Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98019
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:4004226:4007688:-1 gene:SORBI_3002G041900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGTGACGCCGGACCAGCAGCAGCCACCACCACCAGCAGGGGCCTCCTCGACACCT
CCTCGCCTCCTCGTACACGTACACGAAACCACCCTCGTGCCGCCGTCTCCATCGCCGCCG
GAGACCTCGCTCCCGCTCACCTTCCTCGACGTCTTCTTTCTTCACTCCACGCCCGTCAAG
CGCCTCTTCCTCTACCGCCTCGCCGGCCCCGACGCCGACGTCGCCGCCATCATCTCCAGC
CTCCGGGACTCGTTGCACCAGGCCCTCCGTGCCTTCTACCCGCTCGCCGGCCGCGTCCGC
CTCACCCCCGGCACATCCGACCGCTACGAGCTGCACTACCGCCCCGGTGACGCCGTCACC
TTCACCGTCGCCGAGTGCGACGACGACATGCACTTCGACGGCCTCACCACCGACGAGCCG
CGGGAGGTTGCCAAGATCGCCGCGCTCGTGCCGCCGCTGCCCGACGGCGGCAAACTGCTC
GCCGTTCAGGCCACGCTCCTTCCCGCGCGCCGAGGTCTCGCCATCGGCGTCACTGTGCAC
CACGCCGCCTGCGACGGCTCTGGATCCACGCACTTCCTCCACACCTGGGCGGCCGCCTGC
AGAGGCGGCGCCGCCGAACCGTCGTTGCCGCCGCCGCCGCCGCCGCCTGTCATCGACCGG
ACTCTCCTCCCCGACCCAAGGCGCCTGTACGACGTCTTCGTCCAAGCGGCGCCGAGCAGC
CAAGAGCTGGAGTTCATCAAGGTGTCCGCCGACCAGCTCTTGGCCACGTTCGTGCTGTCC
AAGGACGACCTGACGCGCGTCAAGGACGTCGTGGCCGACGAGGCTACGAGGCGCGGCGTC
GCGCCGCCCCGGTGCTCCTCTCTCGTCGCCACCTTCGGCTTCGTCTGGTCGTGCTACCAG
CGAGCCAAGAACGGCGGCGGCGGAGAGGGCCCGATGATGACCTGCATGGTCATAGCCGTC
GACCACCGCTCGCGGATGAAGCCTCCCCTGCCGGACAAGTACCTGGGCAACTGCGTCGGC
CCAGCGTTCGCGCTGGCGCCAACGGGCGAGCTGGCCGTGGCTGGCGCAGGCGGGCTCTTC
AGCGCGTGCGCCGCCGTCGCCGCCTCCATTGACGAAGCTGTACGCGACATCGGGACGTCG
AGCATGGAGGCGTGGATGGACCGGATCAAGGAGGTGCTCCTGATGGATTTACTCACCGTG
TCCGGCTCGCCGAGGTTCCGCGTCTACGACCTGGACTTCGGATTCGGCCGACCGGCGAAG
GTGGAGGTCGTGCCCGTGACGAGGACCGGCGTAGTGGCGGTGGCGGAGAGCCGGGTTGGG
GACGGCGGGATAGAGGTGGGGGTCTCTCTCCAGCCGGCTGCCATGGGGAGCTACAAGAAG
TGCTTCGCGGATGCTATCGCGTGGCTCCACCAGAGAAGACATGAGAGCGACGACTCGTTC
TAA

Peptide Sequence

PEP ID

EER98019
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:4004226:4007688:-1 gene:SORBI_3002G041900 transcript:EER98019 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVTPDQQQPPPPAGASSTPPRLLVHVHETTLVPPSPSPPETSLPLTFLDVFFLHSTPVK
RLFLYRLAGPDADVAAIISSLRDSLHQALRAFYPLAGRVRLTPGTSDRYELHYRPGDAVT
FTVAECDDDMHFDGLTTDEPREVAKIAALVPPLPDGGKLLAVQATLLPARRGLAIGVTVH
HAACDGSGSTHFLHTWAAACRGGAAEPSLPPPPPPPVIDRTLLPDPRRLYDVFVQAAPSS
QELEFIKVSADQLLATFVLSKDDLTRVKDVVADEATRRGVAPPRCSSLVATFGFVWSCYQ
RAKNGGGGEGPMMTCMVIAVDHRSRMKPPLPDKYLGNCVGPAFALAPTGELAVAGAGGLF
SACAAVAASIDEAVRDIGTSSMEAWMDRIKEVLLMDLLTVSGSPRFRVYDLDFGFGRPAK
VEVVPVTRTGVVAVAESRVGDGGIEVGVSLQPAAMGSYKKCFADAIAWLHQRRHESDDSF

Transcript Sequence

Transcript ID

EER98019
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:4004226:4007688:-1 gene:SORBI_3002G041900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGAGGCTTGTCATGCCATGTCCACATGGGAGCTAGCTGTAGTTGAAAGGAACATTTTGA
CCAAATAGTGACCAGTTGCATCCGATCCTCCGTAGCTATTTATTGATCACCACAAAGACT
GAAGGTCGTCTCTGAATACAGAGAATGTGTGGAGAAATTAAAGGAGGTGGTAGTTACTCA
ACTTCGAGCTTATCTTTGCAGCAATTGGCAGTGTAGTTTTTATTTCGATTGCATCATGAA
TATACAAGACAATTTTTCATCAGAAAATTCTGACCTATTTTTAAATCGTCCTAGCTACTT
TTATACTTTCTTTCTCTTCTCTTGTATATTTACATCAGGATCATATTTTATTCCTTATTC
TTTTCACATCCTTGAATCGATTTTTTCCTAGCGGTAGCACGTGCGATAGGCGGAAACCGT
CGAACTCGAACGGATGCTACGGTCTAATGGGGCGCTAGCACCCCAAAATTGACCATTCTA
GATCCGGTTGATGTTTTATTGCCATGCATGACGCAACGTACCATCCAGAATATTATTAGC
ACGAATAGGAGGCGAGCAGACGAAGTTGACGCGAACAAGCGGGAGGCAAAATTTTCAGCA
AATCAACCCCTTTATGTACCTCGCATCTGCAGATCTGCTGATCTATCTGCGTCAGTCGAA
TTCCAATTCTCACCCAGTGCCTGCCGCAAGCTCGTCCGTCCTACGTTGATACCATTGGAG
GCCGGGCCGCCATGGCCGTGACGCCGGACCAGCAGCAGCCACCACCACCAGCAGGGGCCT
CCTCGACACCTCCTCGCCTCCTCGTACACGTACACGAAACCACCCTCGTGCCGCCGTCTC
CATCGCCGCCGGAGACCTCGCTCCCGCTCACCTTCCTCGACGTCTTCTTTCTTCACTCCA
CGCCCGTCAAGCGCCTCTTCCTCTACCGCCTCGCCGGCCCCGACGCCGACGTCGCCGCCA
TCATCTCCAGCCTCCGGGACTCGTTGCACCAGGCCCTCCGTGCCTTCTACCCGCTCGCCG
GCCGCGTCCGCCTCACCCCCGGCACATCCGACCGCTACGAGCTGCACTACCGCCCCGGTG
ACGCCGTCACCTTCACCGTCGCCGAGTGCGACGACGACATGCACTTCGACGGCCTCACCA
CCGACGAGCCGCGGGAGGTTGCCAAGATCGCCGCGCTCGTGCCGCCGCTGCCCGACGGCG
GCAAACTGCTCGCCGTTCAGGCCACGCTCCTTCCCGCGCGCCGAGGTCTCGCCATCGGCG
TCACTGTGCACCACGCCGCCTGCGACGGCTCTGGATCCACGCACTTCCTCCACACCTGGG
CGGCCGCCTGCAGAGGCGGCGCCGCCGAACCGTCGTTGCCGCCGCCGCCGCCGCCGCCTG
TCATCGACCGGACTCTCCTCCCCGACCCAAGGCGCCTGTACGACGTCTTCGTCCAAGCGG
CGCCGAGCAGCCAAGAGCTGGAGTTCATCAAGGTGTCCGCCGACCAGCTCTTGGCCACGT
TCGTGCTGTCCAAGGACGACCTGACGCGCGTCAAGGACGTCGTGGCCGACGAGGCTACGA
GGCGCGGCGTCGCGCCGCCCCGGTGCTCCTCTCTCGTCGCCACCTTCGGCTTCGTCTGGT
CGTGCTACCAGCGAGCCAAGAACGGCGGCGGCGGAGAGGGCCCGATGATGACCTGCATGG
TCATAGCCGTCGACCACCGCTCGCGGATGAAGCCTCCCCTGCCGGACAAGTACCTGGGCA
ACTGCGTCGGCCCAGCGTTCGCGCTGGCGCCAACGGGCGAGCTGGCCGTGGCTGGCGCAG
GCGGGCTCTTCAGCGCGTGCGCCGCCGTCGCCGCCTCCATTGACGAAGCTGTACGCGACA
TCGGGACGTCGAGCATGGAGGCGTGGATGGACCGGATCAAGGAGGTGCTCCTGATGGATT
TACTCACCGTGTCCGGCTCGCCGAGGTTCCGCGTCTACGACCTGGACTTCGGATTCGGCC
GACCGGCGAAGGTGGAGGTCGTGCCCGTGACGAGGACCGGCGTAGTGGCGGTGGCGGAGA
GCCGGGTTGGGGACGGCGGGATAGAGGTGGGGGTCTCTCTCCAGCCGGCTGCCATGGGGA
GCTACAAGAAGTGCTTCGCGGATGCTATCGCGTGGCTCCACCAGAGAAGACATGAGAGCG
ACGACTCGTTCTAAATCTGCAGAAACGGAATCTTTACCGTGTGATGAAAAGGGGGCCTGC
CATATGTCAGGTGTCTGAAATTTCACATCTAATCAGCCGTTGATTCTCATTAATTACATC
TAAATCAAATGGTTTTGGAGTTTCTTTTTTCCTTTGTATGTTTCCTTTCCGTTGTCCGGT
GTCTTTGGTTGTGCGTTTTCAGACGCCTACTAAATTTTAGTACATTTTAGCAAGTGTGGA
TGAAAAAATAACTTTCCCTCCCTTCCAAACAATCGATGTTTTAGCTTTCCTACTAAATAA
ACTTTTGCTATTTCCAATAAATATACAATATATCTACATATATTGTAAAAATTAAATATC
AAACATCTTATATTTTAGAATGGAGGGGTGATAAAATTGCCACTGCAAAATAATTAGTTT
TATAAAGTACTAGTACTAGACATGATATTTGTTCATGTACAAGAGTTGTATAAACGTGTT
GGTTTTTAGTACTTTCTCCATTCTAAATTGTAAACCGTTTTCGTTTTTCTAAATGTATAG
ATTTTACTATGTATCTAGATAAATGTATATCTAGATGCACAATAAAATCTATGAATTTTG
AAAAGTCAAAATGAATTACAATTTAGAGGAAATACATTAAAATAATGGGAGTGGTGTTGC
ATGGACCGAGTCTGAATCAACTAGTATATTGCCTTTGCTTACACCATGGTGGCATTTTAG
ATGATGCAAACAACCAAACACGGCATAAAAAGGAGCAATACAAATTTACATGGTTATTAT
ATTATTTAATCCAAAAATGATCAAACATATATATATACGACAAGGATTAACTTAATCCAT
GCCTCCAATATATATATGTGTGTTTAAGAAAAAAATATGTGGTTAAGGTAGGAGTACATA
AGGAATTGCAGAAAGAAACATCTAAATCATCCAATCCCCCTACCAATCAGGTCATGGGGA
GAGAATGTCCCCCACGACCTTTCGCAGGGATGGGGAAGGGAAAATATTCTCCCACGGGGA
TGGAGATGTGGATGGGAAGACAATACCTAGTGGAGAATTCTCCGTTGTCATCTTTATTAA
TAACTGCAACGTGTGCTTTTAATGAACCAACTGCAAATAAGAATTGTATCATCAAGATGA
AAAGAATAGATTCGTTTAGCCCAATCTGTTAGTACACTTTTTGATTTGCTGGTCTCCAAA
ATCTCAAGCCAATGATGACATTTTGTAGTATTGTCAAGATTTTTTCGATAATGATATTTC
AGTTCTAATTTGCCTCTAATATTGTCATAGTGTTAACACGGCC