Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98900
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:59159277:59164130:-1 gene:SORBI_3002G201700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACCTTGTCTGGGATGGCTGTTGCTTTCAAAGCAAGTACGAGTTCTACCACACAGCAA
CATTGGCCGAGTCCAACAAAGGACCGGTGCCAATATGGTTTCACTCAGTTAAGCAGGCAA
AAGTACAGGAAAAAATTTGCAGCACTGCATGTGACAGCTACATCAGGAAAGCTAGACCTA
GATTTCACTGACCCTTCTTGGAACCAAAAGTACCAGGAAGACTGGAACAGGCGTTTTAGT
TTGCCACACATCACTGATATATATGATTTGGAGCCAAGAAGAACTACATTCTCTTTGAAG
AAAAACAGAATTCCCCTGGGTGATGGTGATGGCTCATCAGCTGATATGTGGAACGGTTAT
GTAAATAAGAGTGATAGAGCCCTTCTGAAGGTGATAAAGTATGCCTCTCCTACTTCTGCT
GGAGCTTTGTGCATTGATCCTGATTGTAGCTGGGTGGAACACTGGGTTCATCGTGCAGGT
CCTCGTAAGGAGATATATTACGAACCTGAAGAAGTAAAGGCTGCCATTGTTACCTGTGGA
GGGCTCTGCCCTGGTTTAAATGATGTCATTAGACAGATAGTATTTACCTTGGAGATTTAT
GGGGTGAAGAATATTGTTGGAATCCCATTTGGTTATCGTGGATTTTTTGAGAAAGGCTTA
AAAGAAATGTCGCTTTCACGTGACGTGGTGGAAAACATAAATCTTTCTGGAGGAAGTTTC
CTAGGAGTCTCTCGTGGAGGAGCTAAAACTAGTGAAATTGTAGATAGTATACAGGCCAGA
AGAATTGACATGCTGTTTGTAATTGGTGGAAATGGTAGCCATGCAGGAGCTAATGCTATT
CATGAGGAGTGTCGAAAGAGAAAACTGAAAGTTTCAGTTGTAGCAGTTCCAAAGACCATT
GATAATGATATACTTTTTATGGATAAGACGTTTGGTTTTGATACAGCTGTGGAAGAAGCT
CAGCGTGCTATCAATTCTGCCTATATAGAGGCACGTAGTGCATACCATGGAATTGGGTTG
GTAAAATTAATGGGAAGAAGTAGTGGATTCATAGCCATGCATGCTTCTCTTTCCAGTGGA
CAGATTGATGTCTGCCTAATACCTGAGGTATCCTTCACACTCGATGGAGAACATGGTGTC
TTGCGACACCTTGAGCATTTACTTAATACAAAGGGATTTTGTGTGGTTTGTGTTGCTGAA
GGTGCAGGGCAGGATTTACTGCAAAAATCAAATGCAACTGATGCTTCAGGAAATGTGATA
CTTAGTGACTTTGGTGTCCACATGCAGCAGAAGATCAAGAAGCATTTCAAGGACATCGGT
GTTCCGGCTGATCTAAAATACATTGATCCAACATATATGGTTCGGGCCTGTCGGGCAAAT
GCATCTGATGCTATTCTCTGCACCGTACTTGGGCAAAATGCTGTCCATGGAGCATTTGCT
GGGTTCAGTGGCATCACGTCAGGTGTTTGCAACACACATTATGTGTACCTTCCCATCACA
GAGGTCATTACAACACCAAAGCACGTTAACCCCAACAGCAGAATGTGGCACCGCTGCCTC
ACATCCACTGGCCAGCCAGACTTCCATTGA

Peptide Sequence

PEP ID

EER98900
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:59159277:59164130:-1 gene:SORBI_3002G201700 transcript:EER98900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTLSGMAVAFKASTSSTTQQHWPSPTKDRCQYGFTQLSRQKYRKKFAALHVTATSGKLDL
DFTDPSWNQKYQEDWNRRFSLPHITDIYDLEPRRTTFSLKKNRIPLGDGDGSSADMWNGY
VNKSDRALLKVIKYASPTSAGALCIDPDCSWVEHWVHRAGPRKEIYYEPEEVKAAIVTCG
GLCPGLNDVIRQIVFTLEIYGVKNIVGIPFGYRGFFEKGLKEMSLSRDVVENINLSGGSF
LGVSRGGAKTSEIVDSIQARRIDMLFVIGGNGSHAGANAIHEECRKRKLKVSVVAVPKTI
DNDILFMDKTFGFDTAVEEAQRAINSAYIEARSAYHGIGLVKLMGRSSGFIAMHASLSSG
QIDVCLIPEVSFTLDGEHGVLRHLEHLLNTKGFCVVCVAEGAGQDLLQKSNATDASGNVI
LSDFGVHMQQKIKKHFKDIGVPADLKYIDPTYMVRACRANASDAILCTVLGQNAVHGAFA
GFSGITSGVCNTHYVYLPITEVITTPKHVNPNSRMWHRCLTSTGQPDFH

Transcript Sequence

Transcript ID

EER98900
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:59159277:59164130:-1 gene:SORBI_3002G201700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTCCACTATAATCTTTATATGACCTTGTCTGGGATGGCTGTTGCTTTCAAAGCAAGTACG
AGTTCTACCACACAGCAACATTGGCCGAGTCCAACAAAGGACCGGTGCCAATATGGTTTC
ACTCAGTTAAGCAGGCAAAAGTACAGGAAAAAATTTGCAGCACTGCATGTGACAGCTACA
TCAGGAAAGCTAGACCTAGATTTCACTGACCCTTCTTGGAACCAAAAGTACCAGGAAGAC
TGGAACAGGCGTTTTAGTTTGCCACACATCACTGATATATATGATTTGGAGCCAAGAAGA
ACTACATTCTCTTTGAAGAAAAACAGAATTCCCCTGGGTGATGGTGATGGCTCATCAGCT
GATATGTGGAACGGTTATGTAAATAAGAGTGATAGAGCCCTTCTGAAGGTGATAAAGTAT
GCCTCTCCTACTTCTGCTGGAGCTTTGTGCATTGATCCTGATTGTAGCTGGGTGGAACAC
TGGGTTCATCGTGCAGGTCCTCGTAAGGAGATATATTACGAACCTGAAGAAGTAAAGGCT
GCCATTGTTACCTGTGGAGGGCTCTGCCCTGGTTTAAATGATGTCATTAGACAGATAGTA
TTTACCTTGGAGATTTATGGGGTGAAGAATATTGTTGGAATCCCATTTGGTTATCGTGGA
TTTTTTGAGAAAGGCTTAAAAGAAATGTCGCTTTCACGTGACGTGGTGGAAAACATAAAT
CTTTCTGGAGGAAGTTTCCTAGGAGTCTCTCGTGGAGGAGCTAAAACTAGTGAAATTGTA
GATAGTATACAGGCCAGAAGAATTGACATGCTGTTTGTAATTGGTGGAAATGGTAGCCAT
GCAGGAGCTAATGCTATTCATGAGGAGTGTCGAAAGAGAAAACTGAAAGTTTCAGTTGTA
GCAGTTCCAAAGACCATTGATAATGATATACTTTTTATGGATAAGACGTTTGGTTTTGAT
ACAGCTGTGGAAGAAGCTCAGCGTGCTATCAATTCTGCCTATATAGAGGCACGTAGTGCA
TACCATGGAATTGGGTTGGTAAAATTAATGGGAAGAAGTAGTGGATTCATAGCCATGCAT
GCTTCTCTTTCCAGTGGACAGATTGATGTCTGCCTAATACCTGAGGTATCCTTCACACTC
GATGGAGAACATGGTGTCTTGCGACACCTTGAGCATTTACTTAATACAAAGGGATTTTGT
GTGGTTTGTGTTGCTGAAGGTGCAGGGCAGGATTTACTGCAAAAATCAAATGCAACTGAT
GCTTCAGGAAATGTGATACTTAGTGACTTTGGTGTCCACATGCAGCAGAAGATCAAGAAG
CATTTCAAGGACATCGGTGTTCCGGCTGATCTAAAATACATTGATCCAACATATATGGTT
CGGGCCTGTCGGGCAAATGCATCTGATGCTATTCTCTGCACCGTACTTGGGCAAAATGCT
GTCCATGGAGCATTTGCTGGGTTCAGTGGCATCACGTCAGGTGTTTGCAACACACATTAT
GTGTACCTTCCCATCACAGAGGTCATTACAACACCAAAGCACGTTAACCCCAACAGCAGA
ATGTGGCACCGCTGCCTCACATCCACTGGCCAGCCAGACTTCCATTGACTCTACTTCATT
AACACCTCTCAGCAAGGCACCAAGAGAATTGTTAATCCTGCAAGGGATTGCTAACAGGAA
ACTTGAATAAATCCGTCTTACGCAAAAAAAAAAATAGTGAGGTTGGAGGAGCTCATAGCG
AAATTGCTGGAGCCACTCCCCAGGTCATTCTGACGCCGTTCTCTTGGTTTGCCCCATAAG
TGAAAATAAAAATCTTATTGCTGCAAACGATTCTACAAAATCGCACCAGTACAAAACTGG
CGTCAGCACTGAGATGTTTTATTGATGATGTACTCTGTATAATAGGTTATTGGATATTCT
TACTAGGAAGTGCAGTGATCAGAGATGAGCTTTTGGTTGCAGCGTTTCGATGTTTGGTGG
TGTCCGTCTCGGGAGGTCAAGTATTGTACTGTGAACTTGTAATTTCTCTTCTTAAATGTA
CGGGTAGAGCGAATAGCGCTCATGCCCGTAGAGTAGAAGAAAATAATAAATTCTGTCTTG
GAAGTTGGAACTTAAGCCTGGGCCTGGCGCCAACACGTTGCAAGTTGCAATGGTAGAGC