Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER97762
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:77077923:77083703:1 gene:SORBI_3002G423500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGCTCCGTGTGCTGAACCCTAACGCCCAGGTGCTCAACAAGTCGGAGGCGCTGCAC
ATGACCATCAACGCCGCCAAGGGCCTCCAGGACGTGCTCAAGACCAACCTCGGCCCCAAG
GGCACCATCAAGATGCTTGTGGGTGGAGCTGGTGACCTGAAGCTGACTAAGGATGGGAAC
ACCCTCTTGAAGGAAATGCAAATTCAGAACCCAACTGCAATCATGATTGCAAGGACGGCT
GTGGCACAGGATGACACAAGTGGTGATGGCACAACCTCCACTGTGCTTTTTATTGGGGAG
CTAATGAAGCAGTCTGAGCGGTGCATAGATGAAGGTACTCATCCAAGATTCTTGGTCGAT
GGTTTTGATGTTGCTAAGAGAGCATGTCTTGATTTTCTTGAAAAGTTCAAGACGCCAGTC
GTTATTGGTGAAGAACCGGACAGAGACACCTTGAAAATGATAGCAAGAACAACTCTTAGG
ACGAAGTTGTATGAAGGATTGGCTGATCAGTTGACGGATATTGTTGTGAATGCAGTTCTG
TGCATCAGCAAACCAGATGAACCAATCGATCTTTTTATGGTGGAAATAATGCACATGCGC
CACAAATTTGATGTTGACACCCGCCTGGTTGAAGGTCTGGTCCTGGACCACGGTTCTCGT
CACCCTGACATGAAGCGCAGGGCAGAGAACTGTTACATCTTGACCTGCAATGTCTCATTA
GAATATGAGAAAAGTGAAATCAATGCAGGATTTTTTTACTCAAATGCAGAACAAAGGGAG
AAGATGGTTGCTGCAGAGAGACGCCAAGTTGATGAACGTGTCAAACGGATTATTGAGTTG
AAAAATAAGGTTTGTGCTGGAGGTGATAAAAACTTTGTTGTGATAAATCAGAAGGGCATT
GACCCTCCATCTCTGGATCTCCTTGCTAGAGCTGGGATAATTGCTCTCCGAAGAGCAAAG
AGGAGAAATATGGAGAGGCTTGTGCTAGCATGCGGTGGTGAAGCTGTCAATTCCGTTGAT
GACTTGACTGAAGATTGTCTAGGCTGGGCTGGTCTTGTCTATGAGCATGTTCTTGGAGAA
GAAAAGTACACTTTTGTGGAGAATGTGAAAAACCCACGCTCTTGTACCATACTGATTAAA
GGACCTAATGACCATACCATCGCACAAATCAAGGATGCTGTCCGTGATGGTCTAAGATCT
GTTAAGAACACAATTGAGGATGAAGCAGTTGTGCTGGGTGCTGGTGCTTTTGAGGTTGCG
GCAAAGAAGCATCTTATTGACAACGTGAAGAAAACCGTCAAAGGACGAGCACAACTTGGG
GTGGAGGCGTTTGCAGAAGCTCTTCTTGTTATACCCAAGACTTTAGCTGAAAACTCTGGT
TTAGATACCCAAGATGTGATTGTTTCTCTCCAGAACGAGCATGACCGTGGATTAGTTGTG
GGATTGAACCATCACTCTGGGGAACCGATTGATCCCCAGATGGAAGGCATCTTTGATAAT
TACTCTGTGAAACGCCAGATCATCAACTCTGGACCCATCATTGCATCTCAATTGCTGCTT
GTGGATGAAGTGATCAGAGCAGGCCGCAACATGAGGAAACCGACTTAG

Peptide Sequence

PEP ID

EER97762
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:77077923:77083703:1 gene:SORBI_3002G423500 transcript:EER97762 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLRVLNPNAQVLNKSEALHMTINAAKGLQDVLKTNLGPKGTIKMLVGGAGDLKLTKDGN
TLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVD
GFDVAKRACLDFLEKFKTPVVIGEEPDRDTLKMIARTTLRTKLYEGLADQLTDIVVNAVL
CISKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSL
EYEKSEINAGFFYSNAEQREKMVAAERRQVDERVKRIIELKNKVCAGGDKNFVVINQKGI
DPPSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTEDCLGWAGLVYEHVLGE
EKYTFVENVKNPRSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTIEDEAVVLGAGAFEVA
AKKHLIDNVKKTVKGRAQLGVEAFAEALLVIPKTLAENSGLDTQDVIVSLQNEHDRGLVV
GLNHHSGEPIDPQMEGIFDNYSVKRQIINSGPIIASQLLLVDEVIRAGRNMRKPT

Transcript Sequence

Transcript ID

EER97762
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:77077923:77083703:1 gene:SORBI_3002G423500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCGCACTCGCCCAAAACCCTACTGCTCCCGCTCCGCTCCGCCCCGCCCCGCCCCGCCCC
GCCCCTGCTTGGCCTGGCCCTGTGGTTCCTAACACTAACACCAACTCGCCGCCGCCGCCG
CCGCCGGCGAGATCTCCGGGTGGAGCAAACGAGGCAAGGCAGCAGCCATGTCGCTCCGTG
TGCTGAACCCTAACGCCCAGGTGCTCAACAAGTCGGAGGCGCTGCACATGACCATCAACG
CCGCCAAGGGCCTCCAGGACGTGCTCAAGACCAACCTCGGCCCCAAGGGCACCATCAAGA
TGCTTGTGGGTGGAGCTGGTGACCTGAAGCTGACTAAGGATGGGAACACCCTCTTGAAGG
AAATGCAAATTCAGAACCCAACTGCAATCATGATTGCAAGGACGGCTGTGGCACAGGATG
ACACAAGTGGTGATGGCACAACCTCCACTGTGCTTTTTATTGGGGAGCTAATGAAGCAGT
CTGAGCGGTGCATAGATGAAGGTACTCATCCAAGATTCTTGGTCGATGGTTTTGATGTTG
CTAAGAGAGCATGTCTTGATTTTCTTGAAAAGTTCAAGACGCCAGTCGTTATTGGTGAAG
AACCGGACAGAGACACCTTGAAAATGATAGCAAGAACAACTCTTAGGACGAAGTTGTATG
AAGGATTGGCTGATCAGTTGACGGATATTGTTGTGAATGCAGTTCTGTGCATCAGCAAAC
CAGATGAACCAATCGATCTTTTTATGGTGGAAATAATGCACATGCGCCACAAATTTGATG
TTGACACCCGCCTGGTTGAAGGTCTGGTCCTGGACCACGGTTCTCGTCACCCTGACATGA
AGCGCAGGGCAGAGAACTGTTACATCTTGACCTGCAATGTCTCATTAGAATATGAGAAAA
GTGAAATCAATGCAGGATTTTTTTACTCAAATGCAGAACAAAGGGAGAAGATGGTTGCTG
CAGAGAGACGCCAAGTTGATGAACGTGTCAAACGGATTATTGAGTTGAAAAATAAGGTTT
GTGCTGGAGGTGATAAAAACTTTGTTGTGATAAATCAGAAGGGCATTGACCCTCCATCTC
TGGATCTCCTTGCTAGAGCTGGGATAATTGCTCTCCGAAGAGCAAAGAGGAGAAATATGG
AGAGGCTTGTGCTAGCATGCGGTGGTGAAGCTGTCAATTCCGTTGATGACTTGACTGAAG
ATTGTCTAGGCTGGGCTGGTCTTGTCTATGAGCATGTTCTTGGAGAAGAAAAGTACACTT
TTGTGGAGAATGTGAAAAACCCACGCTCTTGTACCATACTGATTAAAGGACCTAATGACC
ATACCATCGCACAAATCAAGGATGCTGTCCGTGATGGTCTAAGATCTGTTAAGAACACAA
TTGAGGATGAAGCAGTTGTGCTGGGTGCTGGTGCTTTTGAGGTTGCGGCAAAGAAGCATC
TTATTGACAACGTGAAGAAAACCGTCAAAGGACGAGCACAACTTGGGGTGGAGGCGTTTG
CAGAAGCTCTTCTTGTTATACCCAAGACTTTAGCTGAAAACTCTGGTTTAGATACCCAAG
ATGTGATTGTTTCTCTCCAGAACGAGCATGACCGTGGATTAGTTGTGGGATTGAACCATC
ACTCTGGGGAACCGATTGATCCCCAGATGGAAGGCATCTTTGATAATTACTCTGTGAAAC
GCCAGATCATCAACTCTGGACCCATCATTGCATCTCAATTGCTGCTTGTGGATGAAGTGA
TCAGAGCAGGCCGCAACATGAGGAAACCGACTTAGATGTTTGTTGGCACCGAGCGTCCGA
GCCGATACTAATTTGTTGTACCTTTTGTTTTTGTTTTGTGCTTAGTAGTGATCTGGATGA
TACATTTATGGCTTCAGTTAGGCCCATTTCACGAAGCAGGTTGCATTCTCTGTCACTTGT
GCCCTGAACCGTTGCCTGGAATTTTGGATTGCTGCGTGCTTATATTTCAAGATGAGATTT
TAGTTTTATCGATGGTCTGCACTTTTTGCGGCATACATTCTCCTAGGAACTCGGTGTATG
TGATAATCTAGGCTATGGCTCCAATTGTGACAATGACAGACCATGTGCATGTAAGCGCGC
TACCTATGAAACTGGGTGTAAGCGCGCTAAGATTGCTTTAGCAATTTATTCTTATCTAGC
GAAAATTATCTTCAGTCATGGACCTATTGTATGTCTATGCATGTGTATGTAC