Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98656
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:49091330:49097719:-1 gene:SORBI_3002G158900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCACTCCCGCGCCTGCGGCCAACGCCGACGGCGCTGCTCCGGGCGGCGTGGACAGC
CGCAGCGGCTACTGCGAGGTGACCAGGACGTTCCGTAGCCTGCGCCCGCCGGTGCCGCTG
CCGCCGCCGGACGCGCCGGTCTCGTTTCCGGAGTTCGCCTTCTCGCGCCTGACGTCGTCC
CCGCTCCCCGCGCACCCGGCTCTCCTCGACGCCGCCACCGGCGAGGTCCTATCGTTCCCG
GAGTTCCTGTCCCAGGTGCGCGCGCTCGCGGGGGCGCTTCGCTCCGTGGTCCGGCTCGGC
CGCGGCGACGTCGCGTTCATCCTCGCGCCGACGCGGCTGGACATCCCGGTGCTCTACTTT
GCGCTGCTCTCGTTCGGCGCCGTCGTGTCGCCGGTAAACCCCACGCTCACCGCGGACGAG
GTCGCGCGCCTCGTGGCGCTGTCGGGCGCGTCCGTCGCCTTCGCCGTGTCGGCGACCACC
GCAAAGCTGCCGGCTGGCCTCCCCACCATCCTCCTCGACTCGGACCGCTTCCGCTCCTTT
CTGCAGAGGCAGAACGACGGCCGTGGGGAGGAGGGACTGGCGGAGGTGCGGCAGTCGGAC
ACGGCGGTGATCCAGTACTCGTCGGGGACAACAGGGCGGGTGAAGGCCGCGGCGCTGCCG
CACCGGAGCTTCGTCGCGATGGTGGCAGGAGCCCACGCTGTGCTCGGGAAACCGAGGCAC
GGTCGCGAGAGGACGCTGCTGGGCGCGCCCATGTTCCACTCGCTGGGGTTCTACTCCGCG
CTGAAGGGTGTGGCGCTGGGGCACACGACGGTGGTGGTGACCGACGCGGTGGCGCGGCGC
GGCGTGAAGGGGGTGGTCGAGGCGGCGGAGAGGTGGGCGGTCGCTGAGATGACGGCGTCG
CCACCGGTGGTGGTGGCCATGGCCAAGGAGCGGTGCCGCCTGGAGGCACTGGAGCGCGTG
GTGTGTGGCGGCGCGCCGCTGCCGAGGACGGCAGCCGACAGTTTCCGACGACGGTTCCCC
AACGTGGATCTATGCATGGGCTACGGTTCAACTGAGGCTGGTGGCATATCGCTGATGATC
AGCCGGGAGGAGTGCGCCCGCATCGGTTCCGCCGGCCGTGTCTCGGAGAACGTGGAGGTG
AAGATCGTGGACCACGTCACCGGCAATGCCCTGTCCGTGGGCCAAAAAGGGGAGCTTCTC
GTGAGAGGGCCTGCCGTCATGACTGGATATGTTGGCGACGAGGAGGCCAACGCTAGTAGT
TTTGACTCTGAAGGATGGCTTAGGACTGGGGACCTTTGCTACATTGATCAGGACGGCTTC
TTGTTCGTGGTGGACAGGCTGAAAGAGCTCATCAAGTACAAGGGCTATCAGGTTCCACCT
GCAGAGCTGGAGCTTGTCCTGCAGTCTTTGCCGGAAGTTATCGATGCCGCAGTCATGCCG
TATCCTCATGAGGAGGCAGGGCAGATACCGGTGGCGCTTGTGGTCAGGCAGCCTGGTAGC
AAGGTCACGGAGGCTCAAGTCATAGACCACGTCGCAAAGAGGGTGGCCCCTTACAAGAAG
ATCCGCAAGGTGCTCTTCGTCGACTCCATACCCAAGTCTCCGGCTGGCAAGATACTGAGA
AGGCAGCTGACCAACCATGTGCAAGCTGGGGCTGTCTCTAGAATGTAA

Peptide Sequence

PEP ID

EER98656
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:49091330:49097719:-1 gene:SORBI_3002G158900 transcript:EER98656 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATPAPAANADGAAPGGVDSRSGYCEVTRTFRSLRPPVPLPPPDAPVSFPEFAFSRLTSS
PLPAHPALLDAATGEVLSFPEFLSQVRALAGALRSVVRLGRGDVAFILAPTRLDIPVLYF
ALLSFGAVVSPVNPTLTADEVARLVALSGASVAFAVSATTAKLPAGLPTILLDSDRFRSF
LQRQNDGRGEEGLAEVRQSDTAVIQYSSGTTGRVKAAALPHRSFVAMVAGAHAVLGKPRH
GRERTLLGAPMFHSLGFYSALKGVALGHTTVVVTDAVARRGVKGVVEAAERWAVAEMTAS
PPVVVAMAKERCRLEALERVVCGGAPLPRTAADSFRRRFPNVDLCMGYGSTEAGGISLMI
SREECARIGSAGRVSENVEVKIVDHVTGNALSVGQKGELLVRGPAVMTGYVGDEEANASS
FDSEGWLRTGDLCYIDQDGFLFVVDRLKELIKYKGYQVPPAELELVLQSLPEVIDAAVMP
YPHEEAGQIPVALVVRQPGSKVTEAQVIDHVAKRVAPYKKIRKVLFVDSIPKSPAGKILR
RQLTNHVQAGAVSRM

Transcript Sequence

Transcript ID

EER98656
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:49091330:49097719:-1 gene:SORBI_3002G158900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAACATGCCTAATAATGCTGTCACTTGTCACTAGTCCGTAATTACGGGACTGCAGGTCA
CCTACCAAGCACGGGCTAGGTGGCTGGCTTGTACCGTATCACACAGCCTGCGCCTGCTTG
GCCCCTTGCAATGTTGGCTGTTGCCACTTTTGCCACACAGATCTCTATAAGAAAAACCCC
AGCTGAAACCCGAAGACGGCACACGACAAAATCACCAACCACCGCAGTCACCAGTCACCA
CCAGGTGCCGAGAAGAAATGGCCACTCCCGCGCCTGCGGCCAACGCCGACGGCGCTGCTC
CGGGCGGCGTGGACAGCCGCAGCGGCTACTGCGAGGTGACCAGGACGTTCCGTAGCCTGC
GCCCGCCGGTGCCGCTGCCGCCGCCGGACGCGCCGGTCTCGTTTCCGGAGTTCGCCTTCT
CGCGCCTGACGTCGTCCCCGCTCCCCGCGCACCCGGCTCTCCTCGACGCCGCCACCGGCG
AGGTCCTATCGTTCCCGGAGTTCCTGTCCCAGGTGCGCGCGCTCGCGGGGGCGCTTCGCT
CCGTGGTCCGGCTCGGCCGCGGCGACGTCGCGTTCATCCTCGCGCCGACGCGGCTGGACA
TCCCGGTGCTCTACTTTGCGCTGCTCTCGTTCGGCGCCGTCGTGTCGCCGGTAAACCCCA
CGCTCACCGCGGACGAGGTCGCGCGCCTCGTGGCGCTGTCGGGCGCGTCCGTCGCCTTCG
CCGTGTCGGCGACCACCGCAAAGCTGCCGGCTGGCCTCCCCACCATCCTCCTCGACTCGG
ACCGCTTCCGCTCCTTTCTGCAGAGGCAGAACGACGGCCGTGGGGAGGAGGGACTGGCGG
AGGTGCGGCAGTCGGACACGGCGGTGATCCAGTACTCGTCGGGGACAACAGGGCGGGTGA
AGGCCGCGGCGCTGCCGCACCGGAGCTTCGTCGCGATGGTGGCAGGAGCCCACGCTGTGC
TCGGGAAACCGAGGCACGGTCGCGAGAGGACGCTGCTGGGCGCGCCCATGTTCCACTCGC
TGGGGTTCTACTCCGCGCTGAAGGGTGTGGCGCTGGGGCACACGACGGTGGTGGTGACCG
ACGCGGTGGCGCGGCGCGGCGTGAAGGGGGTGGTCGAGGCGGCGGAGAGGTGGGCGGTCG
CTGAGATGACGGCGTCGCCACCGGTGGTGGTGGCCATGGCCAAGGAGCGGTGCCGCCTGG
AGGCACTGGAGCGCGTGGTGTGTGGCGGCGCGCCGCTGCCGAGGACGGCAGCCGACAGTT
TCCGACGACGGTTCCCCAACGTGGATCTATGCATGGGCTACGGTTCAACTGAGGCTGGTG
GCATATCGCTGATGATCAGCCGGGAGGAGTGCGCCCGCATCGGTTCCGCCGGCCGTGTCT
CGGAGAACGTGGAGGTGAAGATCGTGGACCACGTCACCGGCAATGCCCTGTCCGTGGGCC
AAAAAGGGGAGCTTCTCGTGAGAGGGCCTGCCGTCATGACTGGATATGTTGGCGACGAGG
AGGCCAACGCTAGTAGTTTTGACTCTGAAGGATGGCTTAGGACTGGGGACCTTTGCTACA
TTGATCAGGACGGCTTCTTGTTCGTGGTGGACAGGCTGAAAGAGCTCATCAAGTACAAGG
GCTATCAGGTTCCACCTGCAGAGCTGGAGCTTGTCCTGCAGTCTTTGCCGGAAGTTATCG
ATGCCGCAGTCATGCCGTATCCTCATGAGGAGGCAGGGCAGATACCGGTGGCGCTTGTGG
TCAGGCAGCCTGGTAGCAAGGTCACGGAGGCTCAAGTCATAGACCACGTCGCAAAGAGGG
TGGCCCCTTACAAGAAGATCCGCAAGGTGCTCTTCGTCGACTCCATACCCAAGTCTCCGG
CTGGCAAGATACTGAGAAGGCAGCTGACCAACCATGTGCAAGCTGGGGCTGTCTCTAGAA
TGTAATTCTTCTTTATTTACTTGCATGTGTGCATGAGACAGAGATTGTGTGCAAAGAGAA
TTAGAGCACGATTTTTGAATTGAAAGAATAATACTGATGACAT