Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER96650
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:56559563:56562497:1 gene:SORBI_3002G183300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTATCCCGCGCGCGGCGCCTCCATCCCGCCGTCCGCCGATTCCTCCTCCCAAACACG
CCTGCACCCTCCCGTCCTGCTCCGCTCCCACCTCAACACAGCGCTTCCGCCCAAACCTCT
AAAACCTTCTCGATCCTCTTCCGCCGCCACCTCTGCTCCTCACCACCCGCGCCGCCGCCG
TCGACATCACCGCCTCCAGCGGTGGTATCTTCTGACCTCCCGGCCGTTCGCGTCAATGAA
GTCTGCCCGGGATGCGGAATCTCCATGCAATCCTCCGACCCCGCGCTCCCGGGCTTCTTC
TTGCTCCCCTCCGCAAAATCCCCCGACTACCGCGCGCGCCTCGCGCCCGTCACCACCGAC
GACACTCGAATCTCCGCCTCCCTCAAGTCCGGTCACCTTAGGGAGGACTTAGAGCCGTCG
GGAAGCGACAAGCCGGCCGCGGCGGCGGCTGAGATGGCTGATTCCAAGGGAGAGGGAAAG
GTGTTGGTATGCGCGCGATGCCACTCCCTGCGCCACTACGGCCGCGTCAAGCATCCGGAC
GCCGAGCGCCTCCTCCCGGACTTCGACTTCGTCGCCGCCGTCGGCCCGCGCCTCGCGTCG
CCTTCCGGGGCCAGGTCGCTCGTGCTGCTCCTGGCGGACGCCTCTGACTTCGACGGCTCG
TTCCCGCGCGCCGTCGCGCGGTTGGTGGCCGCAGCCGGCGAGGCCCACAGCGCGGACTGG
AAGCACGGGGCCCCGGCCAACCTCCCACGCGCGCTGCTCGTGGTCACCAAGCTCGACCTG
CTCCCCACGCCGTCGCTGTCCCCCGACGATGTGCACGCGTGGGCGCACTCCCGCGCTCGT
GCCGGTGCAGGTTCAGACCTTCGGCTCGCTGGGGTGCACTTGGTTAGCGCCGCGCGCGGA
TGGGGCGTCCGCGACCTGCTCGAACATGTGCGCGAGCTCGCCGGGACGCGCGGCAATGTC
TGGGCCGTGGGTGCGCGAAACGTTGGTAAGTCGACGCTGCTCAATGCGATCGCCAGATGC
TCTGGCATAGCCGGGCGACCCACCTTGACGGAGGCGCCAGTTCCGGGAACGACCCTTGAT
GTGATTAAGCTAGATGGCGTTCTTGGTGCTCAAGCAAAGCTGTTTGACACTCCTGGACTT
CTCCATGGGCATCAGTTGACATCTAGACTGACGAGCGAGGAGATGAAGTTGGTTCAAGTG
AGAAAGGAGATGAGTCCCAGAACTTACAGAATAAAGACAGGACAGTCCATACATATCGGT
GGACTGGTGCGCCTGGACGTTGAAGAGTTAACTGTAGGATCGATCTATGTTACAGTTTGG
GCAGCACCACTTGTCCCACTTCACATGGGAAAGACAGAAAACGCAGCAGCATTGATGAAA
GAACACTTTGGCTTACAACTACAGCCTCCCATAGGCCAGGAGCAGGTAAAGGAGCTTGGT
AAATGGGTGAGGAAACAATTCAAAGTTTCCGGGAACAGTTGGGATATGAACTCTAAGGAT
ATAGCCATTGCTGGTATTGGCTGGTTTGGAATTGGGCTGAAAGGAGAGGCGGTGTTAGGA
TTATGGACATATGATGGTGTTGATGTCATCTCCAGGAGCTCCTTAGTCCATGAGAGGGCT
TCAATTTTTGAGGAAGCTGGTTTCACAGTTTCACAGATTGTTTCTAAGGCAGATAGCATG
ACCAATAAGCTGAAGAGCACCAAGAAGCCGAACAAGAAGAAAGAGAGAACGAAAAGTGCT
TCTCCCCTCACAAAGCCGGAAGCTTCAGAACCTGCTTCCAACATAGATGCTTGA

Peptide Sequence

PEP ID

EER96650
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:56559563:56562497:1 gene:SORBI_3002G183300 transcript:EER96650 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLSRARRLHPAVRRFLLPNTPAPSRPAPLPPQHSASAQTSKTFSILFRRHLCSSPPAPPP
STSPPPAVVSSDLPAVRVNEVCPGCGISMQSSDPALPGFFLLPSAKSPDYRARLAPVTTD
DTRISASLKSGHLREDLEPSGSDKPAAAAAEMADSKGEGKVLVCARCHSLRHYGRVKHPD
AERLLPDFDFVAAVGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHSADW
KHGAPANLPRALLVVTKLDLLPTPSLSPDDVHAWAHSRARAGAGSDLRLAGVHLVSAARG
WGVRDLLEHVRELAGTRGNVWAVGARNVGKSTLLNAIARCSGIAGRPTLTEAPVPGTTLD
VIKLDGVLGAQAKLFDTPGLLHGHQLTSRLTSEEMKLVQVRKEMSPRTYRIKTGQSIHIG
GLVRLDVEELTVGSIYVTVWAAPLVPLHMGKTENAAALMKEHFGLQLQPPIGQEQVKELG
KWVRKQFKVSGNSWDMNSKDIAIAGIGWFGIGLKGEAVLGLWTYDGVDVISRSSLVHERA
SIFEEAGFTVSQIVSKADSMTNKLKSTKKPNKKKERTKSASPLTKPEASEPASNIDA

Transcript Sequence

Transcript ID

EER96650
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:56559563:56562497:1 gene:SORBI_3002G183300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGGTTTGGAAGCAGCAAGCCTGTCCTCTCGAGTCGAACACCTGAAACCCACCGCCCGCCG
ATCACCAAGCGGCGGCGGCGGCGGCGGCACAGCAAGATGCTATCCCGCGCGCGGCGCCTC
CATCCCGCCGTCCGCCGATTCCTCCTCCCAAACACGCCTGCACCCTCCCGTCCTGCTCCG
CTCCCACCTCAACACAGCGCTTCCGCCCAAACCTCTAAAACCTTCTCGATCCTCTTCCGC
CGCCACCTCTGCTCCTCACCACCCGCGCCGCCGCCGTCGACATCACCGCCTCCAGCGGTG
GTATCTTCTGACCTCCCGGCCGTTCGCGTCAATGAAGTCTGCCCGGGATGCGGAATCTCC
ATGCAATCCTCCGACCCCGCGCTCCCGGGCTTCTTCTTGCTCCCCTCCGCAAAATCCCCC
GACTACCGCGCGCGCCTCGCGCCCGTCACCACCGACGACACTCGAATCTCCGCCTCCCTC
AAGTCCGGTCACCTTAGGGAGGACTTAGAGCCGTCGGGAAGCGACAAGCCGGCCGCGGCG
GCGGCTGAGATGGCTGATTCCAAGGGAGAGGGAAAGGTGTTGGTATGCGCGCGATGCCAC
TCCCTGCGCCACTACGGCCGCGTCAAGCATCCGGACGCCGAGCGCCTCCTCCCGGACTTC
GACTTCGTCGCCGCCGTCGGCCCGCGCCTCGCGTCGCCTTCCGGGGCCAGGTCGCTCGTG
CTGCTCCTGGCGGACGCCTCTGACTTCGACGGCTCGTTCCCGCGCGCCGTCGCGCGGTTG
GTGGCCGCAGCCGGCGAGGCCCACAGCGCGGACTGGAAGCACGGGGCCCCGGCCAACCTC
CCACGCGCGCTGCTCGTGGTCACCAAGCTCGACCTGCTCCCCACGCCGTCGCTGTCCCCC
GACGATGTGCACGCGTGGGCGCACTCCCGCGCTCGTGCCGGTGCAGGTTCAGACCTTCGG
CTCGCTGGGGTGCACTTGGTTAGCGCCGCGCGCGGATGGGGCGTCCGCGACCTGCTCGAA
CATGTGCGCGAGCTCGCCGGGACGCGCGGCAATGTCTGGGCCGTGGGTGCGCGAAACGTT
GGTAAGTCGACGCTGCTCAATGCGATCGCCAGATGCTCTGGCATAGCCGGGCGACCCACC
TTGACGGAGGCGCCAGTTCCGGGAACGACCCTTGATGTGATTAAGCTAGATGGCGTTCTT
GGTGCTCAAGCAAAGCTGTTTGACACTCCTGGACTTCTCCATGGGCATCAGTTGACATCT
AGACTGACGAGCGAGGAGATGAAGTTGGTTCAAGTGAGAAAGGAGATGAGTCCCAGAACT
TACAGAATAAAGACAGGACAGTCCATACATATCGGTGGACTGGTGCGCCTGGACGTTGAA
GAGTTAACTGTAGGATCGATCTATGTTACAGTTTGGGCAGCACCACTTGTCCCACTTCAC
ATGGGAAAGACAGAAAACGCAGCAGCATTGATGAAAGAACACTTTGGCTTACAACTACAG
CCTCCCATAGGCCAGGAGCAGGTAAAGGAGCTTGGTAAATGGGTGAGGAAACAATTCAAA
GTTTCCGGGAACAGTTGGGATATGAACTCTAAGGATATAGCCATTGCTGGTATTGGCTGG
TTTGGAATTGGGCTGAAAGGAGAGGCGGTGTTAGGATTATGGACATATGATGGTGTTGAT
GTCATCTCCAGGAGCTCCTTAGTCCATGAGAGGGCTTCAATTTTTGAGGAAGCTGGTTTC
ACAGTTTCACAGATTGTTTCTAAGGCAGATAGCATGACCAATAAGCTGAAGAGCACCAAG
AAGCCGAACAAGAAGAAAGAGAGAACGAAAAGTGCTTCTCCCCTCACAAAGCCGGAAGCT
TCAGAACCTGCTTCCAACATAGATGCTTGAGTGTTTTCATTCAGTCCTGTGACTGGAGCA
TCACTTTGGTGGTCATGTTCGAGCCCACAATGTTCTGCATTGACCCTAGAAACTGTTAAT
TGAATTCAGAAACAGAAGCTGAATGTACAATGTATTTTCTCCAGAAGAAGGAACCTGCAC
TCATCGAAGGATTTTCTATTTTTCATAGAGCTCCAGAGTTTGAACCTTTGCTAATTTGCT
GAGCTGGAGAGTCAGTTAGGAAATACTCTGAGATGTCAGTCAGTCAGTTATGGAAGACCT
ATCTGGAGAGTTAGTTAATTAGGAAATACTCTGTAAGATGTTTTGATGTTAACTTATAAA
ATCTAACATGAGTACTTGTGTTCCAGCATTAAAAGGGAGGTGTAGAGATATTCTAGTTTA
CATTTGATCTTATCATTCAGTTATAATTGTCTCTTGTAAAGTTGTAGCTCTGAACTTTGA
TACAGGTTCCACAGATGTTTGTTCTGTTTCCTTCAATTGCCTGCATTATAGATTCCGTGG
GCAACTGGGCATCTTTCTCAGACCACAGCTTGTCTAGTGATGAAAA