Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98354
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:12432621:12434692:-1 gene:SORBI_3002G105000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGACTCTGGCGGCGGCTCGCCGTGCCAAGAGAAGGAAGCCGGAGGCGCGCAAGAGC
CCCGAACAGGAGGGTGGAGCAATCATCTCGCCGCTGGTACCAGCGACGAGTGCGCCTGAA
TCCAATCCTCCGGGTCCGGGAGCCGGAGGAGATGAATCCCACATCCAAGATCCACCGCCT
GGAGCCGTCGGAGGGGAAGAAGACGGGGTCGACCGAATCAGCCTCCTCCCCAACGCCATT
CTGGGTGAGGTCATCTCTCTCCTCCCCACCAAGGATGCCGCCCGCACCCAAACCCTCGCC
ACCCGGTGGCGCCATCTCTGGCGCTCAGCCCCTCTCAACCTCGACGGCCGTGACGTTCGC
ACCATCGATGTCGTCTCCCGCATCCTCTCCGCCCACCGGGGCCCCGGCCGCCGCTTTCGC
TTCCCCTCACAACACCTGCGGTACTACCCCGCCATTGTGGATGCTTGGCTCCGATCCCCC
GCCCTCGACAACCTCCAGGAGATTGACTGCTGCATCGAAATGTATGCGCCGGATGTGTCG
CAAGCACCACCTCAGCCGGCGTCTACCTTCCGCTTCTCGTCGTGCCTTTGCGTGGCCACT
CTCAGCCAGTGCCACCTCTCCGACGACGTCGCCCAGGCGCTTCAGTTCCCCAAGCTCAAG
AAGCTCGCACTTCAATGGGTCAGCATTTCGGAGGATTCCCTGCATAGCATCATTGCTGCT
TCTCCCGTCCTCGAGTGCTTGCTGCTTAGCACCATCTTTGGCTTCCGCTGTGTCAGGATC
AGCTCAGCTAGCCTTACAAGCATTGGGGTGGGTGCTAATGGTCGGTATGAACCAACAGTG
ACATTCTTAGAAGAATTCATCATCGAGGATGCCCCTTGCCTTAAAAGGATTCTATATCAT
CGACCACCGCAATTGCCCATGCGAATGCAAGTGTCAGTTATTTCAGCACCCAGTCTAGAG
ACCTTGGGTTGCCTAAAATATTCTGATTACTCTTCCAGACTCACGTTGGGCTCTACGATT
ATTGAGCCATGCTACATAAAGGGATTCCAGGTCATTAACTCGACAACACCGGCATGTACT
GTCAAGATTTTAGCAGTCAATATTTTTAAACTTCGCCTGGATGTGATTATTGACTTAATA
AGATGCTTCCCATGCTTGGAGAAGTTGTATATCCAGTCATACAAGGAGGGAGACAATGAT
TTATGGCACCGTAAGCATCATAATCTTATTAAATGCCTTGACATCAGTCTCAAGACAGTC
GTGTTGAATAATTATCAAGGCATAAGGCCACAAGTTAACTTTGCCACATTCTTTGTATTG
AACGCAAAGATGCTGGAGTCAATGACATTTGAGTGCCAAAGGGACAGTGTGACTGATAGA
TTTCTTGCAAAGCAGCACCGGCTGCTCCAGCTGGAGAAAAGGGCTTCAAGATGCGCTCGG
TTTTATTTTACTACTGAAAGCTGTCGCCATGATTTTTTGCATATCAATCATGTCCATGAT
TTGTCTATAAGCGATCCCTTTGAATGTGTTGAAGCAGGGGTTGGTGCATGCATATCCTTT
GAGTAG

Peptide Sequence

PEP ID

EER98354
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:12432621:12434692:-1 gene:SORBI_3002G105000 transcript:EER98354 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

METLAAARRAKRRKPEARKSPEQEGGAIISPLVPATSAPESNPPGPGAGGDESHIQDPPP
GAVGGEEDGVDRISLLPNAILGEVISLLPTKDAARTQTLATRWRHLWRSAPLNLDGRDVR
TIDVVSRILSAHRGPGRRFRFPSQHLRYYPAIVDAWLRSPALDNLQEIDCCIEMYAPDVS
QAPPQPASTFRFSSCLCVATLSQCHLSDDVAQALQFPKLKKLALQWVSISEDSLHSIIAA
SPVLECLLLSTIFGFRCVRISSASLTSIGVGANGRYEPTVTFLEEFIIEDAPCLKRILYH
RPPQLPMRMQVSVISAPSLETLGCLKYSDYSSRLTLGSTIIEPCYIKGFQVINSTTPACT
VKILAVNIFKLRLDVIIDLIRCFPCLEKLYIQSYKEGDNDLWHRKHHNLIKCLDISLKTV
VLNNYQGIRPQVNFATFFVLNAKMLESMTFECQRDSVTDRFLAKQHRLLQLEKRASRCAR
FYFTTESCRHDFLHINHVHDLSISDPFECVEAGVGACISFE

Transcript Sequence

Transcript ID

EER98354
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:12432621:12434692:-1 gene:SORBI_3002G105000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTTGAGCCAGGCAGCCAGCCGTGTGCTCTTGTTCCCTGTTCCCCCACTCCCCCAGTCAC
CCACAGGCAGGCCATGGAGACTCTGGCGGCGGCTCGCCGTGCCAAGAGAAGGAAGCCGGA
GGCGCGCAAGAGCCCCGAACAGGAGGGTGGAGCAATCATCTCGCCGCTGGTACCAGCGAC
GAGTGCGCCTGAATCCAATCCTCCGGGTCCGGGAGCCGGAGGAGATGAATCCCACATCCA
AGATCCACCGCCTGGAGCCGTCGGAGGGGAAGAAGACGGGGTCGACCGAATCAGCCTCCT
CCCCAACGCCATTCTGGGTGAGGTCATCTCTCTCCTCCCCACCAAGGATGCCGCCCGCAC
CCAAACCCTCGCCACCCGGTGGCGCCATCTCTGGCGCTCAGCCCCTCTCAACCTCGACGG
CCGTGACGTTCGCACCATCGATGTCGTCTCCCGCATCCTCTCCGCCCACCGGGGCCCCGG
CCGCCGCTTTCGCTTCCCCTCACAACACCTGCGGTACTACCCCGCCATTGTGGATGCTTG
GCTCCGATCCCCCGCCCTCGACAACCTCCAGGAGATTGACTGCTGCATCGAAATGTATGC
GCCGGATGTGTCGCAAGCACCACCTCAGCCGGCGTCTACCTTCCGCTTCTCGTCGTGCCT
TTGCGTGGCCACTCTCAGCCAGTGCCACCTCTCCGACGACGTCGCCCAGGCGCTTCAGTT
CCCCAAGCTCAAGAAGCTCGCACTTCAATGGGTCAGCATTTCGGAGGATTCCCTGCATAG
CATCATTGCTGCTTCTCCCGTCCTCGAGTGCTTGCTGCTTAGCACCATCTTTGGCTTCCG
CTGTGTCAGGATCAGCTCAGCTAGCCTTACAAGCATTGGGGTGGGTGCTAATGGTCGGTA
TGAACCAACAGTGACATTCTTAGAAGAATTCATCATCGAGGATGCCCCTTGCCTTAAAAG
GATTCTATATCATCGACCACCGCAATTGCCCATGCGAATGCAAGTGTCAGTTATTTCAGC
ACCCAGTCTAGAGACCTTGGGTTGCCTAAAATATTCTGATTACTCTTCCAGACTCACGTT
GGGCTCTACGATTATTGAGCCATGCTACATAAAGGGATTCCAGGTCATTAACTCGACAAC
ACCGGCATGTACTGTCAAGATTTTAGCAGTCAATATTTTTAAACTTCGCCTGGATGTGAT
TATTGACTTAATAAGATGCTTCCCATGCTTGGAGAAGTTGTATATCCAGTCATACAAGGA
GGGAGACAATGATTTATGGCACCGTAAGCATCATAATCTTATTAAATGCCTTGACATCAG
TCTCAAGACAGTCGTGTTGAATAATTATCAAGGCATAAGGCCACAAGTTAACTTTGCCAC
ATTCTTTGTATTGAACGCAAAGATGCTGGAGTCAATGACATTTGAGTGCCAAAGGGACAG
TGTGACTGATAGATTTCTTGCAAAGCAGCACCGGCTGCTCCAGCTGGAGAAAAGGGCTTC
AAGATGCGCTCGGTTTTATTTTACTACTGAAAGCTGTCGCCATGATTTTTTGCATATCAA
TCATGTCCATGATTTGTCTATAAGCGATCCCTTTGAATGTGTTGAAGCAGGGGTTGGTGC
ATGCATATCCTTTGAGTAGTTACTGCCTGACTCTGTACTCCTGCTTGCTGTTAAATTGGA
TGAGGTCTATTCATTTTTCAAATGTTGGAGTAGGGGGTTGCTAAATGAACTGTGTATATT
GTAAGATTTGTGTAATTGTGGCAGTCTGACAGTGCCACAGTTTGGCCGTCTATAATCTGT
AATGCACTAAATCTTTATGCATAAGTTATTGGCAATGTTTGATGTGGGCATGTG