Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98221
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:8650810:8656800:-1 gene:SORBI_3002G081400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCGGCGGCCGCGAGGGGCGCCGCGGCGCGCTCCCCTCTCCTCGTCCACCACCAC
CACCACCGCCGCCGCGGCCTCCCCCTGGTGCATCCCGGCGGCGGCGGGGGAGGCTCCCTC
CGGGTGGGCGGGCCCGGGATTGAGCCTCGACGGGAGGGGCGGAGGCGGGCCCGGGTCGGG
GTTAGGGTTTTCGCTCGCTACTCCCAGGCCCAGGATTTCTCCACACGCCTCCAAGATAGA
GTTGGCGAGTTGCCTAAATTAGTCGAGGACCTTCTCCAGACGTCGATTAGTACAGGGCCT
CGAGGTGCTTTCAGGATGGCACAAGGGATCCAAGCTGTGCTTGGGGTTGGCGGGGAGTGG
CTGAATGACCTCTCAAAGACAGCCAACACAGCAGCAGGAATTCCATCTCAGATGCAGCTT
GGTTTACTTTCTCCAGTTTACCTTAGAAGACTTTTTGAGCGCATGGGTGCAACTTATATC
AAGTTAGGTCAGTTTGTAGCATCTGCACCAACTTTGTTTCCTGCAGAATATGTTGAGGAA
TTCCAGAAGTGCTTTGACCAAGCACCAGCCGTCCCATATGATGTGATTGAATCAATATTA
CGTGAGGAGCTGCAGCGGCCATTGGATAGTGTATATGAATACATTGATCCGGTGCCAATA
GCCTCTGCCTCCATAGCACAGGTTCATGGGGCTAGGTTGAAGAGCTCTCAGAAGGATGTG
GTGATTAAAGTTCTAAAGCCTGGTATTGAGGATACTTTGGTTGCTGACCTGAATTTTATC
TATGTTGTTGCACGTGTTTTGGAGTTCTTGAACCCTGAACTACAGAGGACATCACTGGTA
GGCATTGTCAAGGACATAAAGGAATCAATGCTTGAAGAAGTTGACTTTAGAAAAGAGGCT
GCAAATATTCAGGCATTTCAGGGATACCTAGATGCAATGGGGTTTGACAGGCAGGCAAAA
GCCCCATTTGTGTATCAACACTGTAGTACAAAACGTGTGTTGACTATGGAAAGATTGTAT
GGAGTTCCGCTTACTGATCTTGATTCTATAAGATCTCTTGTTCCTGATCCTGAGTTGACT
TTAGTCACTGCCCTTAATGTCTGGTTTGGAAGCTTGATTTCATGTGAATCCTTCCATGCG
GATGTGCATGCTGGAAACCTATGGTTGCTCCGTGATGGGCGAATTGGTTTTATTGATTTC
GGGATTGTTGGTCGAATATCTCCAAGGACTTGGGCAGCTATGGAGGTCTTTTTGGCTTCT
TTTGCAACTGAGGATTATGATGCTATGGCCTCCGCCCTTTCTGAAATGGGTGCTACAGGG
AATGATATAAATATCAATGAATTTGCAAAGGACCTGCAGAAGATATTCTCATCAATACAG
GACTTGGATACTGAAATCATAGTTGCAACAGCAAGGACCCCTGATGCTACAGCAGTATCT
GCTAATGTTGTCCTTGATGAGAGACAGATGAATGCTCTATTTCTTGATCTGGTTAGGGTA
AGCGAGTCTTATGGGCTGAAATTTCCTCGAGAGTTTGCTCTTCTCATGAAGCAGCTTCTG
TATTTTGATCGCTACACAAGACTGTTGGCTCCCAGCATGAACATGCTGCGAGACGAGCGG
ATCAACATCTCCACCAATCGGCAACTGAGAAGAACTGATAGATTTTAG

Peptide Sequence

PEP ID

EER98221
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:8650810:8656800:-1 gene:SORBI_3002G081400 transcript:EER98221 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASAAARGAAARSPLLVHHHHHRRRGLPLVHPGGGGGGSLRVGGPGIEPRREGRRRARVG
VRVFARYSQAQDFSTRLQDRVGELPKLVEDLLQTSISTGPRGAFRMAQGIQAVLGVGGEW
LNDLSKTANTAAGIPSQMQLGLLSPVYLRRLFERMGATYIKLGQFVASAPTLFPAEYVEE
FQKCFDQAPAVPYDVIESILREELQRPLDSVYEYIDPVPIASASIAQVHGARLKSSQKDV
VIKVLKPGIEDTLVADLNFIYVVARVLEFLNPELQRTSLVGIVKDIKESMLEEVDFRKEA
ANIQAFQGYLDAMGFDRQAKAPFVYQHCSTKRVLTMERLYGVPLTDLDSIRSLVPDPELT
LVTALNVWFGSLISCESFHADVHAGNLWLLRDGRIGFIDFGIVGRISPRTWAAMEVFLAS
FATEDYDAMASALSEMGATGNDININEFAKDLQKIFSSIQDLDTEIIVATARTPDATAVS
ANVVLDERQMNALFLDLVRVSESYGLKFPREFALLMKQLLYFDRYTRLLAPSMNMLRDER
INISTNRQLRRTDRF

Transcript Sequence

Transcript ID

EER98221
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:8650810:8656800:-1 gene:SORBI_3002G081400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCAAGAGGAATATCACGCGGGCCGATCCTGCAATATCACGCGAGACGCAACGCCTGTTG
GCCGGTGAACGAGCAGAAGCAAGGCCGCAATCTTGCACACGTGTCGTCTCCTGCGCCGTT
ACACACATTTCGGACTCGAGGCTCCGAACGCTCTGCTCGCAGTCGCACGCACGGACTTTA
GACCTGCACACCGCTGCTGCGGCCTCCTACCACCTCTCCGCTCCCGTCGCCGGCGAGCCG
CGCGTCCACCCACCCATCCTCTCACGGATGGCTTCGGCGGCCGCGAGGGGCGCCGCGGCG
CGCTCCCCTCTCCTCGTCCACCACCACCACCACCGCCGCCGCGGCCTCCCCCTGGTGCAT
CCCGGCGGCGGCGGGGGAGGCTCCCTCCGGGTGGGCGGGCCCGGGATTGAGCCTCGACGG
GAGGGGCGGAGGCGGGCCCGGGTCGGGGTTAGGGTTTTCGCTCGCTACTCCCAGGCCCAG
GATTTCTCCACACGCCTCCAAGATAGAGTTGGCGAGTTGCCTAAATTAGTCGAGGACCTT
CTCCAGACGTCGATTAGTACAGGGCCTCGAGGTGCTTTCAGGATGGCACAAGGGATCCAA
GCTGTGCTTGGGGTTGGCGGGGAGTGGCTGAATGACCTCTCAAAGACAGCCAACACAGCA
GCAGGAATTCCATCTCAGATGCAGCTTGGTTTACTTTCTCCAGTTTACCTTAGAAGACTT
TTTGAGCGCATGGGTGCAACTTATATCAAGTTAGGTCAGTTTGTAGCATCTGCACCAACT
TTGTTTCCTGCAGAATATGTTGAGGAATTCCAGAAGTGCTTTGACCAAGCACCAGCCGTC
CCATATGATGTGATTGAATCAATATTACGTGAGGAGCTGCAGCGGCCATTGGATAGTGTA
TATGAATACATTGATCCGGTGCCAATAGCCTCTGCCTCCATAGCACAGGTTCATGGGGCT
AGGTTGAAGAGCTCTCAGAAGGATGTGGTGATTAAAGTTCTAAAGCCTGGTATTGAGGAT
ACTTTGGTTGCTGACCTGAATTTTATCTATGTTGTTGCACGTGTTTTGGAGTTCTTGAAC
CCTGAACTACAGAGGACATCACTGGTAGGCATTGTCAAGGACATAAAGGAATCAATGCTT
GAAGAAGTTGACTTTAGAAAAGAGGCTGCAAATATTCAGGCATTTCAGGGATACCTAGAT
GCAATGGGGTTTGACAGGCAGGCAAAAGCCCCATTTGTGTATCAACACTGTAGTACAAAA
CGTGTGTTGACTATGGAAAGATTGTATGGAGTTCCGCTTACTGATCTTGATTCTATAAGA
TCTCTTGTTCCTGATCCTGAGTTGACTTTAGTCACTGCCCTTAATGTCTGGTTTGGAAGC
TTGATTTCATGTGAATCCTTCCATGCGGATGTGCATGCTGGAAACCTATGGTTGCTCCGT
GATGGGCGAATTGGTTTTATTGATTTCGGGATTGTTGGTCGAATATCTCCAAGGACTTGG
GCAGCTATGGAGGTCTTTTTGGCTTCTTTTGCAACTGAGGATTATGATGCTATGGCCTCC
GCCCTTTCTGAAATGGGTGCTACAGGGAATGATATAAATATCAATGAATTTGCAAAGGAC
CTGCAGAAGATATTCTCATCAATACAGGACTTGGATACTGAAATCATAGTTGCAACAGCA
AGGACCCCTGATGCTACAGCAGTATCTGCTAATGTTGTCCTTGATGAGAGACAGATGAAT
GCTCTATTTCTTGATCTGGTTAGGGTAAGCGAGTCTTATGGGCTGAAATTTCCTCGAGAG
TTTGCTCTTCTCATGAAGCAGCTTCTGTATTTTGATCGCTACACAAGACTGTTGGCTCCC
AGCATGAACATGCTGCGAGACGAGCGGATCAACATCTCCACCAATCGGCAACTGAGAAGA
ACTGATAGATTTTAGTGACACCATTTTATTAGTCACCAGACATACTAGAGGAGTTGTGAT
GGGCGATAATAGCAAAGCTCATGTGACCCAATACTGTATATAGTTTTGCCAGACCAGCAT
AGAAATGAACCACACTAGAAATTGTACTCTTATTCGTATTCTGGAATTCGGCGTTATATA
TGTCGTACTAGCTACTAGGCAACATGTAAAAACTGTATGTAAACTGTCAAGTAAATTTTA
GTAGACAAATCAAGTTAAGATGCAGCTGTACTATACTACAACTGTCAGCACAAAAAGTGA
TGGGCTGGACAAAAAACTCTACTTCACCCAAAATTGGCTAGACCGAAACACGTTTCGTTG
CTTCTTCTCGGGGTCTCGTTGCATTTTATCGGGGTCACCACGAACTTATGGAGGGATTCT
ACTATATGACCGGACAGCACTGCAAAGTGGCTTTCAGATCCCAAC