAGCCCAA
GTCCGGCGGTCTGCCCGTCTTTCTACTCGTCGATCGCGGAGACTGCTACTTCACAACCAA
GGGATGGAATGCACAAAATGCTGGAGCTGCAGCAGTTCTTGTTGCCGACGACAAAGTCGA
GCCTTTGATCACAATGGATTCTCCAGAATCCAGTGGCACAGAGCACATTGAGAACATCAC
AATTCCTTCGGCACTTGTGACCAAGAGATTTGGAGACGACCTCAGGAAAGCACTGCAAAA
TGGAGAAATGGTGAATGTTCTTCTGGACTGGAGGGAATCTCTGCCCCATCCTGATGAGCG
TGTGGAGTATGAGTTCTGGACAAACAGCAATGATGAATGCGGTGCTAAATGTGACATGCA
AATGAACTTCGTGAGGAGCTTCAGAGGAATAGCTCAGGCCCTTGAGAAAAGGGGTTACAC
CCAGTTCACCCCTCACTATATCACATGGTATTGTCCAGAAGCTTTTATCCTGAGCAAACA
GTGCAAGTCACAATGTATCAATCATGGCAGATATTGCGCACCAGATCCAGAGCAGGATTT
CAGCATTGGATATGACGGCAAAGATGTTGTGGTTCAGAACCTGATTCAAATTTGCGTGTT
CAGAGTTGCCAATGAAACTCGCAGGCCGTGGATGTGGTGGGATTATGTGCACGACTTTGC
TGTTAGGTGCCCAATGAAGGAGAAGAAATACACACGTGAATGTGCACATGGTGTTATCAA
TTCACTTGGATTGGACATTGAGAAAATCAACAAGTGTGTTGGAGATCCTGACGCCGATAA
AGAAAATCCAGTCCTCAAAGCAGAACAGGATGCTCAAATTGGGCATGGTTCTCGCGGCGA
TGTAACTATACTGCCAACTCTTGTCGTCAATAACAGACAATACAGAGGCAAACTGGAAAA
AAGATCTGTGCTGAAAGCAGTATGCTCGGGATTTGAGGAGACAACCGAACCTGATGTCTG
TTTGCGCGAAGATATTGAGACAAATGAATGTTTGGAGAACAATGGAGGTTGCTGGTTAGA
CAAGGCTACCAATGTTTCTGCGTGCAAGGATACCTTCCGTGGTCGTGTTTGTGAATGCCC
TACTGTCAATGGTGTAAAGTTTATAGGTGATGGGTACAGCCACTGTGAAGCTTCTGGTCT
CGGTAGGTGCCAGATCAACAATGGGGGCTGCTGGAACGAGACTAGGAACGGGAAGACTGT
CTCTGCCTGCTCAAATCAAGAAGCTAAAGGCTGCAAATGCCCATCAGGTTTCAGGGGTGA
CGGAATGAACAGTTGCGAAGATGTCGATGAATGCAAAGAGAAGCTTTTCTGCCAGTGCAA
GGATTGCGCTTGTGAGAACACATGGGGAAGCTACGAGTGCAGCTGCGGTGGCAGCAATTC
GCTATACATCAGAGAGCATGATACCTGTATCAGCAAACAGTCTAGTTCGTCCCTGGGCTG
GGGCTTCCTATGGGTGATTTTCATCGGCCTTGCCTTGGCTGGAGCAGGAGCATACGCCGT
GTACAAATACAGGCTACGGAGCTACATGGATTCAGAGATCCGTGCGATCATGGCCCAGTA
CATGCCCCTGGAGAGCCAAGAGATGCCGAACCAACATCGCTCTGTCGTCCCCGTCGACCA
CGCAGACATCTGAAACGGCATGGCTTACATGGATCGAGCATAAAGAGTCAGTATCATTGC
ATATTTGCATTGCATCGGTGGCAGTCCTCTACGTCGACAGAGAAGTCGGCTGCCTCGAGA
GAATTGGATGCTGATACGATTCTGAAGGACAGGAGTATTGGACGGTAGACTGTTTCATCA
CAGCACACCCTGTTTCTTGTTTTGTTTTGTTTTTTTTTTATCTTTTTCCTCCCTGAAAGT
CAGAGCAGATTAGGGTCTCTCACCGCAGTTTAGAGCCGGTTGAGTTCTCTCTTTCTCTAG
TCACTTTTAGAGCCTGCAGTCGTGCCGTGCGTCGCTGCGTAGTAACACAGTAATTAATCG
TTGAGCGTTCTGTAAATATTGTTGTTGAGACTGAACACTGAAGTGCGTTGGTGTTGCTGC
CCTGAATAAAAGGAGCGCAGAAAGAGCATGAGCCTGCTAATATTTTTTTGC