Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER96586
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:54661181:54663256:1 gene:SORBI_3002G173300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCCACTCTCTGTCGCTGTGGCTGCGCTCACCTCCTCCTCACCGTCTCCAACCTG
CTGCTCCTACTCTGTCATCTAACACGTGCATTCCCACTACCATCACCACCACCTTCAAAC
GCCGCCTCCCCGTCGCCTCCTCCTCCGGTGCCGCCGCCGCTACCGCGAGGCCTCCCACGG
CTGATACCGGCGTGGTCGCTGCCGCCCGTGAACCCGTTCACGGCGAAGGCGGCGTTCATC
CGGTACTGGAACCGCAAGGTGCGCGGCAACCGCCCGCACCCAGCCTTCCTCTTCGCCAAG
CTGTCGCCGCTCTCGGCCCCCGACGCGGCCACCTTCTCCACCCTGGCCTCCGCGGGCAAG
CTCGCCTCCCGCATCCGCGACTTCTGCGCCGCGGCGTCCCTGCTCTGCCCGTCCACCCCC
GCGGCGTCCTGGTCGGCGGCGTCGTCGTCCTCGTCCGTGGACGGTGGCGCGGCCGGCGGC
GTGGCGGCCTCCTCCTCCGGCGGCGGCGGCGCTGCCTCCTCCGCGCCGTTCAAGAACTAC
GAGAACGGCAACTTCAGCAGCTACGGCAACAGCGGCGGCGGCGGCTCCGACCAGTTCGCG
GTCTACTCGAGCGGGAAGAGCGGCCCCGTTGACTCGTTCAAGCGGTACGGCAAGGGCTCG
CTGGGCCGGAACGACTCCTTCACCAACTACGAGGAGGGGGGCAACGTCGGCACGTCCAGC
TTCAACTCCTACACCACCGGAGCCACCGGCGGCGCCGGGGAGTTCGCCGGGTACGCTGGA
CAGACCAACACGGTGGCGGTGACGTTCGCCACCTACGACAACACGGGCAACGGCCGCACG
CACGAGTTCACGGCCTACTCGCAGGACGCCAACTCCGGCGTGCAGAGCTTCACCGGCTAC
GGCAAGACCGCGAACGGCGCAGGCGAGTCCTTCAAGACCTACGGCAACAACTCCAACACC
GTCGCGTCCGGCTTCATCAACTACGGCGACAGGGCCAACGGCTTCAACGACACGTTCGCC
TCCTACGGCCTCGACGGGAACGCGCCCCAGAACACGTTCCGGAGCTACGCCTCCGGCAGC
AACGCCGCCGTCGACGAGTTCAAGGCGTACAGGGACCAAGCCAACGTCGGCGACGACAGC
TTCGCGTCCTACGCGAGCAACGCCAATGGCGCGGCCGCCGACTTCGACAGCTACGGCAAG
TCGACCAACCCCGGGAGCGTCGCGTTCAAGGGGTACGGCCAGGGATCCAACCCTAACCAC
CGCATCGGCTTCACGCACTACTCCGGCGAAAACACGACGTTCAAGGCCTACTCCAACGAA
GGCGTCGAGTTCAAGGAGTACCAGAACATGTCAAAGATGGAGGTGTCCAAAACGGCCGCA
CCGGCGACAACGGCTGGGCACCGGCTGCCCATGTGGTCGCCGGAGCCAGGGAAGTTCTTC
CGGGAGCGGGACCTCATGATGGGCAACCGAATGCCCATGCCGGACATCGCCGACAAGATG
CCGCACCGCGCGTTCCTGCCGAGGGACATCGCCGCCAAGATCCCGTTCGAGGAGAACGCG
GTGTCGGCGCTGTTCGGAGCGCCGCCGGGCACGGCGATGAGGCAGGTGGTGGCGTCGACG
GTGGCCGAGTGCGCGCGACCGCCCAGCCTGGGCGAGACGAAGCGGTGCACGACGTCGGCG
GAGGACATGCTGGACTTCGCGGTGGAGATGCTGGGCAGCAACATCGCGGTTCGCAGCACG
GAGTCCACGGCGGGCGGCGGCGGGGACGTCCGGCTCGGCAAGATCACGGGCATCGCCGGC
GGCAGCGTGACGAGGTCCGTGTCGTGCCACCAGAGCCTGTTCCCGTACCTGGTGTACTAC
TGCCACTCGGTGCCACGGGTGCGGCTGTACGAGGCGGACATCCTGGACGTGGACTCCAAC
CGGAAGATCAACCATGGCGTGGCCATCTGCCATCTCGAGACGTCGGATTGGAGCCCCAGC
CACGGGGCGTTCGTCGCGCTCGGTGGGAAACCTGGTCAGATCGAGGTCTGCCACTGGATC
TTCGAGGGAGACATGGCTTGGACCCTTGTTGATTGA

Peptide Sequence

PEP ID

EER96586
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:54661181:54663256:1 gene:SORBI_3002G173300 transcript:EER96586 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASTLCRCGCAHLLLTVSNLLLLLCHLTRAFPLPSPPPSNAASPSPPPPVPPPLPRGLPR
LIPAWSLPPVNPFTAKAAFIRYWNRKVRGNRPHPAFLFAKLSPLSAPDAATFSTLASAGK
LASRIRDFCAAASLLCPSTPAASWSAASSSSSVDGGAAGGVAASSSGGGGAASSAPFKNY
ENGNFSSYGNSGGGGSDQFAVYSSGKSGPVDSFKRYGKGSLGRNDSFTNYEEGGNVGTSS
FNSYTTGATGGAGEFAGYAGQTNTVAVTFATYDNTGNGRTHEFTAYSQDANSGVQSFTGY
GKTANGAGESFKTYGNNSNTVASGFINYGDRANGFNDTFASYGLDGNAPQNTFRSYASGS
NAAVDEFKAYRDQANVGDDSFASYASNANGAAADFDSYGKSTNPGSVAFKGYGQGSNPNH
RIGFTHYSGENTTFKAYSNEGVEFKEYQNMSKMEVSKTAAPATTAGHRLPMWSPEPGKFF
RERDLMMGNRMPMPDIADKMPHRAFLPRDIAAKIPFEENAVSALFGAPPGTAMRQVVAST
VAECARPPSLGETKRCTTSAEDMLDFAVEMLGSNIAVRSTESTAGGGGDVRLGKITGIAG
GSVTRSVSCHQSLFPYLVYYCHSVPRVRLYEADILDVDSNRKINHGVAICHLETSDWSPS
HGAFVALGGKPGQIEVCHWIFEGDMAWTLVD

Transcript Sequence

Transcript ID

EER96586
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:54661181:54663256:1 gene:SORBI_3002G173300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCCACTCTCTGTCGCTGTGGCTGCGCTCACCTCCTCCTCACCGTCTCCAACCTG
CTGCTCCTACTCTGTCATCTAACACGTGCATTCCCACTACCATCACCACCACCTTCAAAC
GCCGCCTCCCCGTCGCCTCCTCCTCCGGTGCCGCCGCCGCTACCGCGAGGCCTCCCACGG
CTGATACCGGCGTGGTCGCTGCCGCCCGTGAACCCGTTCACGGCGAAGGCGGCGTTCATC
CGGTACTGGAACCGCAAGGTGCGCGGCAACCGCCCGCACCCAGCCTTCCTCTTCGCCAAG
CTGTCGCCGCTCTCGGCCCCCGACGCGGCCACCTTCTCCACCCTGGCCTCCGCGGGCAAG
CTCGCCTCCCGCATCCGCGACTTCTGCGCCGCGGCGTCCCTGCTCTGCCCGTCCACCCCC
GCGGCGTCCTGGTCGGCGGCGTCGTCGTCCTCGTCCGTGGACGGTGGCGCGGCCGGCGGC
GTGGCGGCCTCCTCCTCCGGCGGCGGCGGCGCTGCCTCCTCCGCGCCGTTCAAGAACTAC
GAGAACGGCAACTTCAGCAGCTACGGCAACAGCGGCGGCGGCGGCTCCGACCAGTTCGCG
GTCTACTCGAGCGGGAAGAGCGGCCCCGTTGACTCGTTCAAGCGGTACGGCAAGGGCTCG
CTGGGCCGGAACGACTCCTTCACCAACTACGAGGAGGGGGGCAACGTCGGCACGTCCAGC
TTCAACTCCTACACCACCGGAGCCACCGGCGGCGCCGGGGAGTTCGCCGGGTACGCTGGA
CAGACCAACACGGTGGCGGTGACGTTCGCCACCTACGACAACACGGGCAACGGCCGCACG
CACGAGTTCACGGCCTACTCGCAGGACGCCAACTCCGGCGTGCAGAGCTTCACCGGCTAC
GGCAAGACCGCGAACGGCGCAGGCGAGTCCTTCAAGACCTACGGCAACAACTCCAACACC
GTCGCGTCCGGCTTCATCAACTACGGCGACAGGGCCAACGGCTTCAACGACACGTTCGCC
TCCTACGGCCTCGACGGGAACGCGCCCCAGAACACGTTCCGGAGCTACGCCTCCGGCAGC
AACGCCGCCGTCGACGAGTTCAAGGCGTACAGGGACCAAGCCAACGTCGGCGACGACAGC
TTCGCGTCCTACGCGAGCAACGCCAATGGCGCGGCCGCCGACTTCGACAGCTACGGCAAG
TCGACCAACCCCGGGAGCGTCGCGTTCAAGGGGTACGGCCAGGGATCCAACCCTAACCAC
CGCATCGGCTTCACGCACTACTCCGGCGAAAACACGACGTTCAAGGCCTACTCCAACGAA
GGCGTCGAGTTCAAGGAGTACCAGAACATGTCAAAGATGGAGGTGTCCAAAACGGCCGCA
CCGGCGACAACGGCTGGGCACCGGCTGCCCATGTGGTCGCCGGAGCCAGGGAAGTTCTTC
CGGGAGCGGGACCTCATGATGGGCAACCGAATGCCCATGCCGGACATCGCCGACAAGATG
CCGCACCGCGCGTTCCTGCCGAGGGACATCGCCGCCAAGATCCCGTTCGAGGAGAACGCG
GTGTCGGCGCTGTTCGGAGCGCCGCCGGGCACGGCGATGAGGCAGGTGGTGGCGTCGACG
GTGGCCGAGTGCGCGCGACCGCCCAGCCTGGGCGAGACGAAGCGGTGCACGACGTCGGCG
GAGGACATGCTGGACTTCGCGGTGGAGATGCTGGGCAGCAACATCGCGGTTCGCAGCACG
GAGTCCACGGCGGGCGGCGGCGGGGACGTCCGGCTCGGCAAGATCACGGGCATCGCCGGC
GGCAGCGTGACGAGGTCCGTGTCGTGCCACCAGAGCCTGTTCCCGTACCTGGTGTACTAC
TGCCACTCGGTGCCACGGGTGCGGCTGTACGAGGCGGACATCCTGGACGTGGACTCCAAC
CGGAAGATCAACCATGGCGTGGCCATCTGCCATCTCGAGACGTCGGATTGGAGCCCCAGC
CACGGGGCGTTCGTCGCGCTCGGTGGGAAACCTGGTCAGATCGAGGTCTGCCACTGGATC
TTCGAGGGAGACATGGCTTGGACCCTTGTTGATTGA