Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98436
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:16277702:16282471:-1 gene:SORBI_3002G122600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGTTGCAGCAGTCCAAGGAGGAGCTGCTGTACCAGCAGGTCAACTACGGCAACGTC
GACGGGATTCGCACCCTCCGGGGGCAGGGCGTTGGCCTTGAGTGGATTGACAAGGAAGGG
AAGACACCCCTGATGGTGGCCTGTATGCGGCCCGATCTGTTCGACGTAGCCAAGGTGCTG
ATCGAGTTGGGAGCTAATGTCAATGCCTACCGGCCTGGGTCACATTGTGGGACAGCATTG
CACCATGCTGCCAAGAAAGGACTTCAGCAGACTGTCCATTTACTACTCTCACATGGAGCT
AATCCATTCATACCAAACGATGATTGCAATACCGCCCTTGAATTGGCAAGGGAAAAAGGT
CATGTGAATGTTGTACGTGCCATAGAGGGACGGCTTTCTCTTTTTTGTGGATGGATGAGG
GAGAACTATGCTCCTGCTTTTTTGGATGCAATTGCTCCACAGTTCATGACAAGAAAAATT
TGGGCTGTTATTTTACCCCGTGAAGTGCGAACTCCAACCAGGCCTCTTAAGTTAGAGTTA
GCTATATATCCCGAATTACAGGCTTCTAAACCACGTGTTGTAGTTAAACTATGGAAATGT
CAAATTGAACAACCAAAGCTTAATCAGGCTGACCCTTCCATTATCATTTTTGACAAAGGA
ACAAAGACTCGATACAAGATCTTACCGGCCTATGAAGGTGACAAACAGCAGCTTCAATGG
TTTTATAATGCCTGTTGTGGCATGGCACAGGTTTTCAACACGGCTCCAGTACCACCAGCA
AATCTCCCAATGCCAAACCCGGCACCAGCAAATTCATCTGTGGCGCCTTCAGAACTATCT
GCACCCAGCAAGGAGGATGTTGAATTAGCAATGGCTATCAATGCCTCCATTCAATCAGCT
ATTGCAGAGGGAGTACCCAATGTTCAACCAAATGCATCCACTCCCAACAACAATGGCTGG
AGTATCCCTCCAAGTAATTCTCACAACGGATGGGGACCATCAGTCACTCCTGCACCATCA
AAGACGAGTGGCCAATCCCAAGCCCGGGTAGATGCCCCAAGCAGCAGCAGCACGTACAAT
GGATGGGATGTGCCTGGAACAAGCTCTGGTCAAAGTTCATCAAAACCCCACAAAACCGAA
ACCAACCCTCCAGTCTTGATTCCACAGGAAGCACTTCAGGCTCTTCCAACCCCAACCGCG
CCACCATTCGCTGAAGAAACCTTCTACAGTGGTCCTGTTCACTATCCATCCATAGACTCT
ACGCCTGTTGATGTAACCATGCCGGCTACCACCGAAGGCGGTACAACAGGCAGTACAACG
GCAGCAGCACCTACAAAACAGGAAGAAAACGAAGCTGATGCAAGTGACAGCGGCAAAACT
CCCTCCGGTACTTGTGTTATATGTTTGGATGCCCCTGTGGAAGGCGCCTGCATCCCATGC
GGTCACATGGCTGGCTGCATGTCCTGCTTGAAGGACATAGAGTCGAAGAAGTGGGGATGC
CCTATCTGCCGTGCCACGATTAACCAGGTTGTTCGCCTCTATGCTGTTTGA

Peptide Sequence

PEP ID

EER98436
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:16277702:16282471:-1 gene:SORBI_3002G122600 transcript:EER98436 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGLQQSKEELLYQQVNYGNVDGIRTLRGQGVGLEWIDKEGKTPLMVACMRPDLFDVAKVL
IELGANVNAYRPGSHCGTALHHAAKKGLQQTVHLLLSHGANPFIPNDDCNTALELAREKG
HVNVVRAIEGRLSLFCGWMRENYAPAFLDAIAPQFMTRKIWAVILPREVRTPTRPLKLEL
AIYPELQASKPRVVVKLWKCQIEQPKLNQADPSIIIFDKGTKTRYKILPAYEGDKQQLQW
FYNACCGMAQVFNTAPVPPANLPMPNPAPANSSVAPSELSAPSKEDVELAMAINASIQSA
IAEGVPNVQPNASTPNNNGWSIPPSNSHNGWGPSVTPAPSKTSGQSQARVDAPSSSSTYN
GWDVPGTSSGQSSSKPHKTETNPPVLIPQEALQALPTPTAPPFAEETFYSGPVHYPSIDS
TPVDVTMPATTEGGTTGSTTAAAPTKQEENEADASDSGKTPSGTCVICLDAPVEGACIPC
GHMAGCMSCLKDIESKKWGCPICRATINQVVRLYAV

Transcript Sequence

Transcript ID

EER98436
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:16277702:16282471:-1 gene:SORBI_3002G122600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGGTCAGCGGAAGCGGTGTCAGTCTCGCCTTCAATTTCCCACCCATTTCTCCCCGTTC
CCCGAACCACCACGCATTAAAAATCTCCCCCCTCATCCTGCCACTGCCAGCGCCCAATCC
AATCCCTACCTGCCCGGGAACCACCACCCGTCGGGCTCCTCCCGCCCTCCCCTCCTCGCC
GCATCCGCGGCGGGGATCTCCGGGCTGGTTCCGTCACCGGAGCGCCAATCGCCGCCCCGA
AACCCCCCGCGCACGCAGCACAACCCATTTTTTTTTGCCGCGATCGCCCACGGGAACCTC
CGCTGGTTGGGTCCCTGACCCTGAAAGCTCGATTCTAGGCGATTTTTGATTCGGATAACC
CTCTTCCTCCGATTTTGGTGCGCGTTGCGAGGGGCCGGGATGGGGTTGCAGCAGTCCAAG
GAGGAGCTGCTGTACCAGCAGGTCAACTACGGCAACGTCGACGGGATTCGCACCCTCCGG
GGGCAGGGCGTTGGCCTTGAGTGGATTGACAAGGAAGGGAAGACACCCCTGATGGTGGCC
TGTATGCGGCCCGATCTGTTCGACGTAGCCAAGGTGCTGATCGAGTTGGGAGCTAATGTC
AATGCCTACCGGCCTGGGTCACATTGTGGGACAGCATTGCACCATGCTGCCAAGAAAGGA
CTTCAGCAGACTGTCCATTTACTACTCTCACATGGAGCTAATCCATTCATACCAAACGAT
GATTGCAATACCGCCCTTGAATTGGCAAGGGAAAAAGGTCATGTGAATGTTGTACGTGCC
ATAGAGGGACGGCTTTCTCTTTTTTGTGGATGGATGAGGGAGAACTATGCTCCTGCTTTT
TTGGATGCAATTGCTCCACAGTTCATGACAAGAAAAATTTGGGCTGTTATTTTACCCCGT
GAAGTGCGAACTCCAACCAGGCCTCTTAAGTTAGAGTTAGCTATATATCCCGAATTACAG
GCTTCTAAACCACGTGTTGTAGTTAAACTATGGAAATGTCAAATTGAACAACCAAAGCTT
AATCAGGCTGACCCTTCCATTATCATTTTTGACAAAGGAACAAAGACTCGATACAAGATC
TTACCGGCCTATGAAGGTGACAAACAGCAGCTTCAATGGTTTTATAATGCCTGTTGTGGC
ATGGCACAGGTTTTCAACACGGCTCCAGTACCACCAGCAAATCTCCCAATGCCAAACCCG
GCACCAGCAAATTCATCTGTGGCGCCTTCAGAACTATCTGCACCCAGCAAGGAGGATGTT
GAATTAGCAATGGCTATCAATGCCTCCATTCAATCAGCTATTGCAGAGGGAGTACCCAAT
GTTCAACCAAATGCATCCACTCCCAACAACAATGGCTGGAGTATCCCTCCAAGTAATTCT
CACAACGGATGGGGACCATCAGTCACTCCTGCACCATCAAAGACGAGTGGCCAATCCCAA
GCCCGGGTAGATGCCCCAAGCAGCAGCAGCACGTACAATGGATGGGATGTGCCTGGAACA
AGCTCTGGTCAAAGTTCATCAAAACCCCACAAAACCGAAACCAACCCTCCAGTCTTGATT
CCACAGGAAGCACTTCAGGCTCTTCCAACCCCAACCGCGCCACCATTCGCTGAAGAAACC
TTCTACAGTGGTCCTGTTCACTATCCATCCATAGACTCTACGCCTGTTGATGTAACCATG
CCGGCTACCACCGAAGGCGGTACAACAGGCAGTACAACGGCAGCAGCACCTACAAAACAG
GAAGAAAACGAAGCTGATGCAAGTGACAGCGGCAAAACTCCCTCCGGTACTTGTGTTATA
TGTTTGGATGCCCCTGTGGAAGGCGCCTGCATCCCATGCGGTCACATGGCTGGCTGCATG
TCCTGCTTGAAGGACATAGAGTCGAAGAAGTGGGGATGCCCTATCTGCCGTGCCACGATT
AACCAGGTTGTTCGCCTCTATGCTGTTTGAAGAGTTGAAACGGTGGGTCCGGAAAGTTAG
CAATGGATGGTTCTCCCAATAGATTTTGATGGGAACGTCTCCGTCTCAAAATTGTGCAGT
TATGCTGTTGTGCACTTCGTACTGCACTGCAAAATATGACTTCCGTGTAATGTATGTGTG
CTGGCGCCTTATGTACATAGGTACTCCATGCAAGACAATTCAAAAAAAAAAGTATTGTTG
CAAGTTGCAACTCACGTTTACAGTTGCTGGAGAATGGCCGCTGGATGCTCGTGTCTCATC
CATTGAAGCGTGTTGC