Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98146
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:6686836:6688840:-1 gene:SORBI_3002G067500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCCACACCCGAGACCGAGAGCCATGAAGAGTCCGGCGCCGGTCTCGCCTGGGCTG
CTGGAGCAGATCGGCGGCCTCTGGTCGTCGCTCGCCGGCGTGATGCTCGTGTGGAGCATG
CTGCGGCCCTACCTCCCGCGCCAGCTGCTGGACCACTTCGCCGGGCGCTTCCTCCGGCGC
CACGCGCGGTGGCTTGTGGCGCTCGCCGACCCTTACCTCACCGTCACCGTCGCCGAGTAC
GACGGCGAGCGGCTGAAGCGCGGGGACGTGTACGAGCATGCCAAAGCGTACCTCAGCCAC
CGGTGCGCGCGCCGTGCGCGGGCGCTCCGCGCCGAGCCCGCGCGCAACGCCGACCGCTTC
GTGCTCACCCTGGGCGACAACGAGGAGGTCACCGACGAGTTCCGCGGCGCCACCGTGTGG
TGGCACTCCGTGCCGTCGCCCTCCCGCCACCATGGTCCCATCACGTGGTACGGCGGCGGC
GGCGGCGGCGGCGGCGTCGTCCTGGACGGCGCCGGCCGCACGTACCGCCTCGTGTTCCAC
CAGCGCCACCGCGACCTCGTCGTCGAGTCCTACCTTCCCCATGTCTGCCGCGAGGGCCGC
GCCATCATGGCCGCCAACCGCCGCCGGAAGCTCTTCACCAACTCCGGCGACAGGTACGGG
AACTGGAGGCACGTGGTGTTCGAGCACCCGTCGACGTTCGACACGCTGGCCATGGACCCG
GCTAAGAAGCGGGAGATCATGGACGACCTCGACGCGTTCCGGAACGGGAAGGACTACTAC
GCGCGCATCGGCAAGGCGTGGAAGCGCGGCTACCTCCTGTACGGCCCGCCGGGGACGGGC
AAGTCCACCATGATCGCCGCCATGGCCAACTACCTCGACTACAACATCTACGACATCGAG
CTGACATCCGTGGCCACCAACACCGACCTCCGGCGCATGTTCATCGAGACGAAGGGCAAG
TCCATCATCGTCATCGAGGACATCGACTGCTCCCTCGACCTCACCGGCAACCGCAGCAAG
AAGAAGCCGAAGAAGGCGCCGGTGCTGGTTCCCGGTCCCGGTCCCGCCGACGATGACGTG
ACGAAGGCGCCGCCGCCGGCGTCCGAGGGCGAGCAGTCCTCACCCCGCGACGCGACAGCC
AGTAAAGTGACGCTCTCCGGCCTGCTCAACTTCATCGACGGCCTCTGGTCGGCGTGCGGC
GGCGAGCGCATCATCGTGTTCACGACGAACCACGTGGAGCGGCTGGACCCGGCGCTGATC
CGGCGCGGCCGCATGGACAAGCACATCGAGATGTCCTACTGCTGCTTCGAGGCCTTCAAG
TTGCTGGCCAGGAACTACCTCGCCGTGGACGCCCACCCTCTGTTCGACGACGTCCGGGCG
CTGCTGCAGGAGGTGGACATGACGCCCGCCGACGTCGCCGAGCTCCTGACGCCCAAGTGC
GCCGCCGCCGCCGCCGCCGAGGACTCGTGCCTCGCCAACCTCGTGAAGGCGCTGCAGGTG
GCCAAGAAGGCCACCACGGCTGAGGCCTGTGGCGCCAGTTGCAGCATCGTCATCCACGAC
GACGAGGAGGTAGTGGAGGATGAGTAG

Peptide Sequence

PEP ID

EER98146
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:6686836:6688840:-1 gene:SORBI_3002G067500 transcript:EER98146 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPHPRPRAMKSPAPVSPGLLEQIGGLWSSLAGVMLVWSMLRPYLPRQLLDHFAGRFLRR
HARWLVALADPYLTVTVAEYDGERLKRGDVYEHAKAYLSHRCARRARALRAEPARNADRF
VLTLGDNEEVTDEFRGATVWWHSVPSPSRHHGPITWYGGGGGGGGVVLDGAGRTYRLVFH
QRHRDLVVESYLPHVCREGRAIMAANRRRKLFTNSGDRYGNWRHVVFEHPSTFDTLAMDP
AKKREIMDDLDAFRNGKDYYARIGKAWKRGYLLYGPPGTGKSTMIAAMANYLDYNIYDIE
LTSVATNTDLRRMFIETKGKSIIVIEDIDCSLDLTGNRSKKKPKKAPVLVPGPGPADDDV
TKAPPPASEGEQSSPRDATASKVTLSGLLNFIDGLWSACGGERIIVFTTNHVERLDPALI
RRGRMDKHIEMSYCCFEAFKLLARNYLAVDAHPLFDDVRALLQEVDMTPADVAELLTPKC
AAAAAAEDSCLANLVKALQVAKKATTAEACGASCSIVIHDDEEVVEDE

Transcript Sequence

Transcript ID

EER98146
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:6686836:6688840:-1 gene:SORBI_3002G067500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACCCGGTAGTGCACAGCACAGTCCACGTTCCGCAGTGCACAGCAGAGGAGTGCCCACAT
GCCGCCACACCCGAGACCGAGAGCCATGAAGAGTCCGGCGCCGGTCTCGCCTGGGCTGCT
GGAGCAGATCGGCGGCCTCTGGTCGTCGCTCGCCGGCGTGATGCTCGTGTGGAGCATGCT
GCGGCCCTACCTCCCGCGCCAGCTGCTGGACCACTTCGCCGGGCGCTTCCTCCGGCGCCA
CGCGCGGTGGCTTGTGGCGCTCGCCGACCCTTACCTCACCGTCACCGTCGCCGAGTACGA
CGGCGAGCGGCTGAAGCGCGGGGACGTGTACGAGCATGCCAAAGCGTACCTCAGCCACCG
GTGCGCGCGCCGTGCGCGGGCGCTCCGCGCCGAGCCCGCGCGCAACGCCGACCGCTTCGT
GCTCACCCTGGGCGACAACGAGGAGGTCACCGACGAGTTCCGCGGCGCCACCGTGTGGTG
GCACTCCGTGCCGTCGCCCTCCCGCCACCATGGTCCCATCACGTGGTACGGCGGCGGCGG
CGGCGGCGGCGGCGTCGTCCTGGACGGCGCCGGCCGCACGTACCGCCTCGTGTTCCACCA
GCGCCACCGCGACCTCGTCGTCGAGTCCTACCTTCCCCATGTCTGCCGCGAGGGCCGCGC
CATCATGGCCGCCAACCGCCGCCGGAAGCTCTTCACCAACTCCGGCGACAGGTACGGGAA
CTGGAGGCACGTGGTGTTCGAGCACCCGTCGACGTTCGACACGCTGGCCATGGACCCGGC
TAAGAAGCGGGAGATCATGGACGACCTCGACGCGTTCCGGAACGGGAAGGACTACTACGC
GCGCATCGGCAAGGCGTGGAAGCGCGGCTACCTCCTGTACGGCCCGCCGGGGACGGGCAA
GTCCACCATGATCGCCGCCATGGCCAACTACCTCGACTACAACATCTACGACATCGAGCT
GACATCCGTGGCCACCAACACCGACCTCCGGCGCATGTTCATCGAGACGAAGGGCAAGTC
CATCATCGTCATCGAGGACATCGACTGCTCCCTCGACCTCACCGGCAACCGCAGCAAGAA
GAAGCCGAAGAAGGCGCCGGTGCTGGTTCCCGGTCCCGGTCCCGCCGACGATGACGTGAC
GAAGGCGCCGCCGCCGGCGTCCGAGGGCGAGCAGTCCTCACCCCGCGACGCGACAGCCAG
TAAAGTGACGCTCTCCGGCCTGCTCAACTTCATCGACGGCCTCTGGTCGGCGTGCGGCGG
CGAGCGCATCATCGTGTTCACGACGAACCACGTGGAGCGGCTGGACCCGGCGCTGATCCG
GCGCGGCCGCATGGACAAGCACATCGAGATGTCCTACTGCTGCTTCGAGGCCTTCAAGTT
GCTGGCCAGGAACTACCTCGCCGTGGACGCCCACCCTCTGTTCGACGACGTCCGGGCGCT
GCTGCAGGAGGTGGACATGACGCCCGCCGACGTCGCCGAGCTCCTGACGCCCAAGTGCGC
CGCCGCCGCCGCCGCCGAGGACTCGTGCCTCGCCAACCTCGTGAAGGCGCTGCAGGTGGC
CAAGAAGGCCACCACGGCTGAGGCCTGTGGCGCCAGTTGCAGCATCGTCATCCACGACGA
CGAGGAGGTAGTGGAGGATGAGTAGACCTAGCTGATCCAAGATGTCGTTTGTTTAACTGC
ATCCTGTGTTATGTTGCAATCCTTATGGGAGTTGCATTATTCCTAATGTACTGTAGTGGT
CTGTGACTTTAGGTTCATCTTCAGACATGAATTGAGTTAACCTTGTTTGATTATCCTTCT
TTGGTCAATCTGTGCTTAGAGACACTCGTAAGGTGTTTTGTTATTGTTTGGCCTTCTCTA
TGGATGGATTAATTAGTTG