Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99720
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:73572791:73577695:-1 gene:SORBI_3002G379600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTGGCCACCAACTCCGCCGCCGCCGCCGCAGCAGCAGCGGCCGTATCCGGTGGC
GCGTCATCCCAGCCGCGCCGCGCGGCCGTGTTCCTCCCGCTGAAGAGGCGCACCATCTCC
GCCATCCACGCCGCCGACCCGTCAAAGAACAACGGACCCGCCGTCCCCGCGGCGGCCGCT
GCCAAGTCTTCCGCCTCGGCGGTGGCCACGCCGGAGAAGAAGCCGGCGGCTCCGGGGAAG
TGGGCGGTCGACAGCTGGAAATCGAAGAAGGCGCTGCAGCTCCCCGAATACCCGAACCAG
GAGGAGCTGGACACGGTGCTCAAGACCATCGAAACGTTCCCGCCGGTCGTGTTCGCCGGA
GAGGCGCGCCACCTCGAGGAGCGCATGGCAGAGGCTGCCATGGGCCGCGCCTTCGTCCTC
CAGGGCGGCGACTGCGCCGAGAGCTTCAAGGAGTTCCACGCCAACAATATCCGTGACACC
TTCCGTATTCTGCTCCAGATGGGCGCCGTGCTCATGTTCGGTGGTCAGGTGCCGGTCGTC
AAGGTGGGGAGGATGGCTGGCCAGTTCGCCAAGCCAAGGTCCGAACCGTTCGAGGAGAGG
GATGGTGTTAAGCTGCCGAGCTACAGGGGTGACAACGTCAACGGCGATGACTTCACCGAG
AAGAGCCGCGTGCCAGACCCGCAGAGGATGATCCGCGCCTACGCGCAGTCGGTGGCGACG
CTCAACCTGCTCCGCGCGTTCGCCACAGGAGGGTATGCTGCCATGCAGCGTGTCACACAA
TGGAACCTCGACTTCATGGATCACAGCGAGCAAGGTGATAGGTACCGTGAATTGGCCCAT
AGGGTGGATGAGGCTCTTGGGTTCATGACTGCAGCAGGACTTACCGTTGACCACCCGATA
ATGACGACTACTGACTTCTGGACCTCGCACGAGTGCCTTCTCTTACCCTATGAGCAGGCT
CTTACCCGTGAGGACTCCACCAGTGGCCTTTTCTATGATTGTTCAGCCCACATGTTGTGG
GTTGGTGAGCGCACTCGTCAACTTGATGGAGCTCATGTTGAATTCCTCCGTGGTGTGGCC
AACCCTCTTGGCATAAAGGTGAGTGACAAAATGAATCCCAGTGACTTGGTGAAGCTGATT
GAGATTCTGAACCCTTCAAACAAACCCGGAAGGATCACCATAATTACAAGGATGGGGGCA
GAGAACATGAGAGTAAAGTTGCCTCATCTCATCCGTGCTGTCCGCAATGCTGGATTGATT
GTCACATGGATTACTGATCCTATGCATGGAAACACCATAAAGGCCCCTTGTGGCTTGAAG
ACTCGTCCTTTCGATTCCATTCTGGCTGAAGTGCGCGCATTCTTCGACGTGCATGACCAA
GAAGGAAGTCACCCAGGAGGTATCCACCTTGAAATGACTGGGCAGAACGTGACCGAGTGC
ATTGGTGGATCACGGACTGTGACCTTTGACGACCTGAGCGACCGCTACCACACCCACTGT
GACCCAAGACTGAACGCCTCCCAGTCCCTGGAGCTTGCCTTCATCATTGCAGAGAGGCTC
AGGAAGAGGAGGATGCGGTCAGGGCTCAACAACAGCCTGCCGCTGCCACCACTGGCTTTC
TGA

Peptide Sequence

PEP ID

EER99720
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:73572791:73577695:-1 gene:SORBI_3002G379600 transcript:EER99720 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALATNSAAAAAAAAAVSGGASSQPRRAAVFLPLKRRTISAIHAADPSKNNGPAVPAAAA
AKSSASAVATPEKKPAAPGKWAVDSWKSKKALQLPEYPNQEELDTVLKTIETFPPVVFAG
EARHLEERMAEAAMGRAFVLQGGDCAESFKEFHANNIRDTFRILLQMGAVLMFGGQVPVV
KVGRMAGQFAKPRSEPFEERDGVKLPSYRGDNVNGDDFTEKSRVPDPQRMIRAYAQSVAT
LNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRYRELAHRVDEALGFMTAAGLTVDHPI
MTTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVA
NPLGIKVSDKMNPSDLVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRNAGLI
VTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC
IGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRKRRMRSGLNNSLPLPPLAF

Transcript Sequence

Transcript ID

EER99720
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:73572791:73577695:-1 gene:SORBI_3002G379600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACAATCCCCAAACTACCCTTCCCCCTCCGTTCCATTTCCACCACCTCCTATCGTCGCCA
CCCGGCGGCAACTACCCCACCCCTCCGTCGTCGCCGCTCACGGCTACCAACCCCTCCTCC
TCCCGCCCGTCAATAAGTACCGCCCCGCTCGCCACCTCCATTTCCTCAGAGGAGACGCCC
TGCACTGCACGACTCCTCCCCATCTACCACTACCAACCCATCTATCTACCACCCCTCGCT
CGCAATGGCGCTGGCCACCAACTCCGCCGCCGCCGCCGCAGCAGCAGCGGCCGTATCCGG
TGGCGCGTCATCCCAGCCGCGCCGCGCGGCCGTGTTCCTCCCGCTGAAGAGGCGCACCAT
CTCCGCCATCCACGCCGCCGACCCGTCAAAGAACAACGGACCCGCCGTCCCCGCGGCGGC
CGCTGCCAAGTCTTCCGCCTCGGCGGTGGCCACGCCGGAGAAGAAGCCGGCGGCTCCGGG
GAAGTGGGCGGTCGACAGCTGGAAATCGAAGAAGGCGCTGCAGCTCCCCGAATACCCGAA
CCAGGAGGAGCTGGACACGGTGCTCAAGACCATCGAAACGTTCCCGCCGGTCGTGTTCGC
CGGAGAGGCGCGCCACCTCGAGGAGCGCATGGCAGAGGCTGCCATGGGCCGCGCCTTCGT
CCTCCAGGGCGGCGACTGCGCCGAGAGCTTCAAGGAGTTCCACGCCAACAATATCCGTGA
CACCTTCCGTATTCTGCTCCAGATGGGCGCCGTGCTCATGTTCGGTGGTCAGGTGCCGGT
CGTCAAGGTGGGGAGGATGGCTGGCCAGTTCGCCAAGCCAAGGTCCGAACCGTTCGAGGA
GAGGGATGGTGTTAAGCTGCCGAGCTACAGGGGTGACAACGTCAACGGCGATGACTTCAC
CGAGAAGAGCCGCGTGCCAGACCCGCAGAGGATGATCCGCGCCTACGCGCAGTCGGTGGC
GACGCTCAACCTGCTCCGCGCGTTCGCCACAGGAGGGTATGCTGCCATGCAGCGTGTCAC
ACAATGGAACCTCGACTTCATGGATCACAGCGAGCAAGGTGATAGGTACCGTGAATTGGC
CCATAGGGTGGATGAGGCTCTTGGGTTCATGACTGCAGCAGGACTTACCGTTGACCACCC
GATAATGACGACTACTGACTTCTGGACCTCGCACGAGTGCCTTCTCTTACCCTATGAGCA
GGCTCTTACCCGTGAGGACTCCACCAGTGGCCTTTTCTATGATTGTTCAGCCCACATGTT
GTGGGTTGGTGAGCGCACTCGTCAACTTGATGGAGCTCATGTTGAATTCCTCCGTGGTGT
GGCCAACCCTCTTGGCATAAAGGTGAGTGACAAAATGAATCCCAGTGACTTGGTGAAGCT
GATTGAGATTCTGAACCCTTCAAACAAACCCGGAAGGATCACCATAATTACAAGGATGGG
GGCAGAGAACATGAGAGTAAAGTTGCCTCATCTCATCCGTGCTGTCCGCAATGCTGGATT
GATTGTCACATGGATTACTGATCCTATGCATGGAAACACCATAAAGGCCCCTTGTGGCTT
GAAGACTCGTCCTTTCGATTCCATTCTGGCTGAAGTGCGCGCATTCTTCGACGTGCATGA
CCAAGAAGGAAGTCACCCAGGAGGTATCCACCTTGAAATGACTGGGCAGAACGTGACCGA
GTGCATTGGTGGATCACGGACTGTGACCTTTGACGACCTGAGCGACCGCTACCACACCCA
CTGTGACCCAAGACTGAACGCCTCCCAGTCCCTGGAGCTTGCCTTCATCATTGCAGAGAG
GCTCAGGAAGAGGAGGATGCGGTCAGGGCTCAACAACAGCCTGCCGCTGCCACCACTGGC
TTTCTGAATGGCCAAAGCCGAACAGAGAGGGTAGAAATAGTTGCAGTGAGTCGAAAGAGG
TGATCGGCGCCTATTTATTTGTTGATGTTCGGTGTGGTGGCCTGGTGGGTGCTCTTGGCA
CAAGTTACATGCTGGGGAGCTATAGGAGGTACTTGTTGTATCCTGGAAGACAGTAGCTAG
CATTATGTGTTGTAATTGTATGCTTTCGTTTCCTGTTTTGGGTGCGTGACTTGCCGACTT
AGCTGCTTCTGGTGTTTTGACCTTGGTAAGGAGAGAATAAAGAGATAATGGGAGTGCAAT
GTTTGCTGAACTGGTGCTCAATAAATTGATCGATCCCCTTGATGGTTCTATTTTGTTCTC
TTCTGCAGTGATGTGAAATGCTTGTTCGT