Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99802
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:74824748:74830247:-1 gene:SORBI_3002G396300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCGCCGCCGCTCGCTCCCTCCGCCGCCTCTCCACTTCCTCTTCATCCTCCGTCCGC
GCCCTTCGCCGCGTCCTCCTGCACCATCCACCATCCCCGCCCTCACTTCCGCCTCCTCTC
CCGCCTCTCCGAACCCTTACGCGCGCCTTCCTCCCGCACCTCGCAGCTACCCACGGGCTC
TCCGCTGCTTCCTTCTCTACCTCCGCCCCATCACGCCTAGGAGAACGTGTTGACGTGCGG
GGAGCGCCGGCGATACCCGAGGAGGAGGAGGGGGAGGAGACGGCGGGGGCGTTGGTGCGG
CATGACACGGATGCGTACGCGGCGGTGGAGCTGGCTCTGGACTCAGTGGTGAAGGTGTTC
ACGGTGTCCAGCAGCCCCAACTACTTCTTGCCATGGCAGAATAAGGCGCAGCGGGAGAGC
ATGGGATCCGGGTTTGTAATTCCTGGAAGAAGGATCGTGACGAATGCGCATGTGGTAGCT
GATCATACTTTTGTTCTTGTGAGGAAGCATGGTTCTCCTACTAAATACAGAGCAGAAGTC
CAAGCTGTTGGTCATGAATGTGACTTGGCTCTGTTGACAGTTGAGAGTGAGGAGTTTTGG
GATGGGGTGAACAGTTTGGAGCTTGGTGACATCCCCTTTTTGCAAGAAGCCGTCGCTGTG
GTTGGCTACCCTCAAGGTGGAGATAATATTTCTGTCACCAAGGGGGTTGTATCTAGAGTT
GAACCAACACAATATGCCCATGGTGCTACGCAGCTTATGGCTATACAGATAGACGCAGCC
ATAAATCCAGGTAATAGTGGAGGGCCTGCCATTATGGGTGATAAAGTAGCCGGAGTTGCT
TTCCAGAATTTGTCAGGGGCGGAAAACATTGGTTATATCATACCGGTGCCCGTAATTAAG
CGTTTCATTTCTGGAGTAGAAGAGAGCGGTAGATATTCTGGGTTTTGTACTCTTGGAGTA
TCTTGCCAGGCTACTGAAAATATTCAGTTAAGAGAGTGCTTTGGGATGCGGCCTGAAATG
ACTGGAGTTTTAGTTAGTAGAATAAACCCTCTATCTGATGCTTACAAGATTTTGAAGAAG
GATGACATCCTTCTTGAGTTTGATGGTGTGCCTATCGCAAATGATGGCACAGTTCCATTC
CGGAATAGAGAGAGAATCACCTTTGATCATCTGGTGTCCATGAAAAAACCTGAAGAAACA
GCTGTTCTCAAAGTATTACGAGATGGTAAAGAGCAAGAATTGAGAGTAACACTTAGACCT
CTGCAACCTTTAGTCCCAGTCCATCAATTTGATAAATTACCGAGCTACTACATATTTGCT
GGTTTTGTTTTTATCCCATTTACCCAGCCTTATCTCCATGAATTTGGAGAAGACTGGTAT
AATGCCTCACCACGCCGATTATGTGAACGGGCACTAAGAGAGCTTCCAAAGAAGGCTGGT
GAACAATTAGTTATCCTATCTCAGGTTCTAATGGATGATATCAATGTCGGTTATGAAAGG
CTTGCTGAACTACAGGTAAAGAAGGTAAATGGTGTGGAGGTTGAAAACCTGAAGCACCTG
TGCAGCCTCGTGGAAGGCTGCACCGAAGAAAACTTAAGGTTTGACTTGGACGATGAAAGA
GTCATTGTCCTGAAGTACCAGAACGCAAAGCTTGCCACATCCCGGGTCCTCAAACGGCAC
AGGATACCGTCAGCCATATCGAGTGACCTTGTCGAAGATGAACCAACTAATGGCGAGGTT
GAGACATCATGCACCAGCTAA

Peptide Sequence

PEP ID

EER99802
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:74824748:74830247:-1 gene:SORBI_3002G396300 transcript:EER99802 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLAAARSLRRLSTSSSSSVRALRRVLLHHPPSPPSLPPPLPPLRTLTRAFLPHLAATHGL
SAASFSTSAPSRLGERVDVRGAPAIPEEEEGEETAGALVRHDTDAYAAVELALDSVVKVF
TVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGSPTKYRAEV
QAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSRV
EPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDKVAGVAFQNLSGAENIGYIIPVPVIK
RFISGVEESGRYSGFCTLGVSCQATENIQLRECFGMRPEMTGVLVSRINPLSDAYKILKK
DDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPEETAVLKVLRDGKEQELRVTLRP
LQPLVPVHQFDKLPSYYIFAGFVFIPFTQPYLHEFGEDWYNASPRRLCERALRELPKKAG
EQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVEGCTEENLRFDLDDER
VIVLKYQNAKLATSRVLKRHRIPSAISSDLVEDEPTNGEVETSCTS

Transcript Sequence

Transcript ID

EER99802
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:74824748:74830247:-1 gene:SORBI_3002G396300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTATATTCGCCGGGCTCTTCTCGGCCAACAGCAGTGTCCACGTCACCTCGAATGCTCCT
GTCCGTCCGATCTCCCATCCAGCCATAGTAAAGACTTGAAACCCACAAGCCATAAGCTCC
CAAACCCTCCTGTCAGCTCGGCTCTCCCTCCGGCGAGGCCACCATGCTCGCCGCCGCTCG
CTCCCTCCGCCGCCTCTCCACTTCCTCTTCATCCTCCGTCCGCGCCCTTCGCCGCGTCCT
CCTGCACCATCCACCATCCCCGCCCTCACTTCCGCCTCCTCTCCCGCCTCTCCGAACCCT
TACGCGCGCCTTCCTCCCGCACCTCGCAGCTACCCACGGGCTCTCCGCTGCTTCCTTCTC
TACCTCCGCCCCATCACGCCTAGGAGAACGTGTTGACGTGCGGGGAGCGCCGGCGATACC
CGAGGAGGAGGAGGGGGAGGAGACGGCGGGGGCGTTGGTGCGGCATGACACGGATGCGTA
CGCGGCGGTGGAGCTGGCTCTGGACTCAGTGGTGAAGGTGTTCACGGTGTCCAGCAGCCC
CAACTACTTCTTGCCATGGCAGAATAAGGCGCAGCGGGAGAGCATGGGATCCGGGTTTGT
AATTCCTGGAAGAAGGATCGTGACGAATGCGCATGTGGTAGCTGATCATACTTTTGTTCT
TGTGAGGAAGCATGGTTCTCCTACTAAATACAGAGCAGAAGTCCAAGCTGTTGGTCATGA
ATGTGACTTGGCTCTGTTGACAGTTGAGAGTGAGGAGTTTTGGGATGGGGTGAACAGTTT
GGAGCTTGGTGACATCCCCTTTTTGCAAGAAGCCGTCGCTGTGGTTGGCTACCCTCAAGG
TGGAGATAATATTTCTGTCACCAAGGGGGTTGTATCTAGAGTTGAACCAACACAATATGC
CCATGGTGCTACGCAGCTTATGGCTATACAGATAGACGCAGCCATAAATCCAGGTAATAG
TGGAGGGCCTGCCATTATGGGTGATAAAGTAGCCGGAGTTGCTTTCCAGAATTTGTCAGG
GGCGGAAAACATTGGTTATATCATACCGGTGCCCGTAATTAAGCGTTTCATTTCTGGAGT
AGAAGAGAGCGGTAGATATTCTGGGTTTTGTACTCTTGGAGTATCTTGCCAGGCTACTGA
AAATATTCAGTTAAGAGAGTGCTTTGGGATGCGGCCTGAAATGACTGGAGTTTTAGTTAG
TAGAATAAACCCTCTATCTGATGCTTACAAGATTTTGAAGAAGGATGACATCCTTCTTGA
GTTTGATGGTGTGCCTATCGCAAATGATGGCACAGTTCCATTCCGGAATAGAGAGAGAAT
CACCTTTGATCATCTGGTGTCCATGAAAAAACCTGAAGAAACAGCTGTTCTCAAAGTATT
ACGAGATGGTAAAGAGCAAGAATTGAGAGTAACACTTAGACCTCTGCAACCTTTAGTCCC
AGTCCATCAATTTGATAAATTACCGAGCTACTACATATTTGCTGGTTTTGTTTTTATCCC
ATTTACCCAGCCTTATCTCCATGAATTTGGAGAAGACTGGTATAATGCCTCACCACGCCG
ATTATGTGAACGGGCACTAAGAGAGCTTCCAAAGAAGGCTGGTGAACAATTAGTTATCCT
ATCTCAGGTTCTAATGGATGATATCAATGTCGGTTATGAAAGGCTTGCTGAACTACAGGT
AAAGAAGGTAAATGGTGTGGAGGTTGAAAACCTGAAGCACCTGTGCAGCCTCGTGGAAGG
CTGCACCGAAGAAAACTTAAGGTTTGACTTGGACGATGAAAGAGTCATTGTCCTGAAGTA
CCAGAACGCAAAGCTTGCCACATCCCGGGTCCTCAAACGGCACAGGATACCGTCAGCCAT
ATCGAGTGACCTTGTCGAAGATGAACCAACTAATGGCGAGGTTGAGACATCATGCACCAG
CTAATGCGGGCCTCTTTTTAGACCTAGTTAGGGAGTTCCCCGATGAAGCACGGTTCAAGG
AGCGAGCTGCATTGTTGGCGTGGCAAGCGCATCCACCTGAAGTACATGGCTTCACTTGCT
CCCTTTTGGGCGGCTTCAGTTTTTTGACGTAAGGAGTAAGATTATGAGCTCCGGAGCTTT
TCGGCCTGAATGTAACAGTAACGTAATCATTCTTTTTTATTTTTACTAAACATTCATTTT
TGCCATCGTTGGCATGGCGCACCCACATGGTCTGTATCATCAGGAAACATATGTACAGCA
CAGGAAAAAATAATGTTTGAAAAGGAAAAGAGTT