Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99786
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:74538356:74542873:-1 gene:SORBI_3002G392700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGGGCGAGGCTCTCTGCCGGAGGGCTCGCTCTTTCTTGGATTGGACAGCTCCACT
CAATCGCTGAAAGCTACGGTGCTCAACAATGAGTTAACAATAGTAGCTTCTGAAATTGTT
AATTTTGACTCTGAATTGCCGCACTACAAAACTGAAGGTGGGGTGTACAGAGACCCCGCA
GATGATGGCCACATTTTTTCACCAACCATTATGTGGGTGGAAGCTCTGGAGCTGCTGCTT
GAGAAGCTAAAACCAAAGATCAACTTCGGTAAGGTAGTGGCTGTCTCAGGGAGTGGGCAG
CAACATGGCAGCGTTTATTGGAAGAAGGGCAGCCATGCTGTGTTGTCCTCCTTGGATGCT
AGTAAGAGCCTGTTATCGCAGCTCAAGGATGCATTTTCTACGATGAACTCACCGATATGG
ATGGATAGTAGCACAACTAAGCAATGCAGAGAAATAGAGAATGCAGTTGGAGGTGCACTG
GAGTTAGCAAAACTGACAGGATCTCGTGCCTATGAAAGATTCACTGGTCCTCAGATAAGG
AAGATCTATCAGACAGAACCTGATGTTTATGAAGATACTGAGAGAATATCTTTGGTGAGC
TCGTTCATGGCATCTATCCTTGTTGGAAGCTATGCAAGTATTGATGAAACTGATGGTGCG
GGGATGAACTTGATGGATATAAACCAAAGGATCTGGTCAAAATCTGTTCTAGAGGCAACT
GCTCCTGGACTTGAAGCAAAGCTTGGAAATCTAGCACCAGCGTATTCAGCTGCTGGCCGA
ATCGCTCCTTATTTTGTAGAAAGGTTTCAGTTTGATAAGAACTGTTTGGTCATTCAGTGG
TCTGGAGACAATCCTAATAGCCTTGCAGGTTTAACTTTGAATACTCCTGGTGATCTTGCC
ATTAGCCTTGGTACTAGCGATACAGTATTCGGGATAACTGCAGAAGCTAAACCAAGCATT
GAAGGGCATGTTTTCCCCAATCCTGTTGAACCCGATGGTTATATGGTGATGCTATGCTAC
AAAAATGGCTCTTTGACCAGAGAAGATGTGCGAAATCGGTGTGCAGACAAATCATGGGAT
GTTTTTAACAATTATCTGGAGAAAACACCCCCTCTAAATGGTGGAAAGTTAGGATTCTAC
TACAAAGACCATGAAATCCTTCCACCACTTCCAGTGGGTTTCCATCGGTACGCTGTCGAA
AACCTCAATGACGTTACATCAGACACTCTGTTGGAGCGTGAAGTGGAAGAATTTGACCCA
CCGTCTGAGGTTCGTGCCATCATTGAGGGTCAAATGCTGTCAATGCGAGGCCACGCCGAG
AGGTTTGGCATGCCGAACCCTCCCAAGCGGATCATAGCAACCGGTGGGGCATCCTCCAAC
GAAAGCATCCTCAAGTCAATCGCCCAGATCTTCGGCTGCCCTGTCTTTACAGTCCAGAGA
CCTGATTCGGCTTCGCTGGGGGCGGCGCTGAGAGCTGCCCACGGGTGGCTGTGCAACGCC
CAAGGCAGCTTCGTCCCCATCTCATGCCTGTACCAGGGCAACCTGGAGAAAACCTCTCTT
GGCTCGAAGCTGGCGGTGCCGGCCGGCGACAAGGAGGAGGACCGGGAGCTCCTCCAGAAG
TACACCCTCCTGATGAGGAAGAGGATGGAGATCGAGAGACGCCTGGTGGAGAAGATCGGG
CGATCATAG

Peptide Sequence

PEP ID

EER99786
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:74538356:74542873:-1 gene:SORBI_3002G392700 transcript:EER99786 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSGRGSLPEGSLFLGLDSSTQSLKATVLNNELTIVASEIVNFDSELPHYKTEGGVYRDPA
DDGHIFSPTIMWVEALELLLEKLKPKINFGKVVAVSGSGQQHGSVYWKKGSHAVLSSLDA
SKSLLSQLKDAFSTMNSPIWMDSSTTKQCREIENAVGGALELAKLTGSRAYERFTGPQIR
KIYQTEPDVYEDTERISLVSSFMASILVGSYASIDETDGAGMNLMDINQRIWSKSVLEAT
APGLEAKLGNLAPAYSAAGRIAPYFVERFQFDKNCLVIQWSGDNPNSLAGLTLNTPGDLA
ISLGTSDTVFGITAEAKPSIEGHVFPNPVEPDGYMVMLCYKNGSLTREDVRNRCADKSWD
VFNNYLEKTPPLNGGKLGFYYKDHEILPPLPVGFHRYAVENLNDVTSDTLLEREVEEFDP
PSEVRAIIEGQMLSMRGHAERFGMPNPPKRIIATGGASSNESILKSIAQIFGCPVFTVQR
PDSASLGAALRAAHGWLCNAQGSFVPISCLYQGNLEKTSLGSKLAVPAGDKEEDRELLQK
YTLLMRKRMEIERRLVEKIGRS

Transcript Sequence

Transcript ID

EER99786
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:74538356:74542873:-1 gene:SORBI_3002G392700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGAGAGAGAGAGAGAGAGGGAGAGAACAGTACGGAAGATAAGATATGGGAACAGCAATC
GGTAGGAAGTAGGATTGACTCCCCTCCAACTGTCTTCACATACAAAGCGCAACCGATAAT
GATCCTCGTCTAGCACTCCAGTACCAGCAATCGGTAACAAACATCCTTATCCGACGGAAG
CCAACAACGGATTTGACGGTCCCCAGTCCACTCCTCGTCTTTGCCGATCGCCGCTCGCTT
TCCATATATCTCTCCCAGCTCCGTTTGATCCGTAGCGCACTCGTCCGTCGTCGTCGCTCC
CACTCCGCGTCGCCCCACTCTCCCTCTCCTCGTCGAACTCGCCTGGCTCCTAGTCCCGTC
CCACTTGGAGCGAATTTTGCCCGGGGTGAGAGAGGCGGCGGCCATGTCGGGGCGAGGCTC
TCTGCCGGAGGGCTCGCTCTTTCTTGGATTGGACAGCTCCACTCAATCGCTGAAAGCTAC
GGTGCTCAACAATGAGTTAACAATAGTAGCTTCTGAAATTGTTAATTTTGACTCTGAATT
GCCGCACTACAAAACTGAAGGTGGGGTGTACAGAGACCCCGCAGATGATGGCCACATTTT
TTCACCAACCATTATGTGGGTGGAAGCTCTGGAGCTGCTGCTTGAGAAGCTAAAACCAAA
GATCAACTTCGGTAAGGTAGTGGCTGTCTCAGGGAGTGGGCAGCAACATGGCAGCGTTTA
TTGGAAGAAGGGCAGCCATGCTGTGTTGTCCTCCTTGGATGCTAGTAAGAGCCTGTTATC
GCAGCTCAAGGATGCATTTTCTACGATGAACTCACCGATATGGATGGATAGTAGCACAAC
TAAGCAATGCAGAGAAATAGAGAATGCAGTTGGAGGTGCACTGGAGTTAGCAAAACTGAC
AGGATCTCGTGCCTATGAAAGATTCACTGGTCCTCAGATAAGGAAGATCTATCAGACAGA
ACCTGATGTTTATGAAGATACTGAGAGAATATCTTTGGTGAGCTCGTTCATGGCATCTAT
CCTTGTTGGAAGCTATGCAAGTATTGATGAAACTGATGGTGCGGGGATGAACTTGATGGA
TATAAACCAAAGGATCTGGTCAAAATCTGTTCTAGAGGCAACTGCTCCTGGACTTGAAGC
AAAGCTTGGAAATCTAGCACCAGCGTATTCAGCTGCTGGCCGAATCGCTCCTTATTTTGT
AGAAAGGTTTCAGTTTGATAAGAACTGTTTGGTCATTCAGTGGTCTGGAGACAATCCTAA
TAGCCTTGCAGGTTTAACTTTGAATACTCCTGGTGATCTTGCCATTAGCCTTGGTACTAG
CGATACAGTATTCGGGATAACTGCAGAAGCTAAACCAAGCATTGAAGGGCATGTTTTCCC
CAATCCTGTTGAACCCGATGGTTATATGGTGATGCTATGCTACAAAAATGGCTCTTTGAC
CAGAGAAGATGTGCGAAATCGGTGTGCAGACAAATCATGGGATGTTTTTAACAATTATCT
GGAGAAAACACCCCCTCTAAATGGTGGAAAGTTAGGATTCTACTACAAAGACCATGAAAT
CCTTCCACCACTTCCAGTGGGTTTCCATCGGTACGCTGTCGAAAACCTCAATGACGTTAC
ATCAGACACTCTGTTGGAGCGTGAAGTGGAAGAATTTGACCCACCGTCTGAGGTTCGTGC
CATCATTGAGGGTCAAATGCTGTCAATGCGAGGCCACGCCGAGAGGTTTGGCATGCCGAA
CCCTCCCAAGCGGATCATAGCAACCGGTGGGGCATCCTCCAACGAAAGCATCCTCAAGTC
AATCGCCCAGATCTTCGGCTGCCCTGTCTTTACAGTCCAGAGACCTGATTCGGCTTCGCT
GGGGGCGGCGCTGAGAGCTGCCCACGGGTGGCTGTGCAACGCCCAAGGCAGCTTCGTCCC
CATCTCATGCCTGTACCAGGGCAACCTGGAGAAAACCTCTCTTGGCTCGAAGCTGGCGGT
GCCGGCCGGCGACAAGGAGGAGGACCGGGAGCTCCTCCAGAAGTACACCCTCCTGATGAG
GAAGAGGATGGAGATCGAGAGACGCCTGGTGGAGAAGATCGGGCGATCATAGGAAAATCA
CGAATTTAGCACTTTTGAAGCTGCCAGGACCGAATAATTTGTGAATAACTGTTGATTATC
ATCCTTTATACGCAAGCTCTCTTAGGTGAGAGTCAGTATTGGTTCTGATTTTATAAGCCT
GGCTCTGTGGCTCAGCTGAGAAAAATTTGTGCTGGGACTCTGGACATCGTTGTGAGACAC
GCACAAAACCTTTGAAAGAGACAGCACTTCGCAAGGGTAAACGAATCTTAAAAATCTTTG
TTATGACATTGGCACATTGTGAGTTTGTCGA