Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99471
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:69488429:69490758:-1 gene:SORBI_3002G324000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGTCGCCGTTCTCCGTCCCCTCGCTGATCATGGAGGAGGAAGGGCGGTTCGAGGCG
GAGGTGGCGGAAGTGGAGTCATGGTGGACGACGGAGCGGTTCCGGCTCACCAAGCGCCCC
TACACCGCCCGCGACGTGGTCCTCCTCCGGGGCACGCTCCGCCAGAGCTACGCGTCGGGG
GAGATGGCCAAGAAGCTGTGGCGCACGCTCAAGGCGCACCAGGCCGGGGGCACGGCGTCC
CGCACCTTCGGCGCGCTGGACCCCGTCCAGGTCACCATGATGGCCAAGCACCTGGACACC
ATCTACGTCTCCGGCTGGCAGTGCTCCTCCACGCACACCTCCACCAACGAGCCCGGCCCG
GACCTCGCCGACTACCCCTACGACACCGTGCCCAACAAGGTGGAGCACCTCTTCTTCGCG
CAGCTCTACCACGACCGCAAGCAGCGGGAGGCGCGCATGTCGCTGCCCCGCGCCGACCGG
GCCAGGGCGCCCTACGTCGACTTCCTCAAGCCCATCATCGCCGACGGCGACACCGGGTTC
GGCGGCGCCACGGCCACCGTCAAGCTCTGCAAGCTCTTCGTCGAGCGCGGGGCGGCGGGC
GTCCACCTCGAGGACCAGTCGTCGGTCACCAAGAAGTGCGGGCACATGGCCGGGAAGGTG
CTCGTCGCGGTGTCGGAGCACGTCAACCGCCTCGTCGCCGCGCGGCTCCAGTTCGACGTC
ATGGGCGTCGAGACCGTCCTCGTCGCGCGCACCGACGCCGTCGCCGCCACGCTGATCCAG
ACCAACGTCGACGCGCGCGACCACCAGTTCATCCTCGGCGCCACCAACCCGCGCCTGAGG
GGACAGAGCCTGGCGGCCGTGCTGTCGGACGGCATGGCGGCGGGCAAGAACGGCAGGGAG
CTGCAGGCCATCGAGGACGAGTGGCTCGCCGCGGCGCAGCTCAAGACCTTCTCCGACTGC
GTCAGGGACGCCATCGCGGGGCTCGCCGTCTCCGCCCAGGAGAAGCAGCGCAGGGTCCAG
GAGTGGGACCGCGCCACCGGCGCTGGCGGCTACGACAGGTGCGTGTCCAACGAGCAGGCG
CGCGACATCGCCGCGGGGCTCGGCGTCGCGTCCGTGTTCTGGGACTGGGACCTCCCGCGG
ACCAGGGAAGGGTTCTACCGGTTCCGGGGCTCCGTGGGCGCCGCCGTGGTCCGGGGCCGC
GCCTTCGCGCCGCACGCCGACGTGCTGTGGATGGAGACGTCCAGCCCCAACGTGGCCGAG
TGCACCGCCTTCGCCGAGGGCGTCAAGGCGGCGTGCCCGGAGGCGATGCTGGCCTACAAC
CTCTCGCCGTCCTTCAACTGGGACGCCTCCGGGATGACGGACGCCGAGATGGCGGCCTTC
ATCCCCAGCGTCGCACGCCTCGGGTACGTCTGGCAGTTCATCACGCTCGCCGGGTTCCAC
GCCGACGCGCTCGTCACCGACACGTTCGCGCGGGACTTCGCGCGGCGGGGCATGCTGGCC
TACGTGGAGAGGATCCAGAGGGAGGAGAGGATCAACGGCGTGGAGACGCTGGAGCACCAG
AAGTGGTCGGGCGCCAATTTCTATGACAGGGTGCTCAAGACGGTGCAGGGTGGCATCTCC
TCAACTGCAGCCATGGGCAAAGGAGTTACTGAAGAGCAATTCAAGGATTCAAGGCCGGCA
ACTGGGAGCAGTGGCCTGCAAGTTATGGCCAAATCCAGGATTTGA

Peptide Sequence

PEP ID

EER99471
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:69488429:69490758:-1 gene:SORBI_3002G324000 transcript:EER99471 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSPFSVPSLIMEEEGRFEAEVAEVESWWTTERFRLTKRPYTARDVVLLRGTLRQSYASG
EMAKKLWRTLKAHQAGGTASRTFGALDPVQVTMMAKHLDTIYVSGWQCSSTHTSTNEPGP
DLADYPYDTVPNKVEHLFFAQLYHDRKQREARMSLPRADRARAPYVDFLKPIIADGDTGF
GGATATVKLCKLFVERGAAGVHLEDQSSVTKKCGHMAGKVLVAVSEHVNRLVAARLQFDV
MGVETVLVARTDAVAATLIQTNVDARDHQFILGATNPRLRGQSLAAVLSDGMAAGKNGRE
LQAIEDEWLAAAQLKTFSDCVRDAIAGLAVSAQEKQRRVQEWDRATGAGGYDRCVSNEQA
RDIAAGLGVASVFWDWDLPRTREGFYRFRGSVGAAVVRGRAFAPHADVLWMETSSPNVAE
CTAFAEGVKAACPEAMLAYNLSPSFNWDASGMTDAEMAAFIPSVARLGYVWQFITLAGFH
ADALVTDTFARDFARRGMLAYVERIQREERINGVETLEHQKWSGANFYDRVLKTVQGGIS
STAAMGKGVTEEQFKDSRPATGSSGLQVMAKSRI

Transcript Sequence

Transcript ID

EER99471
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:69488429:69490758:-1 gene:SORBI_3002G324000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAAGGCACGCTTTGCACTTGAATTCCCTCATCTCCAATCCAAGTGCGTGCGTGCCCCCCG
GCCGGCCGGCCCTCCTTCTCCGCTACCAGCCATGCCGTCGCCGTTCTCCGTCCCCTCGCT
GATCATGGAGGAGGAAGGGCGGTTCGAGGCGGAGGTGGCGGAAGTGGAGTCATGGTGGAC
GACGGAGCGGTTCCGGCTCACCAAGCGCCCCTACACCGCCCGCGACGTGGTCCTCCTCCG
GGGCACGCTCCGCCAGAGCTACGCGTCGGGGGAGATGGCCAAGAAGCTGTGGCGCACGCT
CAAGGCGCACCAGGCCGGGGGCACGGCGTCCCGCACCTTCGGCGCGCTGGACCCCGTCCA
GGTCACCATGATGGCCAAGCACCTGGACACCATCTACGTCTCCGGCTGGCAGTGCTCCTC
CACGCACACCTCCACCAACGAGCCCGGCCCGGACCTCGCCGACTACCCCTACGACACCGT
GCCCAACAAGGTGGAGCACCTCTTCTTCGCGCAGCTCTACCACGACCGCAAGCAGCGGGA
GGCGCGCATGTCGCTGCCCCGCGCCGACCGGGCCAGGGCGCCCTACGTCGACTTCCTCAA
GCCCATCATCGCCGACGGCGACACCGGGTTCGGCGGCGCCACGGCCACCGTCAAGCTCTG
CAAGCTCTTCGTCGAGCGCGGGGCGGCGGGCGTCCACCTCGAGGACCAGTCGTCGGTCAC
CAAGAAGTGCGGGCACATGGCCGGGAAGGTGCTCGTCGCGGTGTCGGAGCACGTCAACCG
CCTCGTCGCCGCGCGGCTCCAGTTCGACGTCATGGGCGTCGAGACCGTCCTCGTCGCGCG
CACCGACGCCGTCGCCGCCACGCTGATCCAGACCAACGTCGACGCGCGCGACCACCAGTT
CATCCTCGGCGCCACCAACCCGCGCCTGAGGGGACAGAGCCTGGCGGCCGTGCTGTCGGA
CGGCATGGCGGCGGGCAAGAACGGCAGGGAGCTGCAGGCCATCGAGGACGAGTGGCTCGC
CGCGGCGCAGCTCAAGACCTTCTCCGACTGCGTCAGGGACGCCATCGCGGGGCTCGCCGT
CTCCGCCCAGGAGAAGCAGCGCAGGGTCCAGGAGTGGGACCGCGCCACCGGCGCTGGCGG
CTACGACAGGTGCGTGTCCAACGAGCAGGCGCGCGACATCGCCGCGGGGCTCGGCGTCGC
GTCCGTGTTCTGGGACTGGGACCTCCCGCGGACCAGGGAAGGGTTCTACCGGTTCCGGGG
CTCCGTGGGCGCCGCCGTGGTCCGGGGCCGCGCCTTCGCGCCGCACGCCGACGTGCTGTG
GATGGAGACGTCCAGCCCCAACGTGGCCGAGTGCACCGCCTTCGCCGAGGGCGTCAAGGC
GGCGTGCCCGGAGGCGATGCTGGCCTACAACCTCTCGCCGTCCTTCAACTGGGACGCCTC
CGGGATGACGGACGCCGAGATGGCGGCCTTCATCCCCAGCGTCGCACGCCTCGGGTACGT
CTGGCAGTTCATCACGCTCGCCGGGTTCCACGCCGACGCGCTCGTCACCGACACGTTCGC
GCGGGACTTCGCGCGGCGGGGCATGCTGGCCTACGTGGAGAGGATCCAGAGGGAGGAGAG
GATCAACGGCGTGGAGACGCTGGAGCACCAGAAGTGGTCGGGCGCCAATTTCTATGACAG
GGTGCTCAAGACGGTGCAGGGTGGCATCTCCTCAACTGCAGCCATGGGCAAAGGAGTTAC
TGAAGAGCAATTCAAGGATTCAAGGCCGGCAACTGGGAGCAGTGGCCTGCAAGTTATGGC
CAAATCCAGGATTTGATGAAGACTCAGAAAGAATAATGATTCGGAGAAGGCCCTAAATAA
ATAAGAAAAAAAAATAAGTTGGAGTCAGATCATCAGCCATGGGAAGATGCTTTCCAAACT
GAACTATAATGAGCATAATGCATAAATGAATCGTCTAGCTAGCTATATACGAATGGAGTT
CTGAGTTATGACTCCAAATGGAAACCCAGGTTGGGTTGAAAGTATTGGTGTCAATCTGTG
AGATTATTTATCACTTGAGATTGAATACAAAATTTGATTATGAT