Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER98014
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:3931891:3937297:-1 gene:SORBI_3002G040800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAACACCTGCGTGGGCCCCAGCACCCCCTCGGACCGCCACAGCTTCTTCAACACC
GTCTCCCTCGCCGTGCTCTGGCGCCCCCCGGCCGCCGCCGCCGCCGCCGCCCGCGCCGAG
CCTTCCCCGACCACTGAACCCAGCTCCTCCACTCCCTCCAGGGCACCTGACCCCGTCACC
ATCTCCGACTCCGAGCACCCGCCACACTCCACCTCCACCTCCACCGCCTCAGTCCCGGCC
GCAGCGCCGCCCAATCCTAACGGCAAGCCCAAGCCCAAGGTGAAGCGCGTGCAGAGCGCG
GGCCTGCTCGCGGGCTCCGTGCTGAGGCGCGACTCCGAGCGGCTCAAGGACCTGTACACC
CTGGGCAAGAAGCTCGGGCAGGGGCAGTTCGGCACCACCTACCAGTGCGTCGAGAAGGCC
ACGGGGAAGCACTTCGCCTGCAAGTCCATCGCCAAGCGGAAGCTCGTCAACGAGGAGGAC
GTTGAGGACGTGCGCCGCGAGATCCAGATCATGCACCACCTGTCCGGCCACCCCAACGTC
GTGTCCATCGTCGGAGCCTACGAGGACGCCGTCGCCGTGCACCTCGTCATGGAGCTGTGC
GCCGGAGGGGAGCTGTTCGATAGGATCATACAGCGCGGGCACTACTCTGAGAAAGCAGCC
GCACAGTTGGCCCGGGTGATCATTGGGGCTGTAGAAGCATGCCATTCGCTCGGGGTGATG
CACAGAGACCTCAAGCCAGAGAATTTCTTGTTTGTCAACCAAAAGGAGGATGCGCCTTTA
AAGGCTATCGATTTCGGGCTTTCCATCTTCTTCAAACCAGGTGAAATATTTTTGGATGTC
GTTGGAAGTCCTTATTATGTTGCCCCTGAGGTTCTGAAGAAACACTATGGCTGTGAGGTG
GATGTGTGGAGTGCCGGTGTAATAGTTTATATCTTATTGAGCGGGGTTCCTCCATTTTGG
GATGAATCTGAACGAGGGATATTTGAACAAGTTCTGAAAGGCGATCTTGATTTTTCATCT
GATCCCTGGCCCAGTATTTCAGAGAGTGCAAAGGATTTGGTCAGGAAGATGCTAAACCGT
GATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTCATCCCTGGGTTTGTGTAGAT
GGAGTGGCTCCTGACAAACCTCTGGATTCTGCTGTTTTAACCAGATTGAAACAGTTTTCT
GCAATGAATAAACTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTGTCCGAAGAT
GAAATTGCAGGATTGAGAGAAATGTTCAAAATGCTGGACACTGACAATAGTGGGCAGATC
ACGTTGGAGGAACTAAAAAGTGGTTTGAAGAGAATTGGTGCTAACTTAAAAGACTCTGAA
ATTACAACACTAATGGAGGCGGCAGATATTGATAACAGTGGTTCCATTGATTATGGAGAG
TTCCTAGCTGCAACTTTGCATCTGAACAAAGTTGAGCGAGAAGATAACCTCTTTGCAGCA
TTCTCATACTTTGATAAAGACAGCAGCGGTTACATAACTCATGATGAGCTACAAAAAGCA
TGTGAGGAATTTGGTATAGAAGATGCACACCTAGAAGATATCATCCGTGACATTGATCAA
GACAATGATGGCCGGATCGACTACAATGAGTTTGTAACAATGATGCAGAAGGGAAATAAT
CCACTAGGGAAAAAAGGGCACTACCAGATGAGCTTTGGTCTTAGAGAAGCATTGAAGCTT
GGCTAA

Peptide Sequence

PEP ID

EER98014
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:3931891:3937297:-1 gene:SORBI_3002G040800 transcript:EER98014 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGNTCVGPSTPSDRHSFFNTVSLAVLWRPPAAAAAAARAEPSPTTEPSSSTPSRAPDPVT
ISDSEHPPHSTSTSTASVPAAAPPNPNGKPKPKVKRVQSAGLLAGSVLRRDSERLKDLYT
LGKKLGQGQFGTTYQCVEKATGKHFACKSIAKRKLVNEEDVEDVRREIQIMHHLSGHPNV
VSIVGAYEDAVAVHLVMELCAGGELFDRIIQRGHYSEKAAAQLARVIIGAVEACHSLGVM
HRDLKPENFLFVNQKEDAPLKAIDFGLSIFFKPGEIFLDVVGSPYYVAPEVLKKHYGCEV
DVWSAGVIVYILLSGVPPFWDESERGIFEQVLKGDLDFSSDPWPSISESAKDLVRKMLNR
DPRKRLTAHEALCHPWVCVDGVAPDKPLDSAVLTRLKQFSAMNKLKKMALRVIAENLSED
EIAGLREMFKMLDTDNSGQITLEELKSGLKRIGANLKDSEITTLMEAADIDNSGSIDYGE
FLAATLHLNKVEREDNLFAAFSYFDKDSSGYITHDELQKACEEFGIEDAHLEDIIRDIDQ
DNDGRIDYNEFVTMMQKGNNPLGKKGHYQMSFGLREALKLG

Transcript Sequence

Transcript ID

EER98014
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:3931891:3937297:-1 gene:SORBI_3002G040800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGTCGGCTAGTCGGCCAGTCCCCACCAAATCCTCCATCGATCCAACCAATCCCTCGCCG
CCAAATGCCGCCACGGGCTGCCTAGGGTTCCGGCGGCCGCCGCCCCCTCGCCGGCGCGAT
GGGGAACACCTGCGTGGGCCCCAGCACCCCCTCGGACCGCCACAGCTTCTTCAACACCGT
CTCCCTCGCCGTGCTCTGGCGCCCCCCGGCCGCCGCCGCCGCCGCCGCCCGCGCCGAGCC
TTCCCCGACCACTGAACCCAGCTCCTCCACTCCCTCCAGGGCACCTGACCCCGTCACCAT
CTCCGACTCCGAGCACCCGCCACACTCCACCTCCACCTCCACCGCCTCAGTCCCGGCCGC
AGCGCCGCCCAATCCTAACGGCAAGCCCAAGCCCAAGGTGAAGCGCGTGCAGAGCGCGGG
CCTGCTCGCGGGCTCCGTGCTGAGGCGCGACTCCGAGCGGCTCAAGGACCTGTACACCCT
GGGCAAGAAGCTCGGGCAGGGGCAGTTCGGCACCACCTACCAGTGCGTCGAGAAGGCCAC
GGGGAAGCACTTCGCCTGCAAGTCCATCGCCAAGCGGAAGCTCGTCAACGAGGAGGACGT
TGAGGACGTGCGCCGCGAGATCCAGATCATGCACCACCTGTCCGGCCACCCCAACGTCGT
GTCCATCGTCGGAGCCTACGAGGACGCCGTCGCCGTGCACCTCGTCATGGAGCTGTGCGC
CGGAGGGGAGCTGTTCGATAGGATCATACAGCGCGGGCACTACTCTGAGAAAGCAGCCGC
ACAGTTGGCCCGGGTGATCATTGGGGCTGTAGAAGCATGCCATTCGCTCGGGGTGATGCA
CAGAGACCTCAAGCCAGAGAATTTCTTGTTTGTCAACCAAAAGGAGGATGCGCCTTTAAA
GGCTATCGATTTCGGGCTTTCCATCTTCTTCAAACCAGGTGAAATATTTTTGGATGTCGT
TGGAAGTCCTTATTATGTTGCCCCTGAGGTTCTGAAGAAACACTATGGCTGTGAGGTGGA
TGTGTGGAGTGCCGGTGTAATAGTTTATATCTTATTGAGCGGGGTTCCTCCATTTTGGGA
TGAATCTGAACGAGGGATATTTGAACAAGTTCTGAAAGGCGATCTTGATTTTTCATCTGA
TCCCTGGCCCAGTATTTCAGAGAGTGCAAAGGATTTGGTCAGGAAGATGCTAAACCGTGA
TCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTCATCCCTGGGTTTGTGTAGATGG
AGTGGCTCCTGACAAACCTCTGGATTCTGCTGTTTTAACCAGATTGAAACAGTTTTCTGC
AATGAATAAACTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTGTCCGAAGATGA
AATTGCAGGATTGAGAGAAATGTTCAAAATGCTGGACACTGACAATAGTGGGCAGATCAC
GTTGGAGGAACTAAAAAGTGGTTTGAAGAGAATTGGTGCTAACTTAAAAGACTCTGAAAT
TACAACACTAATGGAGGCGGCAGATATTGATAACAGTGGTTCCATTGATTATGGAGAGTT
CCTAGCTGCAACTTTGCATCTGAACAAAGTTGAGCGAGAAGATAACCTCTTTGCAGCATT
CTCATACTTTGATAAAGACAGCAGCGGTTACATAACTCATGATGAGCTACAAAAAGCATG
TGAGGAATTTGGTATAGAAGATGCACACCTAGAAGATATCATCCGTGACATTGATCAAGA
CAATGATGGCCGGATCGACTACAATGAGTTTGTAACAATGATGCAGAAGGGAAATAATCC
ACTAGGGAAAAAAGGGCACTACCAGATGAGCTTTGGTCTTAGAGAAGCATTGAAGCTTGG
CTAATGGTAACTGTGTGTTTTCCCTTTGCACTTTTCCTTTTTGTTCGCTTAGCAATCCAA
TATTCACATGAATTCTTGTGTTGCTGATTCCTGTTTCATGGATTATGCTCTGTGACACGC
CCTCACTCCACCGAATCATATGCTTACTGTTTTTTTTTTTGGGCTCTTCGCAGGTATGAT
CAATCCTGTGTAAAGTGCCATTCAGCTTTATATGCCAAACTATACTTGAGAAAACTAACT
TCGAGAATTTGGGACTCGGGTGCCAAAGGTGGAGCAAATGTGCGATAGGATTAGCTTCGA
GGTACCAACTGAGCAATGAGCACGTTGCATGCAGGAACTCAATGGTGATCTTTTTTTATA
TATATATTTCAAATGTTCATCTTCAAATACGGAGCCTCCTTAACCCACCACCATGTATAG
GCTTTTTTGAGGTGGGAAAGGAATGGCGGTTGTGTTTTCCTTGACCTTCTGAAGCTCAGT
TGCAGGATGCTCCTATATAGAGAGAAATGTTAGTCACATCACATCGCCTGTGCATACTGT
ATAGCGAAGCTTAACATGTAATATCGGACTATATGTGTGTGTGTGTTGTGTTTTTTTTCC
TTATTAGATAGATGTGCAGGCAGAGCCTTGTCATATATGTATTGCAAGAATAGGCTGGCT
ATTAATAAATGATTTTGTGTGTGTGTGTACATCTCAGTACTTGATAAGTGTGACTTTATT
CTTTTTAAAAAAATTATGAAGTGCAGCCTGATGGT