Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER97871
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:1220641:1223299:-1 gene:SORBI_3002G013700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGTCCGCCGGCCTACACCGCCTCCCCCTGCACGGGTTCCGCTCTCTTCTCCAACTCC
CGAGCGCCGCCGCCGCGTCTTCTTCTCCAGCGTGGCCCGGGGGCGCCGTCGTCCGCGGGG
CGGCACGGCGGCCGCGTTGCCCCGTCGCAGGAGAGGCGCCGCCCCGCCCCGGCGCAGGAG
AAGCGCCGCCCCTCGGAGTCGTCGTCCCGGACCCAGCTCCCGGAGCGGAAGCGGCACTGG
AAGGCGGGAGAGTTCCCGGGGACCGCTACTGCCGATGGGGGTGGCGGCGGACGGCTCCCC
GCGCAGGGGAAGCGGCATTCCAAGGCCGGGGAGTTCCCCGGGACGGACGACGGCGGCCGC
CCCGCCCCCGCGCTGCCACAGGGGAAGCGACATTGGAAGGCCGGCGAGTTCCCGGGAATT
GCCGTTGCCCCCGGTTCTGGGACGCCGAGGACTCCCCTCAAGAACGTCAAGAAGCGGCTG
GACGCCCGCGCGGAAGCCAAGGCGTGGGCATGCACCGTCACCGAAGCCCTCGCCGACCGT
GTCACATCCAAGAATTGGCAAGAGGCGCTTCAGGTGTTTGAGATGCTCAAGGAACAACCG
TTCTACCATCCCAAAGAGGGCACCTTCATGAAGCTCATTGTGCTGCTCGGCCGCTCAGGG
CAGCCTGCCCGAGCGCACCAACTCTTCGACGAGATGTTGCAACAAGGATGCCAGCCCACC
CCTGGGCTTTACACCGCCTTAATTGGGGCCTACTGCCGCAGCGGTCTACTGGATGATGCG
CTCCAGCTCCTCAATGACATGAAGGGCTCACCGTTGTGCCAGCCTGATGTCTACACCTAC
AGCACCATCATCAAGGCCTGTGTTGATGCCACAAGGTTTGACCTCATCGATGTTATGTAC
AAAGACATGGCTGAGCGCTCTATAGCGCCCAACACGGTCACGCAGAATATTGTCCTCAGT
GGCTATGGAAAAGCTGGACGGTTGGATGACATGGAGAAGGTGCTCTCTGATATGCTCGAC
AGCACAGCCTGCAAACCGGATGTCTGGACCATGAACATTATCTTAAGCCTGTTTGGAAAC
AAGGGCCAGGTTGAATTGATGGAAAAATGGTATGAGAAATTCCGAAGCTACGGGATCGAA
CCAGAGACTCGCACACTGAACATCCTGATTGGTGCCTATGGGAAGAAGCGGATGTATGAT
AAGATGTCTGCAGTCATGGAGTACATGCGCAAGCTTGCGTTCCCATGGACAACCGCGACA
TACAACAATGTGATTGAGGCATTTGCCGAGGCGGGTGATGCCAAAAACATGGAGCACACA
TTTAACCAGATGCGCTCTGAGGGTATGAAGCCAGATACAAAGACCTTCTGCTGTCTAATA
AATGGGTTTAGCAAAGCAGGCCAATTCCATAAGGTGGTGGGCATGGTTAAGCTTGCTGAG
AGGCTTGATGTGCCTGCAAATACATCTTTTCACAATGCTATTCTTGGTGCATGTGCAAGA
GCAGATGATCTTATGGAGATGGAGAGGGTCTTCAGGCACATGAAGCATACACAGTGTGAT
CCCGATGCTGTGACATACTCTATCTTGGTGGAAGCTTATCGCAAGGAAGGAATGACCGAT
AAGATTTATGCTTTGCATCAGGAGAACCCAGCTTTGGTTCCGACTGATTTTGTCATGGTT
TAA

Peptide Sequence

PEP ID

EER97871
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:1220641:1223299:-1 gene:SORBI_3002G013700 transcript:EER97871 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSPPAYTASPCTGSALFSNSRAPPPRLLLQRGPGAPSSAGRHGGRVAPSQERRRPAPAQE
KRRPSESSSRTQLPERKRHWKAGEFPGTATADGGGGGRLPAQGKRHSKAGEFPGTDDGGR
PAPALPQGKRHWKAGEFPGIAVAPGSGTPRTPLKNVKKRLDARAEAKAWACTVTEALADR
VTSKNWQEALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPT
PGLYTALIGAYCRSGLLDDALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMY
KDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKPDVWTMNIILSLFGN
KGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTAT
YNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAE
RLDVPANTSFHNAILGACARADDLMEMERVFRHMKHTQCDPDAVTYSILVEAYRKEGMTD
KIYALHQENPALVPTDFVMV

Transcript Sequence

Transcript ID

EER97871
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:1220641:1223299:-1 gene:SORBI_3002G013700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGTCCGCCGGCCTACACCGCCTCCCCCTGCACGGGTTCCGCTCTCTTCTCCAACTCC
CGAGCGCCGCCGCCGCGTCTTCTTCTCCAGCGTGGCCCGGGGGCGCCGTCGTCCGCGGGG
CGGCACGGCGGCCGCGTTGCCCCGTCGCAGGAGAGGCGCCGCCCCGCCCCGGCGCAGGAG
AAGCGCCGCCCCTCGGAGTCGTCGTCCCGGACCCAGCTCCCGGAGCGGAAGCGGCACTGG
AAGGCGGGAGAGTTCCCGGGGACCGCTACTGCCGATGGGGGTGGCGGCGGACGGCTCCCC
GCGCAGGGGAAGCGGCATTCCAAGGCCGGGGAGTTCCCCGGGACGGACGACGGCGGCCGC
CCCGCCCCCGCGCTGCCACAGGGGAAGCGACATTGGAAGGCCGGCGAGTTCCCGGGAATT
GCCGTTGCCCCCGGTTCTGGGACGCCGAGGACTCCCCTCAAGAACGTCAAGAAGCGGCTG
GACGCCCGCGCGGAAGCCAAGGCGTGGGCATGCACCGTCACCGAAGCCCTCGCCGACCGT
GTCACATCCAAGAATTGGCAAGAGGCGCTTCAGGTGTTTGAGATGCTCAAGGAACAACCG
TTCTACCATCCCAAAGAGGGCACCTTCATGAAGCTCATTGTGCTGCTCGGCCGCTCAGGG
CAGCCTGCCCGAGCGCACCAACTCTTCGACGAGATGTTGCAACAAGGATGCCAGCCCACC
CCTGGGCTTTACACCGCCTTAATTGGGGCCTACTGCCGCAGCGGTCTACTGGATGATGCG
CTCCAGCTCCTCAATGACATGAAGGGCTCACCGTTGTGCCAGCCTGATGTCTACACCTAC
AGCACCATCATCAAGGCCTGTGTTGATGCCACAAGGTTTGACCTCATCGATGTTATGTAC
AAAGACATGGCTGAGCGCTCTATAGCGCCCAACACGGTCACGCAGAATATTGTCCTCAGT
GGCTATGGAAAAGCTGGACGGTTGGATGACATGGAGAAGGTGCTCTCTGATATGCTCGAC
AGCACAGCCTGCAAACCGGATGTCTGGACCATGAACATTATCTTAAGCCTGTTTGGAAAC
AAGGGCCAGGTTGAATTGATGGAAAAATGGTATGAGAAATTCCGAAGCTACGGGATCGAA
CCAGAGACTCGCACACTGAACATCCTGATTGGTGCCTATGGGAAGAAGCGGATGTATGAT
AAGATGTCTGCAGTCATGGAGTACATGCGCAAGCTTGCGTTCCCATGGACAACCGCGACA
TACAACAATGTGATTGAGGCATTTGCCGAGGCGGGTGATGCCAAAAACATGGAGCACACA
TTTAACCAGATGCGCTCTGAGGGTATGAAGCCAGATACAAAGACCTTCTGCTGTCTAATA
AATGGGTTTAGCAAAGCAGGCCAATTCCATAAGGTGGTGGGCATGGTTAAGCTTGCTGAG
AGGCTTGATGTGCCTGCAAATACATCTTTTCACAATGCTATTCTTGGTGCATGTGCAAGA
GCAGATGATCTTATGGAGATGGAGAGGGTCTTCAGGCACATGAAGCATACACAGTGTGAT
CCCGATGCTGTGACATACTCTATCTTGGTGGAAGCTTATCGCAAGGAAGGAATGACCGAT
AAGATTTATGCTTTGCATCAGGAGAACCCAGCTTTGGTTCCGACTGATTTTGTCATGGTT
TAACTGACCCACTGACTGAATCGCGGTCCAGAAATGTTAAATCCTGGTTGCATTGGTTGA
GAATCTTCTTGCTATCCACGTTTTGGAATTGATAATGCTACCAAGCAGAGTGGCAACCAT
TCTCCAACTCCATTTTTTGTCTGTTGTCCTGCAGAGTTAGTATAGAGTATAGATGTCTCC
TCCAACTCAAGGGGTTTTCAGCGAGATGTACCCACGAACCACAGTATGTATAACTCAGAT
CAGATACAAGGAGTTATAAGGCTCTGAAAGTGCCTCAGCAAGATTCTGTCCAGTTTGAGT
TGCCAAGTATTTGAAAACAGAGGGAGTTTACTGAACTGATGAATGGGAACCAAATTGTAT
GTTTATCCTGCACTATGGCACTGTTAATCCTGTTCTTGACAAGACAGGGGTTTGGGAGAA
TAAAAGAATTCCTATTCCGATGGTAAAGCTTTCTGTCGCCGTACTCTGTACCAGATTACT
TTCCTATGCCCAAATTCTTTCAGATCAATAGTTGGAACTTTTTCACATCTTTTTCATCAA
TATATAGCCATGACTTCTAGTATGTTGCACATGTACTGAACTTGGAATATGTGTACAAAA
GGGTAGGCATTAAGTTTTCTCTAGCACCCTTAAAGTGTAGTTTAGTGATCATGTGTATTT
CACCAAACAGTATGTTAAGGTAGTGGATAAAATTTGATTTGTCAGATTCCACACTCTACA
GGTGATATGTTGCCAACCCTGTAGCCAAGTGATAGATCATAAGGTTTTGAAATTTTGATG
GTTGAGATCATCGATTTGGGATGACAT