Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98370
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:13119364:13125889:-1 gene:SORBI_3002G108400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTTCTTCCTCGTGTGCATGTCGACGCTCCTGTTCATCTCCATCTCTTCCTACGTC
TTCCAGCTGCTGGCCGACCGCCACCGCCGGCTTCCTCCGGGCCCCAGACCACTCCCGCTC
ATTGGCAACCTCCTCGACGTCGCGACCGAGCTGCCGCACCGCTCCCTCGCGCGCCTCGCC
GGACGCCACGGGCCCCTCATCACGGTCCGGCTAGGCACGCTACTCACCATCGTCGCCTCC
TCTCCGTCCACCGCCCGCGAGATCCTGCAGACGCACAACGGCAGCCTCACCGGCCGCAGC
CCGCCGGACGCGTGGCTCGCCCTGGGCCACGCTGCCAACTCCGTCTTCGTCCTCCCGCCC
GGCCGCAGGTGGCGCGCGCTGCGAAGGATCGGCACGGAGCACCTGCTCGCGGCGAGGCAG
CTCGACGGCGCTCGGGTCCGGCCGCTACTGCGGGACGGGGTCCTCGACCTCGTCCGCCGC
GTGTCTGAGCTTTCTGCGGCGGCGGAGGCGGCGGAGGCGGAAGCGCCGGTGGTTGAGGTC
GTGCACGCGGCGTTCGCGGCGATGATGGAGCTGCAGTGGCGCGCCATGTTCTCGGCGGGG
CTAGACGACGCGGCGGCGCGGGCGCTGCACGACGCCGCGCGGGAGGCCGTGGCGCTGTCC
CTGAAGCCCAACGTGTCGGACTTCTTCCCGGCGCTCGCCGCGGCCGACCTCCAGGGCGTG
CGGCGCGGCTTCGCGAGACGGGTGGCGTTGGTTTACAGGCTGGTCGACGAGGAGATCGAG
CGCCGGACGCGGGACCGGCGGGAAGCTGCTGGTGCTGGCGGCGGCGGTACTGTCAGCTCG
TGCGAGACGAAGGACCTTTTGGACGTGATGCTCGACATGTCGTTGGAGCAAGGGAAGGAC
GACGGCGTGACGATCAGCGTCAACAGAGATGTGATGAGAACATTTCTCACGGACATATTT
CTGGCGACTGTGGATACAATATCAAGCACGATCGAGTGGGCAATGGCGGAGCTCCTGCAG
CACCCAGACACCCTGCGGAAGATACAGCAAGAGCTCCGGAGCGTTCTCGGGTCCAAGCCG
AACGTGGAGCACTCCGACGTCGGCCGTCTCCCCTACCTCCGGGCAGCCATCAGGGAGACG
CTCCGGCTGCACCCGGTGGTGCCGCTGGTGCCCAACGAGGCTGAGCAGGCGGTGGAGATC
CATGGCCACGCCGTGCCCAAGGGCTGCACCGTGCTCGTCAACCTCTGGGCGGTGCACCGC
GACGCCGGGGAGTGGCCGGAGCCCGACAGGTTCGTGCCGGAGCGGTTCCTGCAGCCGCGG
CACGAGGAGACAGGCTTCGTGGGCACGACGGAGTTCGAGTTCATCCCGTTCAGCGCCGGC
CGCCGCGCCTGCCTCGGCCTGCCGCTCGCCGCCAGGATGCTGCACGCCATGCTCGGCTCG
CTGCTGCTCCGGTTCGACTGGGCGCTCCAGCGGGAGGCGACGGAGAATGGCGTGGACATG
TCCGAGAGTCTGGGGTTGACGATGACCATGGCTACCCCGCTCAAAGCTATAGCCAAGCCG
TGGGGTGTGTGA

Peptide Sequence

PEP ID

EER98370
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:13119364:13125889:-1 gene:SORBI_3002G108400 transcript:EER98370 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAFFLVCMSTLLFISISSYVFQLLADRHRRLPPGPRPLPLIGNLLDVATELPHRSLARLA
GRHGPLITVRLGTLLTIVASSPSTAREILQTHNGSLTGRSPPDAWLALGHAANSVFVLPP
GRRWRALRRIGTEHLLAARQLDGARVRPLLRDGVLDLVRRVSELSAAAEAAEAEAPVVEV
VHAAFAAMMELQWRAMFSAGLDDAAARALHDAAREAVALSLKPNVSDFFPALAAADLQGV
RRGFARRVALVYRLVDEEIERRTRDRREAAGAGGGGTVSSCETKDLLDVMLDMSLEQGKD
DGVTISVNRDVMRTFLTDIFLATVDTISSTIEWAMAELLQHPDTLRKIQQELRSVLGSKP
NVEHSDVGRLPYLRAAIRETLRLHPVVPLVPNEAEQAVEIHGHAVPKGCTVLVNLWAVHR
DAGEWPEPDRFVPERFLQPRHEETGFVGTTEFEFIPFSAGRRACLGLPLAARMLHAMLGS
LLLRFDWALQREATENGVDMSESLGLTMTMATPLKAIAKPWGV

Transcript Sequence

Transcript ID

EER98370
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:13119364:13125889:-1 gene:SORBI_3002G108400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAAAGATTTTGCTTTGGGCAAAGCAGCTGTGTCCGATAGTGATATTTGCTAGTCTATATA
TAAAGAGTTTGATAATGTGCTTTTACCTTAGAGGCCTATTAGAAATCTCAAGGATCAATG
TATTATTTCAGTCGATGTATAGACCTACCAATCGGCCATAAAGATTAGTATCAGTACGTG
TATGTACCCGATAAAAAAGTATCTGTACGTGTAGCCTTTAACGAAAATAGCACAATTATA
TTAGAATAAAAAAAATCTTGAAACACGTGTGGTGGAGTAGCATCCAATCCTCCGGTTTCC
CTCACTATAAATTGATGCCGATCGAAGCTATTGTCTAATTGCTGCTTGCAGACAAGGAAA
AAAAAAACAAGGAAATCAATCAATCAATCAAGCTATTGAAGAAAATGGCTTTCTTCCTCG
TGTGCATGTCGACGCTCCTGTTCATCTCCATCTCTTCCTACGTCTTCCAGCTGCTGGCCG
ACCGCCACCGCCGGCTTCCTCCGGGCCCCAGACCACTCCCGCTCATTGGCAACCTCCTCG
ACGTCGCGACCGAGCTGCCGCACCGCTCCCTCGCGCGCCTCGCCGGACGCCACGGGCCCC
TCATCACGGTCCGGCTAGGCACGCTACTCACCATCGTCGCCTCCTCTCCGTCCACCGCCC
GCGAGATCCTGCAGACGCACAACGGCAGCCTCACCGGCCGCAGCCCGCCGGACGCGTGGC
TCGCCCTGGGCCACGCTGCCAACTCCGTCTTCGTCCTCCCGCCCGGCCGCAGGTGGCGCG
CGCTGCGAAGGATCGGCACGGAGCACCTGCTCGCGGCGAGGCAGCTCGACGGCGCTCGGG
TCCGGCCGCTACTGCGGGACGGGGTCCTCGACCTCGTCCGCCGCGTGTCTGAGCTTTCTG
CGGCGGCGGAGGCGGCGGAGGCGGAAGCGCCGGTGGTTGAGGTCGTGCACGCGGCGTTCG
CGGCGATGATGGAGCTGCAGTGGCGCGCCATGTTCTCGGCGGGGCTAGACGACGCGGCGG
CGCGGGCGCTGCACGACGCCGCGCGGGAGGCCGTGGCGCTGTCCCTGAAGCCCAACGTGT
CGGACTTCTTCCCGGCGCTCGCCGCGGCCGACCTCCAGGGCGTGCGGCGCGGCTTCGCGA
GACGGGTGGCGTTGGTTTACAGGCTGGTCGACGAGGAGATCGAGCGCCGGACGCGGGACC
GGCGGGAAGCTGCTGGTGCTGGCGGCGGCGGTACTGTCAGCTCGTGCGAGACGAAGGACC
TTTTGGACGTGATGCTCGACATGTCGTTGGAGCAAGGGAAGGACGACGGCGTGACGATCA
GCGTCAACAGAGATGTGATGAGAACATTTCTCACGGACATATTTCTGGCGACTGTGGATA
CAATATCAAGCACGATCGAGTGGGCAATGGCGGAGCTCCTGCAGCACCCAGACACCCTGC
GGAAGATACAGCAAGAGCTCCGGAGCGTTCTCGGGTCCAAGCCGAACGTGGAGCACTCCG
ACGTCGGCCGTCTCCCCTACCTCCGGGCAGCCATCAGGGAGACGCTCCGGCTGCACCCGG
TGGTGCCGCTGGTGCCCAACGAGGCTGAGCAGGCGGTGGAGATCCATGGCCACGCCGTGC
CCAAGGGCTGCACCGTGCTCGTCAACCTCTGGGCGGTGCACCGCGACGCCGGGGAGTGGC
CGGAGCCCGACAGGTTCGTGCCGGAGCGGTTCCTGCAGCCGCGGCACGAGGAGACAGGCT
TCGTGGGCACGACGGAGTTCGAGTTCATCCCGTTCAGCGCCGGCCGCCGCGCCTGCCTCG
GCCTGCCGCTCGCCGCCAGGATGCTGCACGCCATGCTCGGCTCGCTGCTGCTCCGGTTCG
ACTGGGCGCTCCAGCGGGAGGCGACGGAGAATGGCGTGGACATGTCCGAGAGTCTGGGGT
TGACGATGACCATGGCTACCCCGCTCAAAGCTATAGCCAAGCCGTGGGGTGTGTGAAGGT
CGGTTCTCGGCGAAATTCGGTTCTACCGGACAGGCATGGAAAAAGGTTATACTATAGCCT
CTAAAGTTCGGACCTGAACAATATGTATTGTGCAACTTTTGTTGCAGGATTTCAAATAAT
ATTTATACAATGATGAATCCATAAGAAGAAATGTTGTAGTACAAATTCAGATAACCTCGA
GAACATGCATATCTGTCCACCGAAACCGCCGGTTGAGAGCAAAGCTGATATCCCCAAACA
AAAATGGGAGGTACCGCCTGCAGGATGGCTCAAATGCAACGTTGATGGAGCCTTTTATGA
GCAGCAGTGGAAAGGGGCTACTTGATTAGTCTTACGTGATGATGCAGGTGCCTTCGTCAG
AGGTGGCGCTAAGTGGTATGTTAGTTGATTGGATGCTTTATCCATGGAGTCCACGGTGTG
TAGAGATGGTTTATTGATGGCGAGGCAGGTTGGTGCCCAACGAATGTGGCTGGAGTCTGA
CTGTCACGAACTGGTAAAGCTTTGGCAAGCTGGGGATAGCCAACGATCAAGTGTGATGCC
TATTCTGAGGGAAATTCAGGATTTGAGCTTATTCTTTCAAGAGTTTAAGTTTTCTTTCAT
CAGTATGGTAGCTCATACACTAGCCAAACAGGTTTCGAGCAATACACAAGTCGGGTGGTG
GCATCTAGTTCCGGCATGTGTAGCGTCGCTACTAATCTCTGATTGTAATCCCAGTATTTG
ATATTGAATGAATCCCTCTTGTCGCAAAA