Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER97090
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:65842700:65852196:1 gene:SORBI_3002G275700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCAATAATAGTGACCCAATCCCGGATCAGCTGGGGGAAGGAGGGGCGGGCGTG
AAGCACGAAACAGGGGAGGAGGTGGGGGAGGAGACGTCTTCTTCCGCGGCGCAGGCGACC
GCGACGACGATGCTGCCCCGGTCGAGCTCGCGGCCGCAGCTGGACCTCAGCGGCGCCGCG
ATCCACGGGACGCTGGAGGACCGCAACCCTACCATCCTGCTTCCCAACCAATCCGACGAC
ATCTCCCACCTCGCCCTTGACATCGGCGGATCTCTTATAAAACTGGTATACTTCTCGCGA
CATGCTGAGCTTTCCACTGAAGATAAGCGCAAGATATCCACAAAGAGAAAACTTGGGATG
TTTAATGGTGGCAGGAGAAGCTACCCGATTCTTGGAGGGAGGCTCCACTTTGTCAAATTC
GAGACTGGGAAGCTAAATGAATGTTTGGATTTCATTTCTTCCAAACAACTACATCGTGGT
GGAATTGATTCACCTTCGTGGCGCTCGGGAGCTCAGCCTGATGACATTGTAATTAAGGCA
ACAGGTGGTGGAGCATACAAGTATGCAGATGTCTTCAAGGAAAGATTGGGAGTCAGCCTT
GAAAAGGAAGATGAAATGGACTGTCTTGTGGCTGGAGCAAACTTTTTGCTTAAGGCTATA
CGTCATGAAGCTTTTACACACATGGATGGTCAGAAGCGATATGTTCAGATTGATCAGAAT
GACTTGTTTCCCTTCCTTCTTGTTAATATCGGATCTGGTGTTAGTATAATCAAGGTTGAC
GGGCATGGGGAATTTCAGCGAGTAAGTGGGACAAATGTTGGTGGTGGTACGTACTGGGGA
TTGGGGAAGCTAATGACAAAGTGCAAGAGTTTTGATGAGTTGCTAGAGTTGAGCCAGCGT
GGAGACAACAGCACCATGGACATGCTTATAGGAGACATATATGGTGGTCTGGACTACTCC
AAGATTGGTCTTTCAGCATCTACAATCGCCTCTAGTTTTGGAAAGATAATTTCAGAAAAC
AAAGAGCTATCAGATTATAGACCTGAGGATATATCGCTCTCCTTGTTACGGATGATTTCA
TACAACATTGGCCAGATTTCCTATCTAAACGCACTTCGTTATGGACTCAAGAGGATATTT
TTTGGTGGATTCTTCATCCGTGGGCATGCCTACACCATGGATACAATTTCTTTTGCAGTG
CATTTCTGGTCAAAAGGAGAGGCACAAGCTATGTTTCTGCGCCATGAGGGCTTCCTAGGA
GCTCTTGGAGCATTTATGAGTTATGAGAAGCATGGTCTTGATGACTTAAGGGCACATCAT
TTGGTTGAACGCTTCCCAATGGGTGCTCCATATGTTGGTGGAAAGATTCACGGGCCACCT
CTTGGAGATCTCAATGAGAAGATATCATGGATGGAGAAGTTTGTGCAGAAGGGTACTCAG
ATTACTGCCCCTGTACCTATGGGGGTTCCAGCTACGACAGGTATGGGAGGCTTTGAAAGG
CCGACTTCTAAGGGTGACATTTTGCGGTCAGATGCAAGTGCAGCGCTCAATGTTGGTGTT
CTCCATCTCGTACCCACATTGGATGTGTTTCCATTGTTAGAGGATCCAAAGACGTATGAA
CCAAACACAATTGATCTTGACCAGGATGAGTTCAAGTACTGGTTCAAGATTTTGTCAGAT
CATTTGCCGGACCTTGTGGACAAGGCAGTTGCTAGTGAAGGCGGGACTGATGATGCCAAG
AGGCGGGGAGATGCATTTGCGCATGCCTTTTCTGCTCATCTGGCAAGATTGATGGAGGAG
CCAGCTGCTTATGGAAAGTTTGGTTTGGTCAACCTGTTGGAGTTGAGAGAAGAATGTCTG
AGAGAATTTCAGTTTGTTGATGCATATATTAGCATCAAGCAAAGGGAAAATGAAGCTTCA
CTGGCTGTTTTACCAGATCTTCTGATGGAACTTGACAGTATGAATGAGGAAGCTAGGCTG
CTTGCTCTAATTGAAGGTGTCCTTGCTGCAAATATATTTGATTGGGGATCTCGAGCTTGT
GTAGAACTTTATCACAAGGGAACTATAATAGAAATCTATCGCATGAGTCGCAAGAAGATG
CAACGTCCTTGGCGGATTGATGACTTTGATATGTTCAAAAAGAGAATGCTGACTGATAGA
AAGGACCAACCATACAAAAGAGCACTGCTTTTTGTTGATAACTCAGGTGCTGATGTGGTC
CTTGGAATGCTTCCTTTAGCTCGGGAGCTTTTACGCCGTGGAACAGAGGTAGTTCTTGTT
GCAAATTCGTTGCCAGCTTTGAATGATGTTACTGCTAATGAACTTCCAGAAATTATAGCT
GAAGCCTCAAAGCACTGTAGTATCCTTCGGAAAGCTGCAGAAGCTGGTGGGTTGATAGTT
GATGCAATGGCTGGCATCCAAGATGATCTCAAGGATGAGCCAGTGTCAGTGCCACTAATG
GTTGTTGAGAATGGATGCGGCAGTCCATGTATTGATTTCCGGCAGGTTAGCTCAGAGCTT
GCTGCTGCTGCAAAGGATGCAGATTTGTTAATTTTGGAGGGCATGGGACGGTCACTGCAT
ACCAACCTCAATGCCCATTTTAAGTGTGATGCTCTAAAGCTTGCTATGGTCAAGAATAAG
CGATTGGCAGAGAAGCTCTTCAATGGAAATATATACGACTGCATTTGTAAATTTGAACCA
GTTTTTTAA

Peptide Sequence

PEP ID

EER97090
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:65842700:65852196:1 gene:SORBI_3002G275700 transcript:EER97090 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAANNSDPIPDQLGEGGAGVKHETGEEVGEETSSSAAQATATTMLPRSSSRPQLDLSGAA
IHGTLEDRNPTILLPNQSDDISHLALDIGGSLIKLVYFSRHAELSTEDKRKISTKRKLGM
FNGGRRSYPILGGRLHFVKFETGKLNECLDFISSKQLHRGGIDSPSWRSGAQPDDIVIKA
TGGGAYKYADVFKERLGVSLEKEDEMDCLVAGANFLLKAIRHEAFTHMDGQKRYVQIDQN
DLFPFLLVNIGSGVSIIKVDGHGEFQRVSGTNVGGGTYWGLGKLMTKCKSFDELLELSQR
GDNSTMDMLIGDIYGGLDYSKIGLSASTIASSFGKIISENKELSDYRPEDISLSLLRMIS
YNIGQISYLNALRYGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEAQAMFLRHEGFLG
ALGAFMSYEKHGLDDLRAHHLVERFPMGAPYVGGKIHGPPLGDLNEKISWMEKFVQKGTQ
ITAPVPMGVPATTGMGGFERPTSKGDILRSDASAALNVGVLHLVPTLDVFPLLEDPKTYE
PNTIDLDQDEFKYWFKILSDHLPDLVDKAVASEGGTDDAKRRGDAFAHAFSAHLARLMEE
PAAYGKFGLVNLLELREECLREFQFVDAYISIKQRENEASLAVLPDLLMELDSMNEEARL
LALIEGVLAANIFDWGSRACVELYHKGTIIEIYRMSRKKMQRPWRIDDFDMFKKRMLTDR
KDQPYKRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSLPALNDVTANELPEIIA
EASKHCSILRKAAEAGGLIVDAMAGIQDDLKDEPVSVPLMVVENGCGSPCIDFRQVSSEL
AAAAKDADLLILEGMGRSLHTNLNAHFKCDALKLAMVKNKRLAEKLFNGNIYDCICKFEP
VF

Transcript Sequence

Transcript ID

EER97090
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:65842700:65852196:1 gene:SORBI_3002G275700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGACTTTTCCTCAACGTTTGCGTCCTTTCACCGAGAGCCACAAGCCCGCAACTGCAACAA
GCAACAAATCCGCGCCCGCTCCGCCGCTTTCCTCCCCACCTCCACCCAGTGGGCGACGAC
TGGCGCCCATCGTCGATTCCCCGTTCTCCGTTTCCGTCTCGCGTGTTTGGTGCTTTCGAT
CTCCCCAAGGCGGCAGGCGGCAGCGCCGTGCGCGCCGCGGGAAGATTTTGGTTGGTGGAT
TGTTGGTGGCGGCTGCACTCCGTCCCACTGCACTGGTCCAATCTAAATGGCGGCCAATAA
TAGTGACCCAATCCCGGATCAGCTGGGGGAAGGAGGGGCGGGCGTGAAGCACGAAACAGG
GGAGGAGGTGGGGGAGGAGACGTCTTCTTCCGCGGCGCAGGCGACCGCGACGACGATGCT
GCCCCGGTCGAGCTCGCGGCCGCAGCTGGACCTCAGCGGCGCCGCGATCCACGGGACGCT
GGAGGACCGCAACCCTACCATCCTGCTTCCCAACCAATCCGACGACATCTCCCACCTCGC
CCTTGACATCGGCGGATCTCTTATAAAACTGGTATACTTCTCGCGACATGCTGAGCTTTC
CACTGAAGATAAGCGCAAGATATCCACAAAGAGAAAACTTGGGATGTTTAATGGTGGCAG
GAGAAGCTACCCGATTCTTGGAGGGAGGCTCCACTTTGTCAAATTCGAGACTGGGAAGCT
AAATGAATGTTTGGATTTCATTTCTTCCAAACAACTACATCGTGGTGGAATTGATTCACC
TTCGTGGCGCTCGGGAGCTCAGCCTGATGACATTGTAATTAAGGCAACAGGTGGTGGAGC
ATACAAGTATGCAGATGTCTTCAAGGAAAGATTGGGAGTCAGCCTTGAAAAGGAAGATGA
AATGGACTGTCTTGTGGCTGGAGCAAACTTTTTGCTTAAGGCTATACGTCATGAAGCTTT
TACACACATGGATGGTCAGAAGCGATATGTTCAGATTGATCAGAATGACTTGTTTCCCTT
CCTTCTTGTTAATATCGGATCTGGTGTTAGTATAATCAAGGTTGACGGGCATGGGGAATT
TCAGCGAGTAAGTGGGACAAATGTTGGTGGTGGTACGTACTGGGGATTGGGGAAGCTAAT
GACAAAGTGCAAGAGTTTTGATGAGTTGCTAGAGTTGAGCCAGCGTGGAGACAACAGCAC
CATGGACATGCTTATAGGAGACATATATGGTGGTCTGGACTACTCCAAGATTGGTCTTTC
AGCATCTACAATCGCCTCTAGTTTTGGAAAGATAATTTCAGAAAACAAAGAGCTATCAGA
TTATAGACCTGAGGATATATCGCTCTCCTTGTTACGGATGATTTCATACAACATTGGCCA
GATTTCCTATCTAAACGCACTTCGTTATGGACTCAAGAGGATATTTTTTGGTGGATTCTT
CATCCGTGGGCATGCCTACACCATGGATACAATTTCTTTTGCAGTGCATTTCTGGTCAAA
AGGAGAGGCACAAGCTATGTTTCTGCGCCATGAGGGCTTCCTAGGAGCTCTTGGAGCATT
TATGAGTTATGAGAAGCATGGTCTTGATGACTTAAGGGCACATCATTTGGTTGAACGCTT
CCCAATGGGTGCTCCATATGTTGGTGGAAAGATTCACGGGCCACCTCTTGGAGATCTCAA
TGAGAAGATATCATGGATGGAGAAGTTTGTGCAGAAGGGTACTCAGATTACTGCCCCTGT
ACCTATGGGGGTTCCAGCTACGACAGGTATGGGAGGCTTTGAAAGGCCGACTTCTAAGGG
TGACATTTTGCGGTCAGATGCAAGTGCAGCGCTCAATGTTGGTGTTCTCCATCTCGTACC
CACATTGGATGTGTTTCCATTGTTAGAGGATCCAAAGACGTATGAACCAAACACAATTGA
TCTTGACCAGGATGAGTTCAAGTACTGGTTCAAGATTTTGTCAGATCATTTGCCGGACCT
TGTGGACAAGGCAGTTGCTAGTGAAGGCGGGACTGATGATGCCAAGAGGCGGGGAGATGC
ATTTGCGCATGCCTTTTCTGCTCATCTGGCAAGATTGATGGAGGAGCCAGCTGCTTATGG
AAAGTTTGGTTTGGTCAACCTGTTGGAGTTGAGAGAAGAATGTCTGAGAGAATTTCAGTT
TGTTGATGCATATATTAGCATCAAGCAAAGGGAAAATGAAGCTTCACTGGCTGTTTTACC
AGATCTTCTGATGGAACTTGACAGTATGAATGAGGAAGCTAGGCTGCTTGCTCTAATTGA
AGGTGTCCTTGCTGCAAATATATTTGATTGGGGATCTCGAGCTTGTGTAGAACTTTATCA
CAAGGGAACTATAATAGAAATCTATCGCATGAGTCGCAAGAAGATGCAACGTCCTTGGCG
GATTGATGACTTTGATATGTTCAAAAAGAGAATGCTGACTGATAGAAAGGACCAACCATA
CAAAAGAGCACTGCTTTTTGTTGATAACTCAGGTGCTGATGTGGTCCTTGGAATGCTTCC
TTTAGCTCGGGAGCTTTTACGCCGTGGAACAGAGGTAGTTCTTGTTGCAAATTCGTTGCC
AGCTTTGAATGATGTTACTGCTAATGAACTTCCAGAAATTATAGCTGAAGCCTCAAAGCA
CTGTAGTATCCTTCGGAAAGCTGCAGAAGCTGGTGGGTTGATAGTTGATGCAATGGCTGG
CATCCAAGATGATCTCAAGGATGAGCCAGTGTCAGTGCCACTAATGGTTGTTGAGAATGG
ATGCGGCAGTCCATGTATTGATTTCCGGCAGGTTAGCTCAGAGCTTGCTGCTGCTGCAAA
GGATGCAGATTTGTTAATTTTGGAGGGCATGGGACGGTCACTGCATACCAACCTCAATGC
CCATTTTAAGTGTGATGCTCTAAAGCTTGCTATGGTCAAGAATAAGCGATTGGCAGAGAA
GCTCTTCAATGGAAATATATACGACTGCATTTGTAAATTTGAACCAGTTTTTTAACAATA
TGGGAGTGGCAGTGGAGCATTGGTAATGCACACTACATATTTTGCCACGGCATTGCTTAA
ATCTGGTAGTACTAACGAAGTGGGTATCTTTTCTTCAGTTTTATCACCAGTTTTCAGTTT
TATCGTCTTGCAGCAACTTGATTGGTGCAGCCGGCGAGACAGAAACAAGCATGCGGAATA
ATGGTCATTCCAGTGTACGGGGTACAAGAAACGCCCTTCCAATACGCAGCTAGTGTCTGT
GATAATAGTGTCTCAAACGATGTAATAAATAAAGGCTTTAAAGTCCATTTCCAGAAATAT
TGAATGGAGAGGTTTGAGCCAGCCAACTGGAGTTCGTGTACCCGAAAAGCGAGAACTCGT
TAGCAGCCTAGCAGGGCCGAAGTAATAACATACTAATCCTGGAATGATCTTGTCATTCTT
ATGCCGTGCTCGAATCAATCCAAAATTTGTTCACCTGCCGAGACAATGCTGTCACTCAAA
TGCTAAAAATCAGTTAT