Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER96106
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:9041063:9044682:1 gene:SORBI_3002G085100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACGACGGCGGTGTCGTCGTCGTCGACCCCTCCGGCAAGCTCCGGCGGCGGCGGC
GGCGTCCGCCGGCGGCGCGTGCTGATGTTCCCGCTGCCGTTCCAGGGCCACCTGAGCCCG
ATGCTGCAGCTGGCCGGGGCGCTGCACGCGCGGGGCGGCCTGGACATCACCGTCTTCCAC
GCCGCCTTCAACGCGCCCGACCCGGCGCGCCACCCTCCGGGGTACCGCTTCGTCCCCGTC
GGCGAGGCCGTGGCGTGGGCCGACCTCGTCGTGTCCGGCGGGGACGACGACATCCCCGGC
GCGCTGCTGCGGATCAACGACCGCCTGCGGGACCCGTTCCGGGACCGCCTGCGCCAGGCT
CTCGCCCTCGCGGACGACGGCGCCGGCGCGCCGCCGCCGCCGGCGTGCCTGGTGCTGGAC
TCCAACCTCCGCGGGATGCAGCTGGTGGCCGAGGAGCTCGGCGTGCCCACGCTCGTGCTG
CGCACCGGCGCCGCCGCTTGCCTCGTCGCATACATGGCGTTCCCGGCGCTCTGCGACAAG
GGCCTTCTACCGCCGACATCCAAAGATAATTCCTGGTTGGACATGCCATTAGATGATCTT
ACACCACTACGACTAAGAGACATGGTCTTCTCATCGACTACTGCACATGCTAATATGAGA
AAATGCCTGAAATGTTTAGTGGATGCAACAAGGAGTTCTTCTGGTGTCATACTTAACACC
TTCCAAGACCTTGAGAATTCTGATCTTCAAAAGATTGCCAATGGCATCGGAGTTCCAATA
TATCCTATTGGGCCACTTCACAAGATTTCTTCAGGCACTGAGGACAGCTTGTTAGCACAA
GATTGGGCTTGTTTAGAGTGGTTGGACAAACAAGAGGTGGATTCTGTTCTTTATGTGAGC
TTTGGGAGCTTGGCAAATATAGATGAAAAGGAACTGTTGGAGATAGCATGGGGCTTGGCC
AACAGTCAAATGCCATTTCTATGGGTTATTCGTCATAACTTGGTCAAATCCTCTAATGAT
GTGAGCCTTCCTGATGGCTTTAAGGAGGCGACACATGGAAGGGGAATGGTGGTGCCCTGG
GTTCCACAACAAGAAGTTTTACGACACCATGCAATTGGTGGATTTTGGACTCATAATGGA
TGGAACTCAACTCTAGAGAGTATTTGTGAAGGTGTCCCGATGATATGTAGACCCCAGTTT
GCTGACCAGATGATAAATATGAGGTATGTCCAAGAAGTGTGGAAGATAGGGTTTGAGCTA
GATGGTGACTTGGAGAGGGGGAAGATCGAGAGGGCTGTTAAAAAGTTACTTTGTATGGAA
GAAGGAAGGCATATGAGACAAAGAGCCAAGGATTTAAGGAACAATGCCATTAAGTGCATC
AAGGAAGAAGGCAGCTCTAAGTCCGCAATTGAGCTATTGCTAAATCAGATAATGTCATTT
TAG

Peptide Sequence

PEP ID

EER96106
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:9041063:9044682:1 gene:SORBI_3002G085100 transcript:EER96106 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATTAVSSSSTPPASSGGGGGVRRRRVLMFPLPFQGHLSPMLQLAGALHARGGLDITVFH
AAFNAPDPARHPPGYRFVPVGEAVAWADLVVSGGDDDIPGALLRINDRLRDPFRDRLRQA
LALADDGAGAPPPPACLVLDSNLRGMQLVAEELGVPTLVLRTGAAACLVAYMAFPALCDK
GLLPPTSKDNSWLDMPLDDLTPLRLRDMVFSSTTAHANMRKCLKCLVDATRSSSGVILNT
FQDLENSDLQKIANGIGVPIYPIGPLHKISSGTEDSLLAQDWACLEWLDKQEVDSVLYVS
FGSLANIDEKELLEIAWGLANSQMPFLWVIRHNLVKSSNDVSLPDGFKEATHGRGMVVPW
VPQQEVLRHHAIGGFWTHNGWNSTLESICEGVPMICRPQFADQMINMRYVQEVWKIGFEL
DGDLERGKIERAVKKLLCMEEGRHMRQRAKDLRNNAIKCIKEEGSSKSAIELLLNQIMSF

Transcript Sequence

Transcript ID

EER96106
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:9041063:9044682:1 gene:SORBI_3002G085100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACAATACAACACAGAGCACGCATGCTAACGAAGGCCTAGACCTAGAGCACACGCATTTC
CCAACTCATCTCCCACATCAAATCCTCTTCACATCCCTCGCGTATCTTGCTTGCTTCCTT
CCTCGCTTCCAGCTGCAAATTTTCAGCCTTTCTTTTGCTTGATTTCAGCAATATTTCGAT
CGATCCTCTCGCGCGCGTCAATCGCCTCCAAATCAAATCCCATCCATTTTAGTATCCATC
CATCTCTTTCATTCATCGTCAAGAGCTGCAGCCAGACAACCAACCAGCCAGCCAGACCAT
GGCGACGACGGCGGTGTCGTCGTCGTCGACCCCTCCGGCAAGCTCCGGCGGCGGCGGCGG
CGTCCGCCGGCGGCGCGTGCTGATGTTCCCGCTGCCGTTCCAGGGCCACCTGAGCCCGAT
GCTGCAGCTGGCCGGGGCGCTGCACGCGCGGGGCGGCCTGGACATCACCGTCTTCCACGC
CGCCTTCAACGCGCCCGACCCGGCGCGCCACCCTCCGGGGTACCGCTTCGTCCCCGTCGG
CGAGGCCGTGGCGTGGGCCGACCTCGTCGTGTCCGGCGGGGACGACGACATCCCCGGCGC
GCTGCTGCGGATCAACGACCGCCTGCGGGACCCGTTCCGGGACCGCCTGCGCCAGGCTCT
CGCCCTCGCGGACGACGGCGCCGGCGCGCCGCCGCCGCCGGCGTGCCTGGTGCTGGACTC
CAACCTCCGCGGGATGCAGCTGGTGGCCGAGGAGCTCGGCGTGCCCACGCTCGTGCTGCG
CACCGGCGCCGCCGCTTGCCTCGTCGCATACATGGCGTTCCCGGCGCTCTGCGACAAGGG
CCTTCTACCGCCGACATCCAAAGATAATTCCTGGTTGGACATGCCATTAGATGATCTTAC
ACCACTACGACTAAGAGACATGGTCTTCTCATCGACTACTGCACATGCTAATATGAGAAA
ATGCCTGAAATGTTTAGTGGATGCAACAAGGAGTTCTTCTGGTGTCATACTTAACACCTT
CCAAGACCTTGAGAATTCTGATCTTCAAAAGATTGCCAATGGCATCGGAGTTCCAATATA
TCCTATTGGGCCACTTCACAAGATTTCTTCAGGCACTGAGGACAGCTTGTTAGCACAAGA
TTGGGCTTGTTTAGAGTGGTTGGACAAACAAGAGGTGGATTCTGTTCTTTATGTGAGCTT
TGGGAGCTTGGCAAATATAGATGAAAAGGAACTGTTGGAGATAGCATGGGGCTTGGCCAA
CAGTCAAATGCCATTTCTATGGGTTATTCGTCATAACTTGGTCAAATCCTCTAATGATGT
GAGCCTTCCTGATGGCTTTAAGGAGGCGACACATGGAAGGGGAATGGTGGTGCCCTGGGT
TCCACAACAAGAAGTTTTACGACACCATGCAATTGGTGGATTTTGGACTCATAATGGATG
GAACTCAACTCTAGAGAGTATTTGTGAAGGTGTCCCGATGATATGTAGACCCCAGTTTGC
TGACCAGATGATAAATATGAGGTATGTCCAAGAAGTGTGGAAGATAGGGTTTGAGCTAGA
TGGTGACTTGGAGAGGGGGAAGATCGAGAGGGCTGTTAAAAAGTTACTTTGTATGGAAGA
AGGAAGGCATATGAGACAAAGAGCCAAGGATTTAAGGAACAATGCCATTAAGTGCATCAA
GGAAGAAGGCAGCTCTAAGTCCGCAATTGAGCTATTGCTAAATCAGATAATGTCATTTTA
GTTTATATGCGTATTATGTACTTTACATGTAAGAAGTAATTCCATGAGAAGGTAGTTAAA
TAACAGTGCATGAGATGAAAAGTGGAAGATGGCTCATGTGATTCATTGAGAATAAACATT
TGTGAATAATATAGTTTATAATTTTATTG