Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER97880
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:1279483:1285077:-1 gene:SORBI_3002G014400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTCGCCTTCGACGAGTTCGGGCGCCCCTTCATCATCCTGCGGGAGCAGGAGAAG
AAGACGCGACTGCGGGGGCTCGACGCGCAGAAGGCCAACATCGCCGCGGGCAAGGCCGTC
GCGCGGATCCTCCGCACCTCGCTCGGCCCCAAGGGCATGGACAAGATGCTCCAGTCCCCC
GACGGCGACGTCATCATCACAAATGATGGGGCAACCATCTTGGAGCAGATGGATGTTGAC
AACCAGATTGCGAAGCTGATGGTGGAGCTGTCCCGTAGTCAAGACTATGAAATCGGGGAT
GGTACTACCGGCGTGGTAGTCATGGCAGGGGCGCTCCTCGAGCAGGCTGAGAAGCTTCTG
GAACGTGGTATTCACCCCATTAGGGTGGCTGAAGGCTATGAGATGGCATCAAGGGTTGCT
TTTGATCACCTAGAACGTATATCCCAAAAGTTTGAGTTCACTGCTGACAACATTGAGCCC
CTGGTTCAGACATGCATGACAACTCTATCCTCAAAGATTGTCAACCGTTGCAAGCGGGCA
TTGGCAGAGATTGCTGTCAAAGCAGTTCTTGCGGTTGCAGATTTGGAGAGGAAGGATGTT
AACTTGGATTTAATTAAAGTAGAAGGCAAGGTTGGTGGGAAGCTGGAGGACACTGAGCTT
GTATATGGAATTATTGTTGACAAAGATATGAGCCATCCACAAATGCCAAAGAGAATTGAG
GATGCTAAGATTGCCATCCTGACTTGCCCATTTGAGCCTCCGAAGCCTAAGACAAAGCAT
AAGGTTGACATTGATACTGTCGAGAAATTCCAGACACTGCGTGAGCAAGAGCAGAAATAC
TTCGATGAAATGGTTCAGAAGTGCAAGGATGCTGGTGCAACCCTGGTTATTTGTCAGTGG
GGTTTTGATGATGAAGCCAATCATTTGTTGATGCACAGAAATCTGCCAGCTGTCAGATGG
GTTGGTGGTGTTGAATTGGAATTGATTGCCATTGCTACAGGAGGAAGGATTGTTCCTAGA
TTCCAAGAGTTGAGCCCTGAAAAGCTTGGGAAGGCTGGATTAGTCAGAGAAAAAGCATTT
GGAACAACAAAGGACCGGATGCTTTACATTGAGCAGTGTGCCAATTCCAGAGCTGTAACT
ATTTTCATTCGTGGTGGAAACAAAATGATGATTGAGGAGACCAAGCGTAGTCTTCATGAT
GCTCTTTGTGTGGCAAGGAATCTTATCCGGAATAACTCAATTGTGTACGGCGGTGGCTCA
GCAGAGATATCTTGTTCAATTGCTGTTGAAACTGCTGCAGATCGTCACCCTGGAGTTGAG
CAGTATGCTATCAGGTCATTTGCTGATGCATTAGATGCTGTTCCACTAGCCTTGGCTGAA
AACAGTGGTTTGTCACCAATTGATACCTTAACCGCAGTAAAAGCCCAACAAGTTAAGGAG
AGCAACCCCCACTGCGGTATAGACTGCAATGATGTTGGCACCAACGACATGAAAGAACAG
AACGTCTTCGAGACCCTTATTGGCAAGCAGCAACAGATCTTGCTTGCCACTCAGGTGGTG
AAGATGATCTTGAAGATCGACGATGTCATCTCACCGTCCGAGTACTGA

Peptide Sequence

PEP ID

EER97880
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:1279483:1285077:-1 gene:SORBI_3002G014400 transcript:EER97880 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALAFDEFGRPFIILREQEKKTRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSP
DGDVIITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAEKLL
ERGIHPIRVAEGYEMASRVAFDHLERISQKFEFTADNIEPLVQTCMTTLSSKIVNRCKRA
LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIE
DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLREQEQKYFDEMVQKCKDAGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGLVREKAF
GTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGS
AEISCSIAVETAADRHPGVEQYAIRSFADALDAVPLALAENSGLSPIDTLTAVKAQQVKE
SNPHCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY

Transcript Sequence

Transcript ID

EER97880
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:1279483:1285077:-1 gene:SORBI_3002G014400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTAGAACTAGAACAACCACCACACCACACCCCGCCTCCCTCCCCGCCCGCACTCCACCAC
CCGCGCCGCGCCGCCGCCTCTGACTCCGCCTCGGCCGCCTCGGATCCGGACCGAGCGCCG
GCGATGGCGCTCGCCTTCGACGAGTTCGGGCGCCCCTTCATCATCCTGCGGGAGCAGGAG
AAGAAGACGCGACTGCGGGGGCTCGACGCGCAGAAGGCCAACATCGCCGCGGGCAAGGCC
GTCGCGCGGATCCTCCGCACCTCGCTCGGCCCCAAGGGCATGGACAAGATGCTCCAGTCC
CCCGACGGCGACGTCATCATCACAAATGATGGGGCAACCATCTTGGAGCAGATGGATGTT
GACAACCAGATTGCGAAGCTGATGGTGGAGCTGTCCCGTAGTCAAGACTATGAAATCGGG
GATGGTACTACCGGCGTGGTAGTCATGGCAGGGGCGCTCCTCGAGCAGGCTGAGAAGCTT
CTGGAACGTGGTATTCACCCCATTAGGGTGGCTGAAGGCTATGAGATGGCATCAAGGGTT
GCTTTTGATCACCTAGAACGTATATCCCAAAAGTTTGAGTTCACTGCTGACAACATTGAG
CCCCTGGTTCAGACATGCATGACAACTCTATCCTCAAAGATTGTCAACCGTTGCAAGCGG
GCATTGGCAGAGATTGCTGTCAAAGCAGTTCTTGCGGTTGCAGATTTGGAGAGGAAGGAT
GTTAACTTGGATTTAATTAAAGTAGAAGGCAAGGTTGGTGGGAAGCTGGAGGACACTGAG
CTTGTATATGGAATTATTGTTGACAAAGATATGAGCCATCCACAAATGCCAAAGAGAATT
GAGGATGCTAAGATTGCCATCCTGACTTGCCCATTTGAGCCTCCGAAGCCTAAGACAAAG
CATAAGGTTGACATTGATACTGTCGAGAAATTCCAGACACTGCGTGAGCAAGAGCAGAAA
TACTTCGATGAAATGGTTCAGAAGTGCAAGGATGCTGGTGCAACCCTGGTTATTTGTCAG
TGGGGTTTTGATGATGAAGCCAATCATTTGTTGATGCACAGAAATCTGCCAGCTGTCAGA
TGGGTTGGTGGTGTTGAATTGGAATTGATTGCCATTGCTACAGGAGGAAGGATTGTTCCT
AGATTCCAAGAGTTGAGCCCTGAAAAGCTTGGGAAGGCTGGATTAGTCAGAGAAAAAGCA
TTTGGAACAACAAAGGACCGGATGCTTTACATTGAGCAGTGTGCCAATTCCAGAGCTGTA
ACTATTTTCATTCGTGGTGGAAACAAAATGATGATTGAGGAGACCAAGCGTAGTCTTCAT
GATGCTCTTTGTGTGGCAAGGAATCTTATCCGGAATAACTCAATTGTGTACGGCGGTGGC
TCAGCAGAGATATCTTGTTCAATTGCTGTTGAAACTGCTGCAGATCGTCACCCTGGAGTT
GAGCAGTATGCTATCAGGTCATTTGCTGATGCATTAGATGCTGTTCCACTAGCCTTGGCT
GAAAACAGTGGTTTGTCACCAATTGATACCTTAACCGCAGTAAAAGCCCAACAAGTTAAG
GAGAGCAACCCCCACTGCGGTATAGACTGCAATGATGTTGGCACCAACGACATGAAAGAA
CAGAACGTCTTCGAGACCCTTATTGGCAAGCAGCAACAGATCTTGCTTGCCACTCAGGTG
GTGAAGATGATCTTGAAGATCGACGATGTCATCTCACCGTCCGAGTACTGACGAAGTCTG
AAGGAAAAAGGAAGGGATGGCTATGCTGGATGACAGTTCAGTAGGCAGCATTGCTGATGT
GACATTGGTGTACTCCGTATCCAGGCTTGCTCCATGTATCTCGTGAGCTGCCTGCCTGCC
TACCACTTTTTGTGTGACCGTTTGTGGAAATTGTTTGTATTTCACGATGAGTATGCGTAT
GGATGTAGTCTAGACTCTAGACAACAAGTTTTTTGTGATGGTTGCAGTATTGATACTTTT
GTAGTGTTTTCGCCACTTGGCTGAAGCTATCTTTTTTGTTTGATGCATGGATGCAATAGT
TCGACGCCCTCATCAACAAAATGCAATAGTTCGTCTTCTGGTTT