Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99708
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:73319303:73324333:-1 gene:SORBI_3002G375800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGCCGCTTCGCAGCCGACAGGGCGCGCCGTGCGGTGGCCACGTCCCTGCGCGGCGCG
GCGTCCAGATCAGCAGCGCCGTCGCCTCACGCTCCGGCGCCGCGTCATCCAGCCGCCCCG
GTGGGGGCGGCGGCGATGGCGGCCGCCATGGCGAGGGCCATGTCCACGGCGGCCGTCGGC
GCGCCGCCAGTGTCACTCAACACCATCAACCCCAAGGTCTTGAAGTGTGAATATGCAGTT
CGGGGAGAGATTGTTACACATGCTCAGAACTTACAACAAGAATTGCAGAAAAATCCAGAA
TCACTTCCTTTCGACGAGATACTCTACTGTAATATTGGAAATCCCCAATCACTTGGACAA
CAACCAGTTACCTATTTCAGAGAAGTTCTCTCTTTATGTGATCATCCAGCTCTGCTGGAT
AAAAGCGAAACTCATGCTTTGTACAGTTCAGATGCTATAGAGAGAGCATGGCAAATTCTA
GAGAAGATACCAGGTAGAGCGACAGGAGCATATAGCCATAGTCAGGGTGTAAAAGGTTTA
CGTGATGAAATTGCTGCTGGAATTGCTGCACGTGATGGGTTTCACGCAAGCGGAGATAAC
ATCTTCCTAACAGATGGAGCAAGCCCAGCAGTGCACATGATGATGCAGTTGCTGATAAGT
TCTGAGAAGGATGGCATTCTCTGCCCTATTCCACAGTACCCACTGTACTCTGCATCGATT
GCTCTTCACGGTGGTTCCCTTGTTCCTTATTACCTTGATGAAGAGACAGGGTGGGGACTC
GAGGTTGATGAACTGAAGAAACAACTGGAGGAGGCTCGATCTAAGGGCATCACTGTGAGG
GCGCTTGTTGTCATAAATCCAGGGAATCCAACAGGACAGGTTCTTGCTGAGGAAAACCAA
AAGAAAATTGTCGAATTCTGCAAGAATGAAGGACTTGTTCTTCTTGCGGATGAGGTTTAC
CAAGAAAATGTATATGTTGAAGATAAGAAATTCCACTCATTCAAAAAAATTGCACGGTCA
CTGGGATACACTGATGATGATCTTCCTTTGGTATCATTCCAGTCGGTTTCTAAAGGCTTC
TACGGAGAATGTGGAAAACGAGGTGGTTATATGGAGATAACTGGATTCAGTCCTGAAGTA
CGGGAACAAATTTACAAGGTGGCATCAGTAAATCTATGCTCCAATGTTTCAGGGCAAATT
CTTGCTAGCCTTGTAATGAACCCACCAAAGGCTGGGGATGAATCCTTTGAATCCTTCATG
TTAGAGAGGGATGGTATCCTTTCATCATTGGCTCGGCGTGCAAAGGCTTTGGAAGAAGCA
TTCAATAGTTTAGAAGGTATTACATGCAATAAAGCCGAAGGTGCAATGTATCTGTTCCCA
CGCCTTCATTTACCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGCACTGCCCCAGAT
GCATACTATGCTAAACGCCTACTAGAAGCCACTGGGATTGTTGTTGTCCCTGGCTCTGGT
TTTGGACAGGTCCCTGGAACATGGCACTTCAGATGCACGATACTGCCGCAGGAGGACAAA
ATACCAGCAATAATATCTAGGTTCAAGGAGTTTCACGAGAAGTTCATGGATGAATTCCGT
GATTGA

Peptide Sequence

PEP ID

EER99708
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:73319303:73324333:-1 gene:SORBI_3002G375800 transcript:EER99708 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRRFAADRARRAVATSLRGAASRSAAPSPHAPAPRHPAAPVGAAAMAAAMARAMSTAAVG
APPVSLNTINPKVLKCEYAVRGEIVTHAQNLQQELQKNPESLPFDEILYCNIGNPQSLGQ
QPVTYFREVLSLCDHPALLDKSETHALYSSDAIERAWQILEKIPGRATGAYSHSQGVKGL
RDEIAAGIAARDGFHASGDNIFLTDGASPAVHMMMQLLISSEKDGILCPIPQYPLYSASI
ALHGGSLVPYYLDEETGWGLEVDELKKQLEEARSKGITVRALVVINPGNPTGQVLAEENQ
KKIVEFCKNEGLVLLADEVYQENVYVEDKKFHSFKKIARSLGYTDDDLPLVSFQSVSKGF
YGECGKRGGYMEITGFSPEVREQIYKVASVNLCSNVSGQILASLVMNPPKAGDESFESFM
LERDGILSSLARRAKALEEAFNSLEGITCNKAEGAMYLFPRLHLPQKAIGAAQAAGTAPD
AYYAKRLLEATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIISRFKEFHEKFMDEFR
D

Transcript Sequence

Transcript ID

EER99708
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:73319303:73324333:-1 gene:SORBI_3002G375800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAAAATTCAACCGGGAACGCCTCGTTTCTTTCTTGCCGAGAACGCAAAACCCGCTAGAAC
AAATAGGGAAAAAGGAAGCCGCGGTGAGATAGAAAATTCACACTTGGCCTTCCTCCCTAA
TCCCACTTATCAGCATCACGCCATCGCGCCCCCGCCTGAGCGCCGTCTTCGGTCGCCATC
CCTGCATCGCCGCTGCCGCCATGCGCCGCTTCGCAGCCGACAGGGCGCGCCGTGCGGTGG
CCACGTCCCTGCGCGGCGCGGCGTCCAGATCAGCAGCGCCGTCGCCTCACGCTCCGGCGC
CGCGTCATCCAGCCGCCCCGGTGGGGGCGGCGGCGATGGCGGCCGCCATGGCGAGGGCCA
TGTCCACGGCGGCCGTCGGCGCGCCGCCAGTGTCACTCAACACCATCAACCCCAAGGTCT
TGAAGTGTGAATATGCAGTTCGGGGAGAGATTGTTACACATGCTCAGAACTTACAACAAG
AATTGCAGAAAAATCCAGAATCACTTCCTTTCGACGAGATACTCTACTGTAATATTGGAA
ATCCCCAATCACTTGGACAACAACCAGTTACCTATTTCAGAGAAGTTCTCTCTTTATGTG
ATCATCCAGCTCTGCTGGATAAAAGCGAAACTCATGCTTTGTACAGTTCAGATGCTATAG
AGAGAGCATGGCAAATTCTAGAGAAGATACCAGGTAGAGCGACAGGAGCATATAGCCATA
GTCAGGGTGTAAAAGGTTTACGTGATGAAATTGCTGCTGGAATTGCTGCACGTGATGGGT
TTCACGCAAGCGGAGATAACATCTTCCTAACAGATGGAGCAAGCCCAGCAGTGCACATGA
TGATGCAGTTGCTGATAAGTTCTGAGAAGGATGGCATTCTCTGCCCTATTCCACAGTACC
CACTGTACTCTGCATCGATTGCTCTTCACGGTGGTTCCCTTGTTCCTTATTACCTTGATG
AAGAGACAGGGTGGGGACTCGAGGTTGATGAACTGAAGAAACAACTGGAGGAGGCTCGAT
CTAAGGGCATCACTGTGAGGGCGCTTGTTGTCATAAATCCAGGGAATCCAACAGGACAGG
TTCTTGCTGAGGAAAACCAAAAGAAAATTGTCGAATTCTGCAAGAATGAAGGACTTGTTC
TTCTTGCGGATGAGGTTTACCAAGAAAATGTATATGTTGAAGATAAGAAATTCCACTCAT
TCAAAAAAATTGCACGGTCACTGGGATACACTGATGATGATCTTCCTTTGGTATCATTCC
AGTCGGTTTCTAAAGGCTTCTACGGAGAATGTGGAAAACGAGGTGGTTATATGGAGATAA
CTGGATTCAGTCCTGAAGTACGGGAACAAATTTACAAGGTGGCATCAGTAAATCTATGCT
CCAATGTTTCAGGGCAAATTCTTGCTAGCCTTGTAATGAACCCACCAAAGGCTGGGGATG
AATCCTTTGAATCCTTCATGTTAGAGAGGGATGGTATCCTTTCATCATTGGCTCGGCGTG
CAAAGGCTTTGGAAGAAGCATTCAATAGTTTAGAAGGTATTACATGCAATAAAGCCGAAG
GTGCAATGTATCTGTTCCCACGCCTTCATTTACCCCAGAAGGCAATTGGAGCTGCCCAAG
CAGCTGGCACTGCCCCAGATGCATACTATGCTAAACGCCTACTAGAAGCCACTGGGATTG
TTGTTGTCCCTGGCTCTGGTTTTGGACAGGTCCCTGGAACATGGCACTTCAGATGCACGA
TACTGCCGCAGGAGGACAAAATACCAGCAATAATATCTAGGTTCAAGGAGTTTCACGAGA
AGTTCATGGATGAATTCCGTGATTGAGTATCCATCACCTGCGTCCATCTCACTCTTGGCA
TACCATCAGTTTCCTGCCAGAAGGCATCCTGTAATTTTTCTGTTGAAATAATAAGGTTGT
CAATTGGTGTCCCCCACTCATCGTCCTATGGATGCTACAACCAAACACCATCCTAACTTC
TGTTACAGGCAGATCCTATGAAACCTTACAGAATCTCGGGCACTGCATATCATGCTTCTG
TTTGCCTTGTGAGAAGTATATTTAGGCTGCTAGGTTCTGAGCCCTGATGTGTACAAACAT
ACCCGAATTTTGAGAAGTTGAAATGTCTCGGCGCATCCTGAAATTCTGCCTTGTGTCGAG
GCGGAGAATCTTTACTGTCCAGGTGATCTGTTTGGTGACTGGCTGTCTGTTCTGCTTCTG
CCCATTTGACATTGCTACAGGTATAGACACCATTAGGAGCGTCAGCCTGTAAGGTTCGAA
CTTGCATCTACTCCTACTGTTCTCCCAGATATGACTATTGCATGGAGTGGAGATTTTGTT
AGA