Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER97062
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:65219009:65223442:1 gene:SORBI_3002G268100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTCCCGCCCTTGCCTCTGCCGTGGAGCCCATGGCCGTCGACGACTCCGCCTCCAAG
AAGGCCAAGCGCAAGCAGCTCAAGGCCGCCGCCGCCGCCGCGGAGGCAGAGGCGGAGGCC
GCTTCGGCTAAGAAGAAAGAGAAGAAGGAGAAGAAGCGCAAGGCGAAGGAGCCGTCCCCT
CCGCCCCCGTCGGCCTCGTCCTCTGACGAGGAGGAGAAGAGCAGCACCAGCTCCGAGGAG
ACGGCCCCCGCCGCGAAGAAAGCGAAGAAGGAGAAGACGAAGAAGAATGTCGAGGTCTCG
TCTTCAGCCTCGGACGACGACGGCGAGATCACGGCCAGCAGCGACGAGGACCCCGCGGAC
CCGAACGCGCTGACGAACTTCAGGATATCGGAGCCGCTGAGGCAGAGCCTCAGGTCCAAG
GGGATCAAGGCGCTGTTCCCCATCCAGGCCACCACTTTCGACCTCGTACTCGACGGCAAC
GACTTGGTTGGCCGAGCGCGCACCGGTCAGGGGAAAACTTTGGCTTTTGTCTTGCCCATA
TTGGAGTCTTTGGTTAACGGGGCACACAAGGCATCTAGACGAACTGAACATGGCAGGACC
CCAAGTGTTATTGTTCTGCTACCCACAAGAGAGCTGGCCAATCAGGTGCATGCCGACTTT
GAGTTTTATGGTGCAACATTTGGGCTTTCCGCATGTTGTGTGTATGGGGGTTCTCCTTAT
CGTCCTCAAGAAATGGCTTTGAGAAGGGGTGTGGACATTGTTGTTGGAACTCCTGGTCGT
GTCAAGGATTTCATTGTAAAAGGAACTCTCAATTTGAAAAACTTGAAATTCCGTGTCCTT
GATGAAGCTGATGAGATGCTTAACATGGGTTTTGTTGATGATGTCGAGCTCATTCTTGGC
AAAGTAGAAGATGCTACCAAAGTACAGACACTTCTGTTCAGTGCCACTCTGCCAGATTGG
GTGAATAAGCTCTCTATGAGGTTTCTGAAAGTTGACAGGAAAACGGTTGATCTTGTCGGT
AATGAGAAACTGAAGGCCAGTGCATCTGTTAAGCACCTTGCTCTTCCTTGTAACAAGGCA
GCAAGGGCACAAGTTATTCCAGACATTATCCGATGCTATAGCCATGGAGGCCGAACCATT
ATCTTCACTGAGACAAAGGATTCTGCATCAGAGCTTTCTGGTTTGATTCCTGGATCCCGT
GCCTTGCATGGAGATGTCGTGCAAGCTCAGCGTGAAGTCATTCTTGCTGGATTCCGTGGC
GGGAAGTTCCAAGTTTTGGTTGCTACAAATGTGGCGGCTCGTGGTCTGGATATTAATGAT
GTGCAGCTTATCATTCAGTGTGAACCTCCCCGTGACGTTGAAGCTTACATACACCGGTCA
GGTCGGACAGGGAGAGCAGGTAATACTGGTGTTGCTGTCATGCTTTATGAGCCCAGATAT
AAATACAGTGTCAACAGACTAGAAAGGGAGTCTGGGGTTAAGTTTGAGCATATCTCTGCG
CCACAGCCTACTGATGTAGCACAATCTGCTGGCAGTGAAGCTGCAGATGCCATTTCGAGT
GTGTCAGATAGTGTTATTCCTGTCTTCAGGCAGCAAGCAGAGCAGTTGCTAAGCTCTTCC
AGCCTGTCTGCAGCTGACTTGCTTGCCAAGGCACTTGCAAAGGCAGTTGGTTACACGGAC
ATAAAGAAAAGATCATTGTTATCTTCCATGGAGGATTACACTACATTACATCTTCAAACT
GGCAGACCGATGTGGTCACCTGGGTTTGCTTTTACTATATTGAAAAGGTTCATGCCAGAA
GAGAAACTTGCAGATGTAAAGGGTGCAACCCTCACGGCTGATGGAACAGGTGTTGTATTT
GATGTTCCTGCAGCAGATGTTGAAGATTACATTCAAGCTTCGGAGAATGCTGCACAGGTG
ACAATTGATGAAGTCAAGCAACTGCCACCCTTGCAAGAGAAGGAGCAGTCAAGAGGCAAC
TCTGGCGGAGGAAGATTTGGCCGTGGAGGTGGTGGGAGATTCTCTGGTGGTGGCCGTGGA
GGCGGCTTCGGTGGTGGTGGCAGAGGCAGAGGTGGTGGCGGCAGAGGGTTTTCTGGGAGG
GGAGGCGGCGGCAACAGATTTAACAGGAGGAATTAG

Peptide Sequence

PEP ID

EER97062
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:65219009:65223442:1 gene:SORBI_3002G268100 transcript:EER97062 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSPALASAVEPMAVDDSASKKAKRKQLKAAAAAAEAEAEAASAKKKEKKEKKRKAKEPSP
PPPSASSSDEEEKSSTSSEETAPAAKKAKKEKTKKNVEVSSSASDDDGEITASSDEDPAD
PNALTNFRISEPLRQSLRSKGIKALFPIQATTFDLVLDGNDLVGRARTGQGKTLAFVLPI
LESLVNGAHKASRRTEHGRTPSVIVLLPTRELANQVHADFEFYGATFGLSACCVYGGSPY
RPQEMALRRGVDIVVGTPGRVKDFIVKGTLNLKNLKFRVLDEADEMLNMGFVDDVELILG
KVEDATKVQTLLFSATLPDWVNKLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKA
ARAQVIPDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRG
GKFQVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRY
KYSVNRLERESGVKFEHISAPQPTDVAQSAGSEAADAISSVSDSVIPVFRQQAEQLLSSS
SLSAADLLAKALAKAVGYTDIKKRSLLSSMEDYTTLHLQTGRPMWSPGFAFTILKRFMPE
EKLADVKGATLTADGTGVVFDVPAADVEDYIQASENAAQVTIDEVKQLPPLQEKEQSRGN
SGGGRFGRGGGGRFSGGGRGGGFGGGGRGRGGGGRGFSGRGGGGNRFNRRN

Transcript Sequence

Transcript ID

EER97062
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:65219009:65223442:1 gene:SORBI_3002G268100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCTTTTCCGGCTGCGCCTTCCCCTCGCAGCCGCCAGCCCTCAACGCCCCTACCAGCAGC
AGCCACCGCCCGTTACCCGTGATGTCTCCCGCCCTTGCCTCTGCCGTGGAGCCCATGGCC
GTCGACGACTCCGCCTCCAAGAAGGCCAAGCGCAAGCAGCTCAAGGCCGCCGCCGCCGCC
GCGGAGGCAGAGGCGGAGGCCGCTTCGGCTAAGAAGAAAGAGAAGAAGGAGAAGAAGCGC
AAGGCGAAGGAGCCGTCCCCTCCGCCCCCGTCGGCCTCGTCCTCTGACGAGGAGGAGAAG
AGCAGCACCAGCTCCGAGGAGACGGCCCCCGCCGCGAAGAAAGCGAAGAAGGAGAAGACG
AAGAAGAATGTCGAGGTCTCGTCTTCAGCCTCGGACGACGACGGCGAGATCACGGCCAGC
AGCGACGAGGACCCCGCGGACCCGAACGCGCTGACGAACTTCAGGATATCGGAGCCGCTG
AGGCAGAGCCTCAGGTCCAAGGGGATCAAGGCGCTGTTCCCCATCCAGGCCACCACTTTC
GACCTCGTACTCGACGGCAACGACTTGGTTGGCCGAGCGCGCACCGGTCAGGGGAAAACT
TTGGCTTTTGTCTTGCCCATATTGGAGTCTTTGGTTAACGGGGCACACAAGGCATCTAGA
CGAACTGAACATGGCAGGACCCCAAGTGTTATTGTTCTGCTACCCACAAGAGAGCTGGCC
AATCAGGTGCATGCCGACTTTGAGTTTTATGGTGCAACATTTGGGCTTTCCGCATGTTGT
GTGTATGGGGGTTCTCCTTATCGTCCTCAAGAAATGGCTTTGAGAAGGGGTGTGGACATT
GTTGTTGGAACTCCTGGTCGTGTCAAGGATTTCATTGTAAAAGGAACTCTCAATTTGAAA
AACTTGAAATTCCGTGTCCTTGATGAAGCTGATGAGATGCTTAACATGGGTTTTGTTGAT
GATGTCGAGCTCATTCTTGGCAAAGTAGAAGATGCTACCAAAGTACAGACACTTCTGTTC
AGTGCCACTCTGCCAGATTGGGTGAATAAGCTCTCTATGAGGTTTCTGAAAGTTGACAGG
AAAACGGTTGATCTTGTCGGTAATGAGAAACTGAAGGCCAGTGCATCTGTTAAGCACCTT
GCTCTTCCTTGTAACAAGGCAGCAAGGGCACAAGTTATTCCAGACATTATCCGATGCTAT
AGCCATGGAGGCCGAACCATTATCTTCACTGAGACAAAGGATTCTGCATCAGAGCTTTCT
GGTTTGATTCCTGGATCCCGTGCCTTGCATGGAGATGTCGTGCAAGCTCAGCGTGAAGTC
ATTCTTGCTGGATTCCGTGGCGGGAAGTTCCAAGTTTTGGTTGCTACAAATGTGGCGGCT
CGTGGTCTGGATATTAATGATGTGCAGCTTATCATTCAGTGTGAACCTCCCCGTGACGTT
GAAGCTTACATACACCGGTCAGGTCGGACAGGGAGAGCAGGTAATACTGGTGTTGCTGTC
ATGCTTTATGAGCCCAGATATAAATACAGTGTCAACAGACTAGAAAGGGAGTCTGGGGTT
AAGTTTGAGCATATCTCTGCGCCACAGCCTACTGATGTAGCACAATCTGCTGGCAGTGAA
GCTGCAGATGCCATTTCGAGTGTGTCAGATAGTGTTATTCCTGTCTTCAGGCAGCAAGCA
GAGCAGTTGCTAAGCTCTTCCAGCCTGTCTGCAGCTGACTTGCTTGCCAAGGCACTTGCA
AAGGCAGTTGGTTACACGGACATAAAGAAAAGATCATTGTTATCTTCCATGGAGGATTAC
ACTACATTACATCTTCAAACTGGCAGACCGATGTGGTCACCTGGGTTTGCTTTTACTATA
TTGAAAAGGTTCATGCCAGAAGAGAAACTTGCAGATGTAAAGGGTGCAACCCTCACGGCT
GATGGAACAGGTGTTGTATTTGATGTTCCTGCAGCAGATGTTGAAGATTACATTCAAGCT
TCGGAGAATGCTGCACAGGTGACAATTGATGAAGTCAAGCAACTGCCACCCTTGCAAGAG
AAGGAGCAGTCAAGAGGCAACTCTGGCGGAGGAAGATTTGGCCGTGGAGGTGGTGGGAGA
TTCTCTGGTGGTGGCCGTGGAGGCGGCTTCGGTGGTGGTGGCAGAGGCAGAGGTGGTGGC
GGCAGAGGGTTTTCTGGGAGGGGAGGCGGCGGCAACAGATTTAACAGGAGGAATTAGAAG
CTGCTGCATGGGCGTTTGAGAGAACTATGTTGTGTTTGACGTAGTTTTGAGGAGGGGGAG
AGAATAGTCTCAGTTTTGGCTGCAATTGTATCGGCTTTTGTTTATTTTTTTGGTGTTCGA
ATACGACACTCACTTTTGCCAACGCAAGAGTGTACGTTTAAATCTACTCGAAAATTACAA
TCGTGACTTATTAAGTAAAGCTTTATATGTATTGTTTCAACTTGTCGGGCATGGGTGCAG
ATTCGGCCTCCTGTAGTCTGAAAGTATATATACATATAGTTGCTATTCCTGTCTGCC