Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99489
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:69777273:69781238:-1 gene:SORBI_3002G328300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTCACTCGCCTCCTCGTTCTCCTCCTCGGCGCCGCCGCATTGCCTGTGCTCTTG
TTCCGCACTGCAGAGGCGCGCGAGGTGGGCGTGAACTACGGCAGGGTGGCGAACGACCTG
CCGGACCCGGCGGCGGTGGTGCAGCTGCTCAGGGACAACGGCATCACCATGGTGCGGATC
TACGACACCGACGACGCGGTGCTGAGGTCGTTCGCCAACACCGGCATCAAGCTCATGGTG
ATGCTGCCCAACGAGAACCTGGCCGACGCCGCGCGGAGCCCGTCGTACGCGGCCGACTGG
GCGCGGCGCCGCGTGGCTGCCTACCTCCCGGCCACGCGGATCCACGCCGTCTCCGTGGGC
AACGAGGTGTTCGACTCGAGGCCGGACCTGACGCCGCTGCTCGTCCCCGCCATGACCAAC
GTGCACGCCGCGCTGGCGCAGCTGGGCCTCGCCGACGCCATCAAGGTGTCCACGCCGCTG
TCCTTCGCCGCGGTGGCCGTGTCGTGGCCGCCGTCCGCGGGCAGGTTCCGGGACGACATC
GCGCAGCCGGTGATGAGGCCCATGCTCGAGTTCCTGCAGCGGACCGGCTCCTACCTCACC
ATCAACCTCTACCCTTACTTCGCCTACGCCGCTCAGCCGGACAAGATCTCCCGCGACTAC
TTCCTCGGGAACCCCAACCCCGGCGTGCGCGACCCGGACACCGGCCTCATGTATTACAGC
GTCCTGGACGCGCAGCGCGACGCCACGTTCTCTGCCATGGATAAGCTTGGGTTCACCAGT
CTTCAAGCAATTCCAGGGGAGACCGGGTCAGCGTCTGCCGGCCGACCGAAACCTGGTCCT
CGACACAACAAACCACTACACCAGCCTTCTTGGGAGCTGGCCGTCGGGGACGACGGGGAT
GGAGTTAGAGTAGACCCGCCGGCGGCCTCAAAGGCCAACGCGCAGGCGTACAACAACAAC
GTCATCAACCGCGTGCTGGCCGGCAGGACGGGCACCCCGCTCCGCCCCGACGCCGACATG
GACGTGTACATCTTCGCCCTGTTCAACGAGAACCAGAAGGGTTCCGGGCCGGACGACATC
GAGGCCAACTTCGGCCTCTTCTACCCCAACATGGAGAAGGTGTACGAGTTCGACTTCCGC
GGCGGCGGCGTTCCGCCGGCGCCGGGGGCGGAGAGCTGGTGCGTGGCGAACGCGTCGGTC
GGGGAGTCGTGGCTGCAGGCGGCACTGGAGTACGCGTGCGGCCACGGCGCCGACTGCAGC
GCCATCCAGCCCGGCGCGACGTGCTTCGAGCCGGACACCGTGGTCGCGCACGCCTCGTAC
GCGTTCAACAGCTACTACCAGCGGAACGGCCGGAGCAACGGGACGTGCGACTTCAACGGC
GCCGGTTACATCGTCTACCAAGAACCAGCTGGCACCTGCGACCCGAACGCGAGCTGGTGC
GTGGCGAACGCGGCGGTCGGGGACGCGCGGCTGCTGGATGGGTTGAACTATGCGTGTGCC
AACGGCGCGGACTGCAGCACCATCCAGCCGGGCGCGCCGTGCTTCGAGCCCAACACCATG
GTCGCGCACGCCTCACACGCGTTCAACAGCTACTACCAGCGCAACCGTCGGGCAAGCGGG
ACGTGCGACTTCGCCGGCGCCGCCTCCGTCGTCTACCGGGCACCAAAGTACGGAAACTGC
GTGCTCCCATCAAAGGCTTCGATTGAAGAAACGATAGCAAAGTCGGAAGGCGAAGCTGCC
ATTTGA

Peptide Sequence

PEP ID

EER99489
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:69777273:69781238:-1 gene:SORBI_3002G328300 transcript:EER99489 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALTRLLVLLLGAAALPVLLFRTAEAREVGVNYGRVANDLPDPAAVVQLLRDNGITMVRI
YDTDDAVLRSFANTGIKLMVMLPNENLADAARSPSYAADWARRRVAAYLPATRIHAVSVG
NEVFDSRPDLTPLLVPAMTNVHAALAQLGLADAIKVSTPLSFAAVAVSWPPSAGRFRDDI
AQPVMRPMLEFLQRTGSYLTINLYPYFAYAAQPDKISRDYFLGNPNPGVRDPDTGLMYYS
VLDAQRDATFSAMDKLGFTSLQAIPGETGSASAGRPKPGPRHNKPLHQPSWELAVGDDGD
GVRVDPPAASKANAQAYNNNVINRVLAGRTGTPLRPDADMDVYIFALFNENQKGSGPDDI
EANFGLFYPNMEKVYEFDFRGGGVPPAPGAESWCVANASVGESWLQAALEYACGHGADCS
AIQPGATCFEPDTVVAHASYAFNSYYQRNGRSNGTCDFNGAGYIVYQEPAGTCDPNASWC
VANAAVGDARLLDGLNYACANGADCSTIQPGAPCFEPNTMVAHASHAFNSYYQRNRRASG
TCDFAGAASVVYRAPKYGNCVLPSKASIEETIAKSEGEAAI

Transcript Sequence

Transcript ID

EER99489
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:69777273:69781238:-1 gene:SORBI_3002G328300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGCAGCGGGAGGAAGGTGCTGGTTTACACTTGGGAGGGTTACTGGCACCCGTTTGGCCG
CTCGATCGGAGCAAGCAGACTGTGGCGTCAAGTCGTCGTTAACCACCCCAATTGGTGCAT
GTGCATGCACCGAACAGATCAGCTGACTCAGCTCGGGCCCACTGCCACGTTGTCATTGTT
GCCTGCTAGCTACAAGTTCCCCGCACCCTTAGCTAGGTTCCTCAGCTTCCTACGTCTCGC
AGTCTTCCTCCTCTCGGTACTGCCGGGAGATCGAGCATGGCGCTCACTCGCCTCCTCGTT
CTCCTCCTCGGCGCCGCCGCATTGCCTGTGCTCTTGTTCCGCACTGCAGAGGCGCGCGAG
GTGGGCGTGAACTACGGCAGGGTGGCGAACGACCTGCCGGACCCGGCGGCGGTGGTGCAG
CTGCTCAGGGACAACGGCATCACCATGGTGCGGATCTACGACACCGACGACGCGGTGCTG
AGGTCGTTCGCCAACACCGGCATCAAGCTCATGGTGATGCTGCCCAACGAGAACCTGGCC
GACGCCGCGCGGAGCCCGTCGTACGCGGCCGACTGGGCGCGGCGCCGCGTGGCTGCCTAC
CTCCCGGCCACGCGGATCCACGCCGTCTCCGTGGGCAACGAGGTGTTCGACTCGAGGCCG
GACCTGACGCCGCTGCTCGTCCCCGCCATGACCAACGTGCACGCCGCGCTGGCGCAGCTG
GGCCTCGCCGACGCCATCAAGGTGTCCACGCCGCTGTCCTTCGCCGCGGTGGCCGTGTCG
TGGCCGCCGTCCGCGGGCAGGTTCCGGGACGACATCGCGCAGCCGGTGATGAGGCCCATG
CTCGAGTTCCTGCAGCGGACCGGCTCCTACCTCACCATCAACCTCTACCCTTACTTCGCC
TACGCCGCTCAGCCGGACAAGATCTCCCGCGACTACTTCCTCGGGAACCCCAACCCCGGC
GTGCGCGACCCGGACACCGGCCTCATGTATTACAGCGTCCTGGACGCGCAGCGCGACGCC
ACGTTCTCTGCCATGGATAAGCTTGGGTTCACCAGTCTTCAAGCAATTCCAGGGGAGACC
GGGTCAGCGTCTGCCGGCCGACCGAAACCTGGTCCTCGACACAACAAACCACTACACCAG
CCTTCTTGGGAGCTGGCCGTCGGGGACGACGGGGATGGAGTTAGAGTAGACCCGCCGGCG
GCCTCAAAGGCCAACGCGCAGGCGTACAACAACAACGTCATCAACCGCGTGCTGGCCGGC
AGGACGGGCACCCCGCTCCGCCCCGACGCCGACATGGACGTGTACATCTTCGCCCTGTTC
AACGAGAACCAGAAGGGTTCCGGGCCGGACGACATCGAGGCCAACTTCGGCCTCTTCTAC
CCCAACATGGAGAAGGTGTACGAGTTCGACTTCCGCGGCGGCGGCGTTCCGCCGGCGCCG
GGGGCGGAGAGCTGGTGCGTGGCGAACGCGTCGGTCGGGGAGTCGTGGCTGCAGGCGGCA
CTGGAGTACGCGTGCGGCCACGGCGCCGACTGCAGCGCCATCCAGCCCGGCGCGACGTGC
TTCGAGCCGGACACCGTGGTCGCGCACGCCTCGTACGCGTTCAACAGCTACTACCAGCGG
AACGGCCGGAGCAACGGGACGTGCGACTTCAACGGCGCCGGTTACATCGTCTACCAAGAA
CCAGCTGGCACCTGCGACCCGAACGCGAGCTGGTGCGTGGCGAACGCGGCGGTCGGGGAC
GCGCGGCTGCTGGATGGGTTGAACTATGCGTGTGCCAACGGCGCGGACTGCAGCACCATC
CAGCCGGGCGCGCCGTGCTTCGAGCCCAACACCATGGTCGCGCACGCCTCACACGCGTTC
AACAGCTACTACCAGCGCAACCGTCGGGCAAGCGGGACGTGCGACTTCGCCGGCGCCGCC
TCCGTCGTCTACCGGGCACCAAAGTACGGAAACTGCGTGCTCCCATCAAAGGCTTCGATT
GAAGAAACGATAGCAAAGTCGGAAGGCGAAGCTGCCATTTGATCCTCTGCCAAGAAACGC
AAAGTTGCGGGAGAAGCTGTTTTAGGGAGCTTCACAGTTCACACTATATATACTCAGTGT
TACCGGGTAGAACGGAACAAGGCAATAAAGCCCGGGAGCTGCAAATATAATTCGATCGGA
TCTGCTGGCCAGACCATCTGATCATCAGATCTGTCAGTCAGCGTGGCAATTTTTTTAAAT
TTTTTTTGGGAGTTTTCTTTTTTTTTAAAAAAAAAAAAATCTTCCACGCGCGTTCCTCTT
GTCAAAGTCTACCAATCTATATATTCCTATTATCTTATTAATTATTTTTTGGTCAACAAA
AGAAATCTTTGTGTTAATTCAACAAGCTACAAATTATTATTACATTATAATTGAAGAAAA
TATTTAAAAAATTATACATATCGATAAATAACAACCACTACCATTACATAACAATTTAAC
CCAAAAAAACACCCTTAACCTATTTCTCTAAAACCTGCCCGTGCCATTGTTAAAATCACA
TGAAGCCGTTTTGTTCGTTTGGCTGATAAACCATGGTAGAAAATACTGTTGGCAGATTTA
TTATGAGAGAAAAACACTGTTGAATGGCTGACAGATTCGGTTGATTTATTAAAAGGTCTG
TTTGTAACTGTGATGACCTTTCTTTTTATATAGCAGGTTTGTCTTCCTCTTATATATTTT
TTTCTCGAATACATAGAAAGATTTGTGCATCTTTATAATTAAGGTAGAGATATTTAGTAC
AAATACCATGTTTTTGACAAGCGCATCTTAAAGAGTTCTACAGGATTCTTGATTTGCAGC
CATGGGCTAAACCATCCTAGCATAGAGATAACAACCAGGATAAGGCAGTGAGTCAGCCTA
GAAAGATAGCTTGCGCTTCCGCCTCTATTGGCGCAACTCATTCCCAACGTCGTTGTTGAA
GAGTGCTGCCAGCACTTCCATGTTGGAAACGATGGGCTCGGTCTTGGTCTCGTAGAGCTT
CTTGTAGGCCTTTTATCGCCGAGATGCTTGGTGTTGACAACCCGGTGTCCAAACCCAATC
GTTGCATGATTAGGATATCACCTTACTTAGAAGCAGGCACCCGAGAGAGGCTTTGACCCG
CTTAACGCTTGCTTCGACGACGTGACAGCAAGTCAGCAACGCCTCTGCAGGTGACTGCAT
GGGAGGCTATGATAAATCGATAGGGTGGTCTTGTTAGGGCAGTCCCAATGGTAGAAACTA
CACACGTTTTCCAAAACATTCATATCATGTATGAAAACTATCATGCACAATGGAGGTTTC
CATCGCTAATAAATGTTTGCATTCTTTTTCTTTCTCCCTCTTAATTCCACGGTGATCAGA
ATACAAGCCATGACTGAAAACTCGGCAACTGCAGGACATGGTTAGGCGCTAGCGTGCGCG
GTCACCACGTTCTCCACCAGCACGCATCGTGCATAGGCTAAGAACACGGTTGCTCAAGAT
TGCAACCCAATGTAATACATATTCATTGAGATCAATACAATATATGTTGGCTCCCATTCG
TTTTCTACACCATGGAGGAGCAAGGACCATGGCGAGGAGCCTCGGAGAGCTGTGGGCTAG
CGCGTCACCCCGGCGGGCGAGCAGCCATGATACTAGCGAGCGAGCGCGG