Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99230
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:65585643:65588410:-1 gene:SORBI_3002G272700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGTGGCGGCGACCCCCGATGACTGCGGCAGCTGGTTGCTGTACCTGTCCCTAGCC
GCCAAATGCGCCGGCGGCGACCAGCCTCACCGCCTGGCCGGTTTCCTGGCGGTCTGCGCC
GTGGCCTTCGTCGTCACTTGCCTCCTCCACTGGTGCTTCCCTGGAGGTCCGGCGTGGGGA
AGGTGGTGGTGGACGACGCAGGCGCGGCGGGTCGCGGCGGCCGCCGTTCCGGGGCCGAGG
GGCCTGCCCGTGGTCGGGAGCATGTGGCTCATGACGGGCCTGGCGCACCGCAAGCTGGCG
GCGGCGGCGGACAGCCTCCGCGCCAGGCGCCTGATGGCGTTCTCCCTCGGCGGCACGCGG
GTGGTGGTGGCCGCGCACCCGGACGTGGCGCGGGAGATCCTCAACAGCCCGGCGTTCGCG
GACCGTCCCATCAAGGAGTCCGCGTACGGGCTCCTGTTCCACCGCGCCATCGGCTTCGCG
CCCTACGGCGCCTACTGGCGCGCGCTCCGCCGCGTGGCGTCCACGCACCTCTTCTCCCCG
TGGCAGGTCGCCGCCTCCGCCGCGCAGCGCGCCGTCATCGCGCGCCAGATGGTCGCCGCC
ATGAAGCAGGAGCTGTCGTCGTCGTCGTCGGCCTCGGCCGGCTTCGAGGTCCGCCGCGTC
CTGCGCCGCGGGTCCCTGCACAACGTGATGTGGTCGGTGTTCGGCCGGCGGTACGACCTG
GAGCTGGACCCGGCCAAGGAGAGCCCCGAGACGCGGGAGCTGAGGAGCCTCGTGGACGAA
GGCTACGACCTGCTGGGCCAGCTCAACTGGTCCGACCACCTCCCCTGGCTCGCGCGCTTC
GACCTGCAGAGCACCAGGTCCAGGTGCGACCGCCTCGTCCCGCTCGTGAACCGCTTCGTC
GGCGGCATCATCGACGCGCACCGCGCCCGGAACGACCTCCGCTCCGCTCCACCACACGCC
GTCATGGACTTCACCGACGTGCTCCTCTCGCTGCCGGCCGACGACAGGCTCACCGACTCT
GACATGATCGCCGTCCTCTGGGAAATGGTGTTCCGTGGAACTGACACCGTTGCCGTGCTG
ATCGAGTGGGTGCTGGCGAGGCTCGTGCTGCACCCTGACGTGCAGGCCCGTGTCCACGAC
GAGCTGGACCGCGTGGTCGGGCGTGACCGGGCCGTGACCGAGTCCGACTCGGGGTCACTG
GTCTACCTGCACGCCGTGATCAAGGAGGTGCTCAGGATGCACCCGCCGGGCCCACTGCTG
TCGTGGGCGCGCCTGGCCACGTCGGACGTGCAGGTGGACGGGCACCTCATCCCCGCCGGC
ACCACCGCCATGGTGAACATGTGGGCCATAACGCACGACCCGGACGTGTGGGCGGAGCCG
GCGGAGTTCCAGCCGGAGAGGTTCATGGGATCCACCACCGGCGGCGAGTTCCCGATAATG
GGGTCGGACCTGAGGCTCGCGCCGTTCGGGGCGGGCCGGCGCAGCTGCCCCGGGAAGAGC
CTCGCCATGGCCACCGTGGCTCTCTGGCTCGCGACGCTGCTGCACGAGTTCGAGCTGCTC
CCGGCGCGCGGCGTCTACCTGTCGGAGGTGCTCAAGCTGTCGTGCGAGATGGCCGTCCCG
CTGGCCGTGACGGCGAGGCCCCGGCAAGCGGTGTGA

Peptide Sequence

PEP ID

EER99230
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:65585643:65588410:-1 gene:SORBI_3002G272700 transcript:EER99230 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVAATPDDCGSWLLYLSLAAKCAGGDQPHRLAGFLAVCAVAFVVTCLLHWCFPGGPAWG
RWWWTTQARRVAAAAVPGPRGLPVVGSMWLMTGLAHRKLAAAADSLRARRLMAFSLGGTR
VVVAAHPDVAREILNSPAFADRPIKESAYGLLFHRAIGFAPYGAYWRALRRVASTHLFSP
WQVAASAAQRAVIARQMVAAMKQELSSSSSASAGFEVRRVLRRGSLHNVMWSVFGRRYDL
ELDPAKESPETRELRSLVDEGYDLLGQLNWSDHLPWLARFDLQSTRSRCDRLVPLVNRFV
GGIIDAHRARNDLRSAPPHAVMDFTDVLLSLPADDRLTDSDMIAVLWEMVFRGTDTVAVL
IEWVLARLVLHPDVQARVHDELDRVVGRDRAVTESDSGSLVYLHAVIKEVLRMHPPGPLL
SWARLATSDVQVDGHLIPAGTTAMVNMWAITHDPDVWAEPAEFQPERFMGSTTGGEFPIM
GSDLRLAPFGAGRRSCPGKSLAMATVALWLATLLHEFELLPARGVYLSEVLKLSCEMAVP
LAVTARPRQAV

Transcript Sequence

Transcript ID

EER99230
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:65585643:65588410:-1 gene:SORBI_3002G272700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGCGCCGCCCTTCCGCCGCCCCGATCGCGCGCCCATCCGACCACACGTCTCGCATCTCT
TGCTAGCTACTACCCGCCGCCGGGCGCCGCCGCGGCGCATGCTCTTGCATGCATGGCCAT
CACATGCCCGGCCACGCCCCTCGGCGCCACGAGGGAACCCCCTCCGTTCCCCTACCGCGC
CGTCGTAGCTGTACGTGTCCCCGCCCCGCCCCGGCATAGCCTCCGGTCCCGTTACGCGTG
CCGGCGGGCGGCGGCGTCTGCTGCGCCCACCTCCCCGTGCGGAGTAGTACAAATATCTCG
CCTCATCATTAACCCGGCAGTTTAATGCCATTATTAGGGTATCCCTCGGCCCTTTGGGCG
CCACACCACACAATTTAACCGCTCAGACTTTACACCTTTGTGTCCGTTACCGCCTCCTCG
AGCCTATAAAAGCGCGCCTCGCCTCGCCCTTGCACCTCACTCAACCCGAGCGCCACTTCT
CCAAAGCATCAGCGAACGAGCGAGCTGAGGGAGCGAGAGAGAGAAAAGGATAGTGAAACA
CGAGAGAGCTAGGAGCCATGGCGGTGGCGGCGACCCCCGATGACTGCGGCAGCTGGTTGC
TGTACCTGTCCCTAGCCGCCAAATGCGCCGGCGGCGACCAGCCTCACCGCCTGGCCGGTT
TCCTGGCGGTCTGCGCCGTGGCCTTCGTCGTCACTTGCCTCCTCCACTGGTGCTTCCCTG
GAGGTCCGGCGTGGGGAAGGTGGTGGTGGACGACGCAGGCGCGGCGGGTCGCGGCGGCCG
CCGTTCCGGGGCCGAGGGGCCTGCCCGTGGTCGGGAGCATGTGGCTCATGACGGGCCTGG
CGCACCGCAAGCTGGCGGCGGCGGCGGACAGCCTCCGCGCCAGGCGCCTGATGGCGTTCT
CCCTCGGCGGCACGCGGGTGGTGGTGGCCGCGCACCCGGACGTGGCGCGGGAGATCCTCA
ACAGCCCGGCGTTCGCGGACCGTCCCATCAAGGAGTCCGCGTACGGGCTCCTGTTCCACC
GCGCCATCGGCTTCGCGCCCTACGGCGCCTACTGGCGCGCGCTCCGCCGCGTGGCGTCCA
CGCACCTCTTCTCCCCGTGGCAGGTCGCCGCCTCCGCCGCGCAGCGCGCCGTCATCGCGC
GCCAGATGGTCGCCGCCATGAAGCAGGAGCTGTCGTCGTCGTCGTCGGCCTCGGCCGGCT
TCGAGGTCCGCCGCGTCCTGCGCCGCGGGTCCCTGCACAACGTGATGTGGTCGGTGTTCG
GCCGGCGGTACGACCTGGAGCTGGACCCGGCCAAGGAGAGCCCCGAGACGCGGGAGCTGA
GGAGCCTCGTGGACGAAGGCTACGACCTGCTGGGCCAGCTCAACTGGTCCGACCACCTCC
CCTGGCTCGCGCGCTTCGACCTGCAGAGCACCAGGTCCAGGTGCGACCGCCTCGTCCCGC
TCGTGAACCGCTTCGTCGGCGGCATCATCGACGCGCACCGCGCCCGGAACGACCTCCGCT
CCGCTCCACCACACGCCGTCATGGACTTCACCGACGTGCTCCTCTCGCTGCCGGCCGACG
ACAGGCTCACCGACTCTGACATGATCGCCGTCCTCTGGGAAATGGTGTTCCGTGGAACTG
ACACCGTTGCCGTGCTGATCGAGTGGGTGCTGGCGAGGCTCGTGCTGCACCCTGACGTGC
AGGCCCGTGTCCACGACGAGCTGGACCGCGTGGTCGGGCGTGACCGGGCCGTGACCGAGT
CCGACTCGGGGTCACTGGTCTACCTGCACGCCGTGATCAAGGAGGTGCTCAGGATGCACC
CGCCGGGCCCACTGCTGTCGTGGGCGCGCCTGGCCACGTCGGACGTGCAGGTGGACGGGC
ACCTCATCCCCGCCGGCACCACCGCCATGGTGAACATGTGGGCCATAACGCACGACCCGG
ACGTGTGGGCGGAGCCGGCGGAGTTCCAGCCGGAGAGGTTCATGGGATCCACCACCGGCG
GCGAGTTCCCGATAATGGGGTCGGACCTGAGGCTCGCGCCGTTCGGGGCGGGCCGGCGCA
GCTGCCCCGGGAAGAGCCTCGCCATGGCCACCGTGGCTCTCTGGCTCGCGACGCTGCTGC
ACGAGTTCGAGCTGCTCCCGGCGCGCGGCGTCTACCTGTCGGAGGTGCTCAAGCTGTCGT
GCGAGATGGCCGTCCCGCTGGCCGTGACGGCGAGGCCCCGGCAAGCGGTGTGATGACGCG
TCACGGCGGCTGGGACGACGGAGCAGGCAGGCAGGCAGTCAGTTGGGGTATCAGTCTCAC
TGTGAGCATTATACCACAACTACTAGTAGTACTACTACTGTACACGGAATGGAAAAGCGC
TTGTGCTTTTGGGAGACGTTGCTACCGGTCACAGCTTGCAAGTTGCTACTACTGGGTCGA
CATGGGGTATATGCTTTTCATGTTACTATCTTCGATATGTATCGAGATCAGGTTGCCGAA
TGTGATACTTTGGCTTGTACTGTTAGCTTTTGTCTGGGTGCTCTTTTATTGCTTTTTTTT
TAAGTAGTAATCGCTGTAAGACTCGTAAAATGTATATGCTGGTTTGGATGGTTTTGGATT
GTAGCTCACAAACTAGTATTACGCAGTTCAATGCCTTAATATGCTATCTGTTCAATCATT
CCT