Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER97421
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:71356606:71361828:1 gene:SORBI_3002G348600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCACGGGAGCGGCGACTACGCGTCCTCCGCCCCCTCCGGCCACTACTACCAGCAC
CAGTACGCGCCCCCCGGCTCCAACCCCTATCCAGCCGCCACCGACGCCCCGGCGCCGGGT
GCAGTGGCGGGGGGCTACGCCTCCGCACCGCCCTACTCTCTCGGCGGCGGCTACCCCGAC
CAGCCGCCCTCCGCCCCGGCCTACTCGCAACCACCCTCCGCCCCGGCTTACTCGCAGCCG
CCGCCCCAGCCCCAGCACGGCGCCGGGTACACGCCTTACAACACCAACCCCACGACCTAC
CCGCCGGAGGCGTATTACTCCTACACGCCGCCGCCCACCCAGACCACGGCCCCGCCGCCT
GCGGAGCCCAACCCCGTGCCGCTGCCCTACGACGCCCCGTACTACGGGGGCGGGTACCAG
CCGCCGGCCACGGGGTACGACAACGAGGATTACCTGAACGAGGGCGCGTACGCGTACAGC
GGCGGCCGTGGCTCGGAGCCGTACGGGGCGCGCGGCACGGCCCCTGCGCGGTCGGGATCG
GCGCTGTTTGATGACTATGGGCGGTCGATCAGTGCCCCATCTGATGACTATGGGCGATCG
ATCAGTGCCCAATCTGGATGGGAGGAGCAATCGTGGGGCAGTGGTGGTGGTGGCGGAGGG
GGTGGGAGCTATGGGGTGATCGCAAAGGCCCTTCCTAAGGCGGAAACACATGAGGATGCG
AGTGGTGGTGCACAGAAGTTTCGGGTTAAGCTGCTGCCAGAGGGTGTTGGGAACCCTACT
GATGTGCTTTGCCAGATTGGTCTAGATGGAATTCGCATGCTTGATCCGAGTACAGGCAGG
ACCCTAAGGATTTATCCACTCGATTCACTGACAAGATGGGAGGTTTTGGATGCATCTATA
TTTGCATTCTGGGCGAAGACATCAGTGGATGTTGAACCAAAGAGAATTAGGCTGAAGTCA
AGCAGTTATACTTCCAATACTATGCTTGACACTGTGACAGCAGCAACAGTGCAGTTTAAG
GAGATAGGTGGAGATGCAAGAAGCAAAGGAGCAGTGGAAACTGGCAAGCCTTCAGTACAA
TCAAATGAGAAAAAGAAAGGTTTTGATTGGATGTTTACAAAACCTGTTGATGAAGTGAAA
GACCATTGGGTCCCAGATGAGGTTGCCAAGAAGTGTCACTCGTGCGCCGTTGATTTTAGC
CCTTTCAATCGCAGGCATCATTGTCGGAACTGTGGTGAAATCTTTTGTGATAAATGCAGT
CAGGGAAGAATTGCTCTGACAGCTGAGGATAATGCTCCACTTGTCAGAGTTTGTGATAGA
TGCATGGCCGAGGTCACTCAAAGGCTTAGCATTGCTAAGGAAGCTGCCAACAGATCTGCA
ACTGTGCAAAGTCATGAAGATCTTGCAAGAAAACTGAAGGAGGAAATGGAGAAAAACCGC
AAGTCTTCAGGTCCAGCATCTGGTGGTGGTTCATCTGGTACCAGAATGAGGGAAGTCGCG
TGCCCTACCTGCACAGTCCATCTTCAGGTTCAGGTTCCAACATCTGGCTCAGAGACAGTG
GAGTGTGGAGTGTGCCAGCATGCCTTCCTTGTCAGCGCCAATTGA

Peptide Sequence

PEP ID

EER97421
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:71356606:71361828:1 gene:SORBI_3002G348600 transcript:EER97421 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQHGSGDYASSAPSGHYYQHQYAPPGSNPYPAATDAPAPGAVAGGYASAPPYSLGGGYPD
QPPSAPAYSQPPSAPAYSQPPPQPQHGAGYTPYNTNPTTYPPEAYYSYTPPPTQTTAPPP
AEPNPVPLPYDAPYYGGGYQPPATGYDNEDYLNEGAYAYSGGRGSEPYGARGTAPARSGS
ALFDDYGRSISAPSDDYGRSISAQSGWEEQSWGSGGGGGGGGSYGVIAKALPKAETHEDA
SGGAQKFRVKLLPEGVGNPTDVLCQIGLDGIRMLDPSTGRTLRIYPLDSLTRWEVLDASI
FAFWAKTSVDVEPKRIRLKSSSYTSNTMLDTVTAATVQFKEIGGDARSKGAVETGKPSVQ
SNEKKKGFDWMFTKPVDEVKDHWVPDEVAKKCHSCAVDFSPFNRRHHCRNCGEIFCDKCS
QGRIALTAEDNAPLVRVCDRCMAEVTQRLSIAKEAANRSATVQSHEDLARKLKEEMEKNR
KSSGPASGGGSSGTRMREVACPTCTVHLQVQVPTSGSETVECGVCQHAFLVSAN

Transcript Sequence

Transcript ID

EER97421
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:71356606:71361828:1 gene:SORBI_3002G348600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGTCTCGAAGCAACCCCACCTTCTCTTCTTTTTTCCGCCTTCCTTTCCCCGTGCAACAAA
CGCAAACGCGAACGCGACCCAACGAATCGAATCAAATTCGCCGTCCACCTCGTCGGCGTC
GGCGCCACCGGCCTCGAGCCCAAGCCCCCGTCGTCCGATCAGGCAGCCGAGATGCAGCAC
GGGAGCGGCGACTACGCGTCCTCCGCCCCCTCCGGCCACTACTACCAGCACCAGTACGCG
CCCCCCGGCTCCAACCCCTATCCAGCCGCCACCGACGCCCCGGCGCCGGGTGCAGTGGCG
GGGGGCTACGCCTCCGCACCGCCCTACTCTCTCGGCGGCGGCTACCCCGACCAGCCGCCC
TCCGCCCCGGCCTACTCGCAACCACCCTCCGCCCCGGCTTACTCGCAGCCGCCGCCCCAG
CCCCAGCACGGCGCCGGGTACACGCCTTACAACACCAACCCCACGACCTACCCGCCGGAG
GCGTATTACTCCTACACGCCGCCGCCCACCCAGACCACGGCCCCGCCGCCTGCGGAGCCC
AACCCCGTGCCGCTGCCCTACGACGCCCCGTACTACGGGGGCGGGTACCAGCCGCCGGCC
ACGGGGTACGACAACGAGGATTACCTGAACGAGGGCGCGTACGCGTACAGCGGCGGCCGT
GGCTCGGAGCCGTACGGGGCGCGCGGCACGGCCCCTGCGCGGTCGGGATCGGCGCTGTTT
GATGACTATGGGCGGTCGATCAGTGCCCCATCTGATGACTATGGGCGATCGATCAGTGCC
CAATCTGGATGGGAGGAGCAATCGTGGGGCAGTGGTGGTGGTGGCGGAGGGGGTGGGAGC
TATGGGGTGATCGCAAAGGCCCTTCCTAAGGCGGAAACACATGAGGATGCGAGTGGTGGT
GCACAGAAGTTTCGGGTTAAGCTGCTGCCAGAGGGTGTTGGGAACCCTACTGATGTGCTT
TGCCAGATTGGTCTAGATGGAATTCGCATGCTTGATCCGAGTACAGGCAGGACCCTAAGG
ATTTATCCACTCGATTCACTGACAAGATGGGAGGTTTTGGATGCATCTATATTTGCATTC
TGGGCGAAGACATCAGTGGATGTTGAACCAAAGAGAATTAGGCTGAAGTCAAGCAGTTAT
ACTTCCAATACTATGCTTGACACTGTGACAGCAGCAACAGTGCAGTTTAAGGAGATAGGT
GGAGATGCAAGAAGCAAAGGAGCAGTGGAAACTGGCAAGCCTTCAGTACAATCAAATGAG
AAAAAGAAAGGTTTTGATTGGATGTTTACAAAACCTGTTGATGAAGTGAAAGACCATTGG
GTCCCAGATGAGGTTGCCAAGAAGTGTCACTCGTGCGCCGTTGATTTTAGCCCTTTCAAT
CGCAGGCATCATTGTCGGAACTGTGGTGAAATCTTTTGTGATAAATGCAGTCAGGGAAGA
ATTGCTCTGACAGCTGAGGATAATGCTCCACTTGTCAGAGTTTGTGATAGATGCATGGCC
GAGGTCACTCAAAGGCTTAGCATTGCTAAGGAAGCTGCCAACAGATCTGCAACTGTGCAA
AGTCATGAAGATCTTGCAAGAAAACTGAAGGAGGAAATGGAGAAAAACCGCAAGTCTTCA
GGTCCAGCATCTGGTGGTGGTTCATCTGGTACCAGAATGAGGGAAGTCGCGTGCCCTACC
TGCACAGTCCATCTTCAGGTTCAGGTTCCAACATCTGGCTCAGAGACAGTGGAGTGTGGA
GTGTGCCAGCATGCCTTCCTTGTCAGCGCCAATTGATACACCGGGGAGACAGTGCATGCT
ATAGAAATTATTCTGTTGATAACTATTCCTTTTTTTTTTGTTATGCTGTATACATAATAA
GTGTGTGTTGTGTCAGCCTGTACATGTTTCTTTGATTGTGTTGGTGATCACGGTTAGGAT
GTCTCTTTTTCCCCTGTACATGGGTGAATTCCAATTCGGGAGTATTGCAATGCTGGATGT
ATGCAGAGAATACCATTAGATTATAACCGGTGGAGCCTGAAGAGTGAAGGTTGTGCTCAT
GCACGCGTGTGACGTCCGCATTATGCCTGTTCGAAGTTCTATCATGCTGCTTCTTT