Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER99120
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:63846148:63852173:-1 gene:SORBI_3002G251900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTAAGGGACACGGCATACTACGACGTGTTGGAAGTGAGCCCGACGGCCACCGAGGCC
GAGATCAAGAAGGCGTACTACGTCAAGGCGAGGCAGGTCCATCCGGACAAGAACCCCAAT
GATCCGTTCGCGGCGGCGAGGTTCCAGGAATTGGGGGAGGCATACCAAGTGCTTAGTGAT
CCCACACAGCGTGAAGCTTATGACTCATATGGGAGATCTGGTATTTCAAGGGAAGCGATA
ATTGATCCTGCAGCAATTTTTGCAATGCTGTTCGGTAGCGAGCTTTTTGAGGACTACATT
GGCCAGCTGGCGATGGCATCCATGGCTTCACTTGATGATTTTAATGAAGATATCGATGCA
AGAAGGTTTCAAGAGCAAATGCGAGTTGTACAAAAAGAAAGGGAGGAGAAACTTGCAGAA
TTACTGAAAGATAGGTTGCACCTATATCTTCAAGGAAACAAAGAGGAATTTATCCAGTAT
GCTGAAGCTGAGGTTACTAGACTCTCTAACGCCGCATATGGTGTTGATATGCTGAGCACT
ATTGGTTATGTGTATTCAAGACAAGCTGCTAAGGAGCTTGGAAAGAAAGCTAAATATCTT
GGTGTTCCGTTTATTGCTGAATGGTTCAGAAACAAAGGACATTCTATTAAATCCCAACTG
ACAGCTGCAACATGTGCAATAGCACTTATGCAGCTGCAGGAAGACTTGAGAAAGCATCTC
AGTGCTGAGTGCCACTACAGCGAAGAGGAACTGGAGGCTTACATGCTGGAGCATAGGAGT
GTTATGGTGGATTCGTTATGGAAGCTTAATGTTGCTGATATAGAGGCAACCCTGTCACAT
GTGTGTCAAATGGTGCTTCAAGACAGCACTGCCAGGAAAGAGGAACTACGAGCTCGAGCT
AAAGGATTGAAAACTTTAGGCAAAATATTCCAGCAAGTTAAGCTTAGCACTACCGAGGGA
GATCCAGCAGCAATGAATAATACAATAAATAACTTGGATGAGAATGATGGTAGTTCACCG
GAGTCATCTCCAAGATCTCCCAGGGATCAAATGTTCCATGCAAATCCACCTTATTCCCAG
AGTCCATACGTGGAGGCCCCTCAGTTCGGCGGTTATTTTTCCTTCGACTTCCCAATGCCT
ATCGCTCCACCTGGTGCGCAGAGGGACCCCATTCCGTGA

Peptide Sequence

PEP ID

EER99120
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:63846148:63852173:-1 gene:SORBI_3002G251900 transcript:EER99120 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVRDTAYYDVLEVSPTATEAEIKKAYYVKARQVHPDKNPNDPFAAARFQELGEAYQVLSD
PTQREAYDSYGRSGISREAIIDPAAIFAMLFGSELFEDYIGQLAMASMASLDDFNEDIDA
RRFQEQMRVVQKEREEKLAELLKDRLHLYLQGNKEEFIQYAEAEVTRLSNAAYGVDMLST
IGYVYSRQAAKELGKKAKYLGVPFIAEWFRNKGHSIKSQLTAATCAIALMQLQEDLRKHL
SAECHYSEEELEAYMLEHRSVMVDSLWKLNVADIEATLSHVCQMVLQDSTARKEELRARA
KGLKTLGKIFQQVKLSTTEGDPAAMNNTINNLDENDGSSPESSPRSPRDQMFHANPPYSQ
SPYVEAPQFGGYFSFDFPMPIAPPGAQRDPIP

Transcript Sequence

Transcript ID

EER99120
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:63846148:63852173:-1 gene:SORBI_3002G251900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGTAGGTAGGTGTGCTAGTGCTTGTTACTACATCGCTTCAAGCACGCTGCCCACGTTGCC
CCCATGCGTGTTTTGCGCCGCTCGTCGTCGTCGTCGTCGATGTCGATGTGGTGGCTGTCC
TGCTACGGAGGGTAGGGGCGGCCGGGCGCCTTTTGCAGCTGTAGGGGGCGTCGGACTAGT
GGCTTTACACGCACGTACTAGTACCTGCGACCTGAGGGCGCCTCCACCGCCCATTCCGAA
CAACTCCCTTTTTCTCTCCTCTTTTTGAAGAAATCCAGTCATCCACTCAGGTCCGTTTCC
AATTCCATTCCATGCGTGCCAAACGGGAGCGATCGACCTCCTGACGCGTGCCGGGAACAA
CAGCAGCCTCTCTCATGCGTTGTTTGTATGAAGTTTATGGCAACTCTATATGCGTTTCGC
TTTTTTTTTTTTGCATGAAGCTTGCTTTTTCTTTACAAAACCAGAAACTGAGTTCAGGCG
AATCCCTACGTAGTAGGAAGTTGAAAGCAAAAAATTCAGCAAGAACTTTTAAATACGCGC
GGGCATTGTCCGGCCCAAGTGGTCACCACGTGGTGAGCCCCCAGACCTGAAACCCCGCTC
CATCCGCGCTCCCCCCGGCCTTCTTCGCGCTTGACTCCGTGGACCGGGGTCAGCGCCGGC
CATGTGGTCCACCTCACCATCAGCAGCGCGATATAATTAATCACTCGCGAAACCGCGGGA
GTAGCGAGGGAGTACTCCGTAGTGGGGTTTTAGTTTTAAGTTTTACCGAGAGGGGAACCC
GATTTTGACTAGCGAGAGAGAAGAGTTCCATGTCAATGTGACTCATCCCCGCATTATAAT
ACGGTGGAGGAGAGGAGAGGAGAGCGTGGGGGAAAAGAAAAGCACGCGAATTATTCGAGG
CGCTTTATGGTCGGATCACCCCAGCAACACCAAGCAGCCGCCACCCGCCAGCCAGTGCAT
TGCAGCAGCGCCAGCCACCTCGCACCCCCTCGCTGTCTCGCACCACCCGCGCGGAGCGGC
GGAGGGGAAGGAGGGAATCGGTGGGGGGGACGGCGAGCGGCGGCGGGAGATCCCGGGGGG
CTCCGATCGAGCGTAAGCGGGCGGGAGCAGAGCGCGCAGGGAGGGCAAGAGTAGAGTGGT
TCGATGGTAAGGGACACGGCATACTACGACGTGTTGGAAGTGAGCCCGACGGCCACCGAG
GCCGAGATCAAGAAGGCGTACTACGTCAAGGCGAGGCAGGTCCATCCGGACAAGAACCCC
AATGATCCGTTCGCGGCGGCGAGGTTCCAGGAATTGGGGGAGGCATACCAAGTGCTTAGT
GATCCCACACAGCGTGAAGCTTATGACTCATATGGGAGATCTGGTATTTCAAGGGAAGCG
ATAATTGATCCTGCAGCAATTTTTGCAATGCTGTTCGGTAGCGAGCTTTTTGAGGACTAC
ATTGGCCAGCTGGCGATGGCATCCATGGCTTCACTTGATGATTTTAATGAAGATATCGAT
GCAAGAAGGTTTCAAGAGCAAATGCGAGTTGTACAAAAAGAAAGGGAGGAGAAACTTGCA
GAATTACTGAAAGATAGGTTGCACCTATATCTTCAAGGAAACAAAGAGGAATTTATCCAG
TATGCTGAAGCTGAGGTTACTAGACTCTCTAACGCCGCATATGGTGTTGATATGCTGAGC
ACTATTGGTTATGTGTATTCAAGACAAGCTGCTAAGGAGCTTGGAAAGAAAGCTAAATAT
CTTGGTGTTCCGTTTATTGCTGAATGGTTCAGAAACAAAGGACATTCTATTAAATCCCAA
CTGACAGCTGCAACATGTGCAATAGCACTTATGCAGCTGCAGGAAGACTTGAGAAAGCAT
CTCAGTGCTGAGTGCCACTACAGCGAAGAGGAACTGGAGGCTTACATGCTGGAGCATAGG
AGTGTTATGGTGGATTCGTTATGGAAGCTTAATGTTGCTGATATAGAGGCAACCCTGTCA
CATGTGTGTCAAATGGTGCTTCAAGACAGCACTGCCAGGAAAGAGGAACTACGAGCTCGA
GCTAAAGGATTGAAAACTTTAGGCAAAATATTCCAGCAAGTTAAGCTTAGCACTACCGAG
GGAGATCCAGCAGCAATGAATAATACAATAAATAACTTGGATGAGAATGATGGTAGTTCA
CCGGAGTCATCTCCAAGATCTCCCAGGGATCAAATGTTCCATGCAAATCCACCTTATTCC
CAGAGTCCATACGTGGAGGCCCCTCAGTTCGGCGGTTATTTTTCCTTCGACTTCCCAATG
CCTATCGCTCCACCTGGTGCGCAGAGGGACCCCATTCCGTGATCACCATGAGTGCGTCAG
CTCTGTTTTGTGTGGATGGTCATTTTGTACAATATTGCTTGTGTAAATCATTTTTATCTG
TAACATTAGTAGCAGTAGTGTGATTGAGCAGCTTGGCACCCATTGCATCTTTTTCTTTTC
TCCCTTCGTGTAACGAATCAATGAAGCATGCGACGACGGCAGCCTTGTGTTGTGCGTAAC
AAAGGGCTGCTGGCCAGTGGCCACAGGTTGGCTTGCTCTGTTGCTGGCCACGGCTCACCC
ATCGTTGTACATGAACTATCACCTCCTCCTCTTTTGTTTCATGTGTTTATGGGTGCATAA
TTGTTTTAGCCTATGGCCCATCTGTGCAAACAACAGCACTTCTCATGAAAATCGATCATC
TCCTCTTT