Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER96035
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:7089158:7096499:1 gene:SORBI_3002G070600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCAGCCGCTCGTCGTGAAGAAGGACGACGACCTCGACGAGGAAGAGTACTATTCG
CCGTTCCTCGGCATCGAGAAGGGCGCCGTGCTGCAGGAGGCCCGCGTCTTCCACGACCCT
CAGCTCGACGCGCGGCGGTGCTGCCAGGTTATCACCAAGCTCCTGTACCTGCTCAACCAG
GGTGACACCTTTACCAAGGTTGAGGCCACAGAGGTCTTCTTTGCAACAACCAAGCTGTTC
CAGTCTAAAGATGCAGGACTTAGGAGGATGGTGTACCTCATGATCAAGGAACTCTCGCCT
TCAGCTGATGAGGTTATCATAGTAACCAGCTCTTTGATGAAGGACATGAATAGCAAAACC
GATATGTACCGTGCAAACGCTATTAGAGTTCTTTGTCGTATTATCGACTCAACTCTTCTC
ACCCAAATCGAGAGGTATTTGAAGCAAGCCATTGTTGACAAGAATCCTGTTGTTGCCAGT
GCAGCCCTTGTTAGTGGCATCTACTTGCTTCAAACAAGTCCGGAAGTTGTAAAAAGATGG
AGCAATGAAGTTCAAGAGGCTGTGCAGTCAAGAGCTGCTCTTGTGCAGTTTCATGCCCTT
GCTCTTCTTCACCAAATTAGACAAAATGATCGGTTGGCGGTCAGCAAGCTTGTCACTAGC
TTGACCAGGGGTTCAGTTCGCTCTCCTTTGGCCCAGTGCCTACTTATTCGCTACACAAGC
CAGGTTATTAGAGAGTCTGGCGTGAATCAAGGTGGGGATCGTCCTTTCTTTGATTTCCTC
GAGTCCTGTCTCCGGAACAAAGCAGAAATGGTCATACTTGAGGCTGCAAGAGCAATTACT
GAACTGAACGGTGTTACAAGCCGTGAGCTTACACCTGCAATCACTGTGCTGCAGTTGTTC
TTAAGTTCATCCAAACCTGTTCTCAGATTTGCAGCTGTTCGCACACTTAACAAGGTTGCA
TCAACTCATCCTTTGGCTGTCACAAATTGTAACATAGACATGGAGAGCTTAATCTCTGAT
CAGAACAGGAGCATTGCGACCCTTGCGATTACAACACTGTTGAAGACAGGCAACGAGTCA
AGTGTTGATCGTTTAATGAAACAGATGACCAACTTTATGTCAGACATAGCTGATGAATTC
AAGATCGTTGTTGTCGAAGCAATAAGATCTTTGTGCTTGAAGTTTCCTCTGAAATATCGC
TCATTGATGAACTTCTTGAGTAATATTCTACGGGAAGAGGGTGGATTTGAGTACAAGAAA
GCCATAGTTGATTCAATCATTATACTCATTAGAGATATTCCTGATGCAAAGGAAAGTGGT
TTATTTCACTTATGTGAATTCATAGAAGACTGTGAATTCACCTATTTGTCCACCCAGATA
CTTCACTTTTTGGGAAATGAAGGCCCAAAAACATCAGATCCCAGTAAATACATACGTTAT
ATATACAATAGGGTGATACTTGAAAATGCTACAGTTCGAGCTAGTGCAGTCAGCACATTG
GCAAAGTTTGGTGCCTTGGTTGACTCACTCAAGCCTCGCATATTTGTGCTCCTGAGACGC
TGCCTGTTTGATGGGGATGATGAGGTCCGTGACAGAGCGACCCTTTACCTCAAATTGTTA
GGTGGGGAAGCTACAGTTGGTGAGACAGAGAAGGATGTGAATGAATTTCTCTTTGGCTCA
CTTGATGTTCCACTAGCAAACTTGGAGACGAGTCTGCGGAATTATGAACCTTCGGATGTA
CCTTTTGATATTTCATCTGTTTCAAGGGAGACAAAATCCCAACCCCTTGCTGAGAAAAAG
TCTGCAGGCAAGAAATCAGCTGGTCCGGCATCTGCTGTCAGTGGCCCTGTTTCTACTGTT
GATGCTTCGTATGAGAAGCTTCTTTCATCCATTCCGGAATTTGCTGATTTTGGAAAGCTA
TTTAAGTCATCTGCACCTGTAGAATTGACTGAAGCTGAGACTGAATACTCAGTAAATGTT
GTGAAGCATATTTTTGATGGACATGTTGTGCTTCAATACAACTGTACCAATACAATTCCT
GAACAATTGCTTGAACAGGTGGTTGTTTTTGTTGATGCTTCTGAGGCTGATGAATTTTTA
GAAGTTGCTTCGAGGCCTTTAGAATCATTACCATATGATTCTCCTGGACAGACCTTTGTG
GCTTTTGAAAAGCCAGAAGGTGTCATTGCCACTGGCAAGTTCTCAAATATCCTGAAATTC
ATTGTTAAGGAGGTTGATCCGTCCACGGGTGAAGCTGAGGATGATGGTGTTGAGGATGAG
TACCAGCTTGAAGATCTTGAAATAGTTTCTGCGGATTATATGTTGAAGGTGGGAGTATCT
AACTTCCGAAATGCCTGGGAAAGCATGGATCCGGAGAGTGAGCGTGTTGACGAGTATGGG
CTTGGAGTAAGGGAGAGCTTGGCTGAGGCTGTAAGTGCTGTGATAAGCATCCTTGGCATG
CAGCCTTGCGAGGGAACTGACGTGGTCCCTAGCAATTCAAGGTCGCACACTTGTCTGCTC
TCTGGCGTTTTTGTCGGTAACGTGAAAGTCTTGGTGAGACTGTCATTTGGAATCAGTGCA
CCGAAGGAGGTGGCCATGAAGTTAGCAGTTAGATCTGATGATCCAGAGATCAGTGACAAG
ATCCACGAAATTGTCGCCAATGGCTAA

Peptide Sequence

PEP ID

EER96035
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:7089158:7096499:1 gene:SORBI_3002G070600 transcript:EER96035 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAQPLVVKKDDDLDEEEYYSPFLGIEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQ
GDTFTKVEATEVFFATTKLFQSKDAGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKT
DMYRANAIRVLCRIIDSTLLTQIERYLKQAIVDKNPVVASAALVSGIYLLQTSPEVVKRW
SNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTS
QVIRESGVNQGGDRPFFDFLESCLRNKAEMVILEAARAITELNGVTSRELTPAITVLQLF
LSSSKPVLRFAAVRTLNKVASTHPLAVTNCNIDMESLISDQNRSIATLAITTLLKTGNES
SVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKK
AIVDSIIILIRDIPDAKESGLFHLCEFIEDCEFTYLSTQILHFLGNEGPKTSDPSKYIRY
IYNRVILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDEVRDRATLYLKLL
GGEATVGETEKDVNEFLFGSLDVPLANLETSLRNYEPSDVPFDISSVSRETKSQPLAEKK
SAGKKSAGPASAVSGPVSTVDASYEKLLSSIPEFADFGKLFKSSAPVELTEAETEYSVNV
VKHIFDGHVVLQYNCTNTIPEQLLEQVVVFVDASEADEFLEVASRPLESLPYDSPGQTFV
AFEKPEGVIATGKFSNILKFIVKEVDPSTGEAEDDGVEDEYQLEDLEIVSADYMLKVGVS
NFRNAWESMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTDVVPSNSRSHTCLL
SGVFVGNVKVLVRLSFGISAPKEVAMKLAVRSDDPEISDKIHEIVANG

Transcript Sequence

Transcript ID

EER96035
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:7089158:7096499:1 gene:SORBI_3002G070600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAATTGCATCCGAAGGAAAGGAAACGCTGCTCAACGACTGGCAGGGTGGTGTACCCCTCC
CCCCTCTCTCCCCCAACAAGTCCTTTCCCGGCGCCAGATTCAGATCCATGCCGCACGCTT
CTCCATTCCTGTAAGCTCCGCGCCTCCTCCACTCCAAATCCAGCGAGCCCACCGCCCGGG
CCCCGGGGAAACCCCCTCGCGCCGCCGCCGCCGGCTCGGGCGCCCTCCCGCGCGCGCGCG
TCGCCCCGACAGCAGCCGCAGCCATGGCGCAGCCGCTCGTCGTGAAGAAGGACGACGACC
TCGACGAGGAAGAGTACTATTCGCCGTTCCTCGGCATCGAGAAGGGCGCCGTGCTGCAGG
AGGCCCGCGTCTTCCACGACCCTCAGCTCGACGCGCGGCGGTGCTGCCAGGTTATCACCA
AGCTCCTGTACCTGCTCAACCAGGGTGACACCTTTACCAAGGTTGAGGCCACAGAGGTCT
TCTTTGCAACAACCAAGCTGTTCCAGTCTAAAGATGCAGGACTTAGGAGGATGGTGTACC
TCATGATCAAGGAACTCTCGCCTTCAGCTGATGAGGTTATCATAGTAACCAGCTCTTTGA
TGAAGGACATGAATAGCAAAACCGATATGTACCGTGCAAACGCTATTAGAGTTCTTTGTC
GTATTATCGACTCAACTCTTCTCACCCAAATCGAGAGGTATTTGAAGCAAGCCATTGTTG
ACAAGAATCCTGTTGTTGCCAGTGCAGCCCTTGTTAGTGGCATCTACTTGCTTCAAACAA
GTCCGGAAGTTGTAAAAAGATGGAGCAATGAAGTTCAAGAGGCTGTGCAGTCAAGAGCTG
CTCTTGTGCAGTTTCATGCCCTTGCTCTTCTTCACCAAATTAGACAAAATGATCGGTTGG
CGGTCAGCAAGCTTGTCACTAGCTTGACCAGGGGTTCAGTTCGCTCTCCTTTGGCCCAGT
GCCTACTTATTCGCTACACAAGCCAGGTTATTAGAGAGTCTGGCGTGAATCAAGGTGGGG
ATCGTCCTTTCTTTGATTTCCTCGAGTCCTGTCTCCGGAACAAAGCAGAAATGGTCATAC
TTGAGGCTGCAAGAGCAATTACTGAACTGAACGGTGTTACAAGCCGTGAGCTTACACCTG
CAATCACTGTGCTGCAGTTGTTCTTAAGTTCATCCAAACCTGTTCTCAGATTTGCAGCTG
TTCGCACACTTAACAAGGTTGCATCAACTCATCCTTTGGCTGTCACAAATTGTAACATAG
ACATGGAGAGCTTAATCTCTGATCAGAACAGGAGCATTGCGACCCTTGCGATTACAACAC
TGTTGAAGACAGGCAACGAGTCAAGTGTTGATCGTTTAATGAAACAGATGACCAACTTTA
TGTCAGACATAGCTGATGAATTCAAGATCGTTGTTGTCGAAGCAATAAGATCTTTGTGCT
TGAAGTTTCCTCTGAAATATCGCTCATTGATGAACTTCTTGAGTAATATTCTACGGGAAG
AGGGTGGATTTGAGTACAAGAAAGCCATAGTTGATTCAATCATTATACTCATTAGAGATA
TTCCTGATGCAAAGGAAAGTGGTTTATTTCACTTATGTGAATTCATAGAAGACTGTGAAT
TCACCTATTTGTCCACCCAGATACTTCACTTTTTGGGAAATGAAGGCCCAAAAACATCAG
ATCCCAGTAAATACATACGTTATATATACAATAGGGTGATACTTGAAAATGCTACAGTTC
GAGCTAGTGCAGTCAGCACATTGGCAAAGTTTGGTGCCTTGGTTGACTCACTCAAGCCTC
GCATATTTGTGCTCCTGAGACGCTGCCTGTTTGATGGGGATGATGAGGTCCGTGACAGAG
CGACCCTTTACCTCAAATTGTTAGGTGGGGAAGCTACAGTTGGTGAGACAGAGAAGGATG
TGAATGAATTTCTCTTTGGCTCACTTGATGTTCCACTAGCAAACTTGGAGACGAGTCTGC
GGAATTATGAACCTTCGGATGTACCTTTTGATATTTCATCTGTTTCAAGGGAGACAAAAT
CCCAACCCCTTGCTGAGAAAAAGTCTGCAGGCAAGAAATCAGCTGGTCCGGCATCTGCTG
TCAGTGGCCCTGTTTCTACTGTTGATGCTTCGTATGAGAAGCTTCTTTCATCCATTCCGG
AATTTGCTGATTTTGGAAAGCTATTTAAGTCATCTGCACCTGTAGAATTGACTGAAGCTG
AGACTGAATACTCAGTAAATGTTGTGAAGCATATTTTTGATGGACATGTTGTGCTTCAAT
ACAACTGTACCAATACAATTCCTGAACAATTGCTTGAACAGGTGGTTGTTTTTGTTGATG
CTTCTGAGGCTGATGAATTTTTAGAAGTTGCTTCGAGGCCTTTAGAATCATTACCATATG
ATTCTCCTGGACAGACCTTTGTGGCTTTTGAAAAGCCAGAAGGTGTCATTGCCACTGGCA
AGTTCTCAAATATCCTGAAATTCATTGTTAAGGAGGTTGATCCGTCCACGGGTGAAGCTG
AGGATGATGGTGTTGAGGATGAGTACCAGCTTGAAGATCTTGAAATAGTTTCTGCGGATT
ATATGTTGAAGGTGGGAGTATCTAACTTCCGAAATGCCTGGGAAAGCATGGATCCGGAGA
GTGAGCGTGTTGACGAGTATGGGCTTGGAGTAAGGGAGAGCTTGGCTGAGGCTGTAAGTG
CTGTGATAAGCATCCTTGGCATGCAGCCTTGCGAGGGAACTGACGTGGTCCCTAGCAATT
CAAGGTCGCACACTTGTCTGCTCTCTGGCGTTTTTGTCGGTAACGTGAAAGTCTTGGTGA
GACTGTCATTTGGAATCAGTGCACCGAAGGAGGTGGCCATGAAGTTAGCAGTTAGATCTG
ATGATCCAGAGATCAGTGACAAGATCCACGAAATTGTCGCCAATGGCTAAGAACACTAGT
ATAATATTTTTTTTGACTCCTTTTTTGTTTTGGCTTTCATGCTACGGGAAGCTTGAGGGG
ATTCAATTAATTCTAGTATATGTAAGCTTGGTTTCCAGTTGGATCCATCTTTTGTTGCAC
CACCATTCTTCCTCGACACAATACAACAGTTTTTGGTTGATTTGGATCTGTACAATTTTC
CTTATATACCGGGGACATAATAGTATATGCAATAATAATCAAGTAAAGTTTTGTTATTGA
CGTCACC