Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98315
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:10600605:10606169:-1 gene:SORBI_3002G098900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAAGCACTCAGCTGAATCTGGGGTTAGTATGCTGTTGCATGGAGACTTGGATTTA
CAAATAATTGAAGCAAAATGTCTCCCCAATATGGATCTCATGACAGAAAGGATGCGAAAA
TGCTTTACTGGGTATGGAGCTTGCAGCACTGATTGTGGGAAGTCGGAGAACGCCCACCCA
GACATGAGGAAGATCATTACTAGTGATCCATATGTTTCAGTTTGTCTTTCAGGAGCTACG
GTGGCACAAACTCGAGTCATTCCCAACTCGGAGAACCCTAAATGGGATGAGCACTTCTAT
GTTCAAGTTGCTCATTCAGTTAGCAGAATTGAGTTTCTTGTAAAGGACAACGATGTTTTT
GGGGCAGAGCTTATTGGTGTGGCTACAATACCAGTTGAGCACATCACACCAGGTGATATG
GTCGGTGGTTGGTTTCCAATTTCTGGTCAGTACAGTAATCCTATGAAGCCATCTCCTGAG
CTGCATTTAAATATCCAGTATAAGCCAATCGACATGAACCCACTATACAAGGATGGAGTT
GGTGCCGATGGCCCTCAGAGTGTTGGTGTCCCTAATGCTTATTTCCCTCTTAGGAAGGGT
GGTAGGGTCACACTGTATCAAGATGCTCATGTTCCTGACAATTTTCAACCTCAGATTGAG
ATAGATGGTGGGAGGACATATGAACAAAACAAATGCTGGGAAGATATTTGTCATGCAATC
ATTGAGGCTCATCACCTTATCTACATAGTCGGCTGGTCCTTGTATCACCCTGTGAAGCTT
GTAAGGGAGTCAACAAAACCTGTTCCCAATGGAAACCCTGTCACCATTGGGGAAATTTTG
AAGCGCAAAGTTCAAGAAGGAGTCCGTGTTATAGTGTTGCTTTGGGATGACAAAACATCA
CATGACAAATTTCTCTTAAAAACAGATGGTCTCATGCATACACATGATGAAGAAGCTCGA
AAATATTTCAGGCATTCAGGTGTCCATTGTGTGCTGTCTCCTCGCTATGCTAGCAACAAA
CTTAGCATTTTCAAGCAGCAGGTTGTAGGAACTTTATTTACACACCATCAGAAATGTGTC
ATTGTAGACACGCAAGCCACAGGAAACAATCGAAAAATAACTGCTTTTATTGGTGGTCTA
GACTTGTGTGATGGCAGATATGATACACCTGAACACAGGCTTTTCAAGGATTTAGATACT
ATTTTCAAGGACGATTTCCACAACCCCACATTCCCTGTTAATAAGCATGGACCCAGACAG
CCATGGCATGATTTACATTGTAAAATCGAGGGTCCTGCTGCATATGATATACTTACAAAC
TTTGAACAGAGATGGAGAAAATCTGCAAAATGGAAAGTCAGTGTCAGAAGAGCTGTGAGT
TGGCATCATGATACATTGGTAAAAATTGATAGGATGTCATGGATTGTTTCCCCCACTGCA
GATGAATTAAATGCACATGTTGTTGAAGAAAAGGATCCTGAAAACTGGCATGTACAGGTT
TTCCGATCAATTGATTCAGGATCTGTAAAAGGATTCCCAAAACTTGTTCAAGAGGCTGAA
TCCCAGAATCTTGTCTGTGCAAAGAATCTGCAGATAGACAAAAGCATACACAATGCATAT
GTTAAAGCGATCAGATCTGCGCAGCACTTTGTCTATATTGAAAATCAGTACTTTATTGGG
TCTTCATACTACTGGTCTGCACACCGAAGTGCAGGTGCTGAGAACCTAATACCAATTGAA
TTGGCCATAAAGATTGCAAGAAAGATTAAGGCAAAGGAAAGGTTTGCAGCATACATTGTT
ATACCGATGTGGCCCGAAGGCAATCCGACAACTGCTGCTATGCAGGAGATACTCTATTGG
CAGGGGCATACCATGTCCATGATGTACAAGATCGTCGCAGATGCTCTACGAAAGGAGGGT
CTACATGAAAGCCATCCACAGGAGTACCTGAACTTCTATTGCCTTGGCAAGCGTGAAGGT
TCCAATGAAGTTTCGTCGACAAGCAATTCCAATGAGAACTCTGCACTACGTTTGGCCCAG
AAGTTCAGGAGGTTCATGATCTATGTGCACTCAAAAGGGATGATTGTTGACGATGAGTAT
GTTCTCATCGGATCAGCCAACATAAACCAGAGGTCCATGGATGGCTCACGGGACACAGAG
ATCGCCATGGGTGCGTACCAGCCTCACTACAGCTGGGCTGGAAGCGGTAGCCCTCCAAAA
GGACAGGTGTATGGGTACAGGATGTCTCTTTGGGCGGAGCACCTGGGCACAGTGGAGGAG
TGCTTCCGCCGGCCGGAGTCTGAGGAGTGCGTGCAGCTGGTGAACCAGATGGCAGATGAT
AACTGGGCGTCCTATGTCTCGCCGCAGATGGTGGATATGAAGGGCCACCTCATGAAGTAC
CCCGTGAAGGTTGAACAGGATGGGAGGGTGGGACCGCTGCCTGGACAGGAGAGCTTCCCT
GATGTCGGCGGTAAGGTGCTGGGCACGCACTCGTCGCTCCCCAATGCGCTGACGACGTGA

Peptide Sequence

PEP ID

EER98315
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:10600605:10606169:-1 gene:SORBI_3002G098900 transcript:EER98315 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGKHSAESGVSMLLHGDLDLQIIEAKCLPNMDLMTERMRKCFTGYGACSTDCGKSENAHP
DMRKIITSDPYVSVCLSGATVAQTRVIPNSENPKWDEHFYVQVAHSVSRIEFLVKDNDVF
GAELIGVATIPVEHITPGDMVGGWFPISGQYSNPMKPSPELHLNIQYKPIDMNPLYKDGV
GADGPQSVGVPNAYFPLRKGGRVTLYQDAHVPDNFQPQIEIDGGRTYEQNKCWEDICHAI
IEAHHLIYIVGWSLYHPVKLVRESTKPVPNGNPVTIGEILKRKVQEGVRVIVLLWDDKTS
HDKFLLKTDGLMHTHDEEARKYFRHSGVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCV
IVDTQATGNNRKITAFIGGLDLCDGRYDTPEHRLFKDLDTIFKDDFHNPTFPVNKHGPRQ
PWHDLHCKIEGPAAYDILTNFEQRWRKSAKWKVSVRRAVSWHHDTLVKIDRMSWIVSPTA
DELNAHVVEEKDPENWHVQVFRSIDSGSVKGFPKLVQEAESQNLVCAKNLQIDKSIHNAY
VKAIRSAQHFVYIENQYFIGSSYYWSAHRSAGAENLIPIELAIKIARKIKAKERFAAYIV
IPMWPEGNPTTAAMQEILYWQGHTMSMMYKIVADALRKEGLHESHPQEYLNFYCLGKREG
SNEVSSTSNSNENSALRLAQKFRRFMIYVHSKGMIVDDEYVLIGSANINQRSMDGSRDTE
IAMGAYQPHYSWAGSGSPPKGQVYGYRMSLWAEHLGTVEECFRRPESEECVQLVNQMADD
NWASYVSPQMVDMKGHLMKYPVKVEQDGRVGPLPGQESFPDVGGKVLGTHSSLPNALTT

Transcript Sequence

Transcript ID

EER98315
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:10600605:10606169:-1 gene:SORBI_3002G098900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTGAATTGGAGTAGGGAGTTATTAGACAGACGTATGGAATTATGAATCGGAGATGTTTA
CACAAATCAAATACAAGTGGAGGAGGGAGCACTGATACAATCATGTGAAATTTTTGGATT
GTCTTCATTCTACTTTGATCCAATGCCCATGTTCCCAACCAGTCAATAGGAATTAGGATC
TTATGTTATTTAGAAAATCAAAAACTCCTGGTACTTTTGTCATAAACCAATTACTGAAAC
TCAATGCCACTGCATAACCAAGGAATTCAGGCTTTCGGGTCCATGTGGTAAACATTGCAA
AATATGTGCTATCTTCACTTTTCTGATTTTTTTATGCGTCCTCTGAAAATTGAGTTCACT
CTGCAGGTTCCTTCTGTATTTGGATAACCTATAAAGGTCTCAGCGCCCTTCAGTATGATT
TTGTTGGCAAAGGATGTTTTCTCCAGGATAATGACAGTTTAGCTTCTGGTTCATCTTATT
GTCTGGTGGATCTTTTTTATACCGTGATAAAATGGGGAAGCACTCAGCTGAATCTGGGGT
TAGTATGCTGTTGCATGGAGACTTGGATTTACAAATAATTGAAGCAAAATGTCTCCCCAA
TATGGATCTCATGACAGAAAGGATGCGAAAATGCTTTACTGGGTATGGAGCTTGCAGCAC
TGATTGTGGGAAGTCGGAGAACGCCCACCCAGACATGAGGAAGATCATTACTAGTGATCC
ATATGTTTCAGTTTGTCTTTCAGGAGCTACGGTGGCACAAACTCGAGTCATTCCCAACTC
GGAGAACCCTAAATGGGATGAGCACTTCTATGTTCAAGTTGCTCATTCAGTTAGCAGAAT
TGAGTTTCTTGTAAAGGACAACGATGTTTTTGGGGCAGAGCTTATTGGTGTGGCTACAAT
ACCAGTTGAGCACATCACACCAGGTGATATGGTCGGTGGTTGGTTTCCAATTTCTGGTCA
GTACAGTAATCCTATGAAGCCATCTCCTGAGCTGCATTTAAATATCCAGTATAAGCCAAT
CGACATGAACCCACTATACAAGGATGGAGTTGGTGCCGATGGCCCTCAGAGTGTTGGTGT
CCCTAATGCTTATTTCCCTCTTAGGAAGGGTGGTAGGGTCACACTGTATCAAGATGCTCA
TGTTCCTGACAATTTTCAACCTCAGATTGAGATAGATGGTGGGAGGACATATGAACAAAA
CAAATGCTGGGAAGATATTTGTCATGCAATCATTGAGGCTCATCACCTTATCTACATAGT
CGGCTGGTCCTTGTATCACCCTGTGAAGCTTGTAAGGGAGTCAACAAAACCTGTTCCCAA
TGGAAACCCTGTCACCATTGGGGAAATTTTGAAGCGCAAAGTTCAAGAAGGAGTCCGTGT
TATAGTGTTGCTTTGGGATGACAAAACATCACATGACAAATTTCTCTTAAAAACAGATGG
TCTCATGCATACACATGATGAAGAAGCTCGAAAATATTTCAGGCATTCAGGTGTCCATTG
TGTGCTGTCTCCTCGCTATGCTAGCAACAAACTTAGCATTTTCAAGCAGCAGGTTGTAGG
AACTTTATTTACACACCATCAGAAATGTGTCATTGTAGACACGCAAGCCACAGGAAACAA
TCGAAAAATAACTGCTTTTATTGGTGGTCTAGACTTGTGTGATGGCAGATATGATACACC
TGAACACAGGCTTTTCAAGGATTTAGATACTATTTTCAAGGACGATTTCCACAACCCCAC
ATTCCCTGTTAATAAGCATGGACCCAGACAGCCATGGCATGATTTACATTGTAAAATCGA
GGGTCCTGCTGCATATGATATACTTACAAACTTTGAACAGAGATGGAGAAAATCTGCAAA
ATGGAAAGTCAGTGTCAGAAGAGCTGTGAGTTGGCATCATGATACATTGGTAAAAATTGA
TAGGATGTCATGGATTGTTTCCCCCACTGCAGATGAATTAAATGCACATGTTGTTGAAGA
AAAGGATCCTGAAAACTGGCATGTACAGGTTTTCCGATCAATTGATTCAGGATCTGTAAA
AGGATTCCCAAAACTTGTTCAAGAGGCTGAATCCCAGAATCTTGTCTGTGCAAAGAATCT
GCAGATAGACAAAAGCATACACAATGCATATGTTAAAGCGATCAGATCTGCGCAGCACTT
TGTCTATATTGAAAATCAGTACTTTATTGGGTCTTCATACTACTGGTCTGCACACCGAAG
TGCAGGTGCTGAGAACCTAATACCAATTGAATTGGCCATAAAGATTGCAAGAAAGATTAA
GGCAAAGGAAAGGTTTGCAGCATACATTGTTATACCGATGTGGCCCGAAGGCAATCCGAC
AACTGCTGCTATGCAGGAGATACTCTATTGGCAGGGGCATACCATGTCCATGATGTACAA
GATCGTCGCAGATGCTCTACGAAAGGAGGGTCTACATGAAAGCCATCCACAGGAGTACCT
GAACTTCTATTGCCTTGGCAAGCGTGAAGGTTCCAATGAAGTTTCGTCGACAAGCAATTC
CAATGAGAACTCTGCACTACGTTTGGCCCAGAAGTTCAGGAGGTTCATGATCTATGTGCA
CTCAAAAGGGATGATTGTTGACGATGAGTATGTTCTCATCGGATCAGCCAACATAAACCA
GAGGTCCATGGATGGCTCACGGGACACAGAGATCGCCATGGGTGCGTACCAGCCTCACTA
CAGCTGGGCTGGAAGCGGTAGCCCTCCAAAAGGACAGGTGTATGGGTACAGGATGTCTCT
TTGGGCGGAGCACCTGGGCACAGTGGAGGAGTGCTTCCGCCGGCCGGAGTCTGAGGAGTG
CGTGCAGCTGGTGAACCAGATGGCAGATGATAACTGGGCGTCCTATGTCTCGCCGCAGAT
GGTGGATATGAAGGGCCACCTCATGAAGTACCCCGTGAAGGTTGAACAGGATGGGAGGGT
GGGACCGCTGCCTGGACAGGAGAGCTTCCCTGATGTCGGCGGTAAGGTGCTGGGCACGCA
CTCGTCGCTCCCCAATGCGCTGACGACGTGAGTTGGATGGAGCTTGAAGAAGCTCAAAGG
TGGCACATGGAGTGCTGAAGCTCTGCTCGTCACAATCGTTGGACGCGGTGCAACAAGTGG
TTGATACTTGGGAAAGTTGTTGGTCCGATTTCTAGCTTTAAGGCTGTAATGTATGATATG
AAGAAGTGTATGTATGTATTATAAATTATGATGAAAAGAGACGTGGGCAATATTATTCTT
TGGGCATTGCAATTTCTTTGGGGCTCAATGCCATTATATACGTTGATTTTTCATCATGGT
TGTAACAACCTCTGTGTTAAGCTAGGAACTACTTTA