Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER95596
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78890979:78895519:-1 gene:SORBI_3001G524200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGGCGCGGAGGAGGCTGCTGGCGGATGCGCCGCCGGAGCACCACCACAGGCAGGGC
GCGCCGCCGTCGGACTGGAGCGCGGGGTACCTCAACGGGTGGCTGTCGCAGCCGACGCCC
ATCTTCGGGCTCCGCCTCTGGGTGCTCATCGGCATCGCCGTCGGCGCCGCCATCGTGCTC
GTGCTCCTCCTCATCCTCGTCTGCCTCTCCCGCCGCCGCCGCCGCCGCGGCGACCTGCTC
GCCGCCAACCTCTACCCCGCCGCCGACACCAAGCTGCTCAAGCAGCACCTGCATCAGCAG
GCCACGTCCACGCCCACCAAGGACATCCAGGAGATCGTCCGCCGCCAGCAGGCGCAGACG
CCGCCGCCTCCGCCGGCGGCGCCGCAGCCCGCGGTGCAGCTCGCCAAGGCCGTGGCGGAG
CCACAGACTCCGCCGCCGCCGCCGCAACAGCAGCACAGGCCACCCGCGCGGAAGACGCCG
GGCAGCGGCATGTCGGCCACAACTAGCGGCGGGAGCGAACGGGACGGTGCCACGCCTAGG
AGCACCGGCAGCGCGGGGATGCCGGAGGTTTCGCACCTCGGGTGGGGCCACTGGTTCACG
CTCCGTGAGCTGGAGGAGGCCACCGACGGGCTCGCCGAGGAGAATGTGATCGGGGAGGGT
GGCTACGGGATCGTGTACAAGGGCACGTTGCACGACTCCACTTTGATCGCCGTCAAAAAT
CTGCTCAATAATAGGGGCCAGGCCGAGAAGGAGTTCAAGGTGGAAGTCGAAGCAATTGGT
CGTGTTCGGCACAAAAATCTCGTCAGGTTGCTTGGCTACTGCGTAGAGGGTGCTTACAGG
ATGCTTGTGTATGAGTATGTGGACAATGGTAATCTTGATCAGTGGCTTCACGGTGATGTT
GGGGAAGTGAGCCCACTAACATGGGACATCAGGATGAACATTATGCTTGCAACCGCTAAA
GGGCTGGCCTATCTTCACGAGGGGCTGGAACCGAAGGTTGTTCACCGTGACATCAAAGCT
AGCAATATTCTTCTTGACCAGCAGTGGAACGCTAAAGTATCAGATTTTGGGCTTGCAAAG
CTATTGTGCTCAGAGAAAAGCTATGTTACAACCCGTGTTATGGGAACCTTTGGTTATGTG
GCACCTGAATATGCCAGCACCGGAATGTTGAACGAGAGGAGTGATGTATATAGCTTTGGT
GTACTCATAATGGAGATCATCACTGGTAGATCTCCTGTAGATTATACAAGAGCAGCTGGA
GAGGTGAACTTGGTTGAGTGGCTCAAGACCATGGTTGCAGAGAGGAAAGCGGAGGAAGTA
GTGGACCCTAAGATGACTGAAAAGCCTTCTCCCAAAACACTGAAGCGAGCGCTTCTGGTT
GCGCTTCGCTGCGTCGACCCTGATGCGAACAAGAGGCCTAAAATGGGGCATGTTATTCAC
ATGCTCGAGATGGATGATCTTCTATTCCGAGATGATAAGAAGCCCGGGAGAGATGTCCAT
CCTCAGGGTTCAGACAGATACAGTTCCAAGGAGGAAGGGAGCTTCAGCAAGCGTGAGCAC
CACCATCATCGGTACAGATGA

Peptide Sequence

PEP ID

EER95596
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78890979:78895519:-1 gene:SORBI_3001G524200 transcript:EER95596 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGARRRLLADAPPEHHHRQGAPPSDWSAGYLNGWLSQPTPIFGLRLWVLIGIAVGAAIVL
VLLLILVCLSRRRRRRGDLLAANLYPAADTKLLKQHLHQQATSTPTKDIQEIVRRQQAQT
PPPPPAAPQPAVQLAKAVAEPQTPPPPPQQQHRPPARKTPGSGMSATTSGGSERDGATPR
STGSAGMPEVSHLGWGHWFTLRELEEATDGLAEENVIGEGGYGIVYKGTLHDSTLIAVKN
LLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDV
GEVSPLTWDIRMNIMLATAKGLAYLHEGLEPKVVHRDIKASNILLDQQWNAKVSDFGLAK
LLCSEKSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIITGRSPVDYTRAAG
EVNLVEWLKTMVAERKAEEVVDPKMTEKPSPKTLKRALLVALRCVDPDANKRPKMGHVIH
MLEMDDLLFRDDKKPGRDVHPQGSDRYSSKEEGSFSKREHHHHRYR

Transcript Sequence

Transcript ID

EER95596
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78890979:78895519:-1 gene:SORBI_3001G524200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTTAACTTTCATTAAAAATAGTATTAATACTTATATCTTTAAATAGATTTACTTTATGA
TCTGATTAATCTAATGATATTTATCCGACATCACAAATATTAGCATTCTTTTGTATATAT
TTTATCAAAGTCAAGATTGTTTGACTTCTTAAAATGCAAAGTAAAAAACTTACAGCCGTG
ACAGTGACACTAAAAACTGAACGGGTGAGAGCTTTCATGAGCTCATCACCATATCCCCAA
GACGTGATAACAAAGTGCTCATAAGATAATAATCAGTTGTCAGTGCCAGGGCCTTTGCTA
AAGCACCAAAGCACGCTCCTCATTTGCAGCGCCATTATTATTTTGCAAAGAGAGAAAGTT
CGCTACCTCAAACTCTCCACCAGCGCAGAGCTTTCACAAAATTTTGTTTTCTCAAAAAAA
AAAAAGATCAAATTTCAGTGGCGCACGCACTGAAGGATGGACCAGTCTGCGCAAGCACAA
GCACAAAACCATATCCGCTCAGCTGCGCGGTCACGCCACACTGACACTGGGCCAGCACGG
AAACCGGTCCTACCTGTCAGAGGAAGCGCACCGAGAAAAGCAACCCAAAGCTAACGGCCA
CCGCAGCACGCGACCCCACACCCCCGCCCCACCGAAAATGCTACGCGCACCCATCAAAGC
CTCCCCCAACACGCTCCTCTCCCTTCTCCAGTTCGCCTTCATCACATCTGCACCTCCCTG
TCTGCCCCAGTCGCATGCATATGTAAGCAGCAGCAGGCAAGAATCCAAAGCGGAAGGGCC
TCTCTCTTTCTCTCCCATCTCTGTTTCATCAGCTGCGGCGTGCGGCGATGGGGGCGCGGA
GGAGGCTGCTGGCGGATGCGCCGCCGGAGCACCACCACAGGCAGGGCGCGCCGCCGTCGG
ACTGGAGCGCGGGGTACCTCAACGGGTGGCTGTCGCAGCCGACGCCCATCTTCGGGCTCC
GCCTCTGGGTGCTCATCGGCATCGCCGTCGGCGCCGCCATCGTGCTCGTGCTCCTCCTCA
TCCTCGTCTGCCTCTCCCGCCGCCGCCGCCGCCGCGGCGACCTGCTCGCCGCCAACCTCT
ACCCCGCCGCCGACACCAAGCTGCTCAAGCAGCACCTGCATCAGCAGGCCACGTCCACGC
CCACCAAGGACATCCAGGAGATCGTCCGCCGCCAGCAGGCGCAGACGCCGCCGCCTCCGC
CGGCGGCGCCGCAGCCCGCGGTGCAGCTCGCCAAGGCCGTGGCGGAGCCACAGACTCCGC
CGCCGCCGCCGCAACAGCAGCACAGGCCACCCGCGCGGAAGACGCCGGGCAGCGGCATGT
CGGCCACAACTAGCGGCGGGAGCGAACGGGACGGTGCCACGCCTAGGAGCACCGGCAGCG
CGGGGATGCCGGAGGTTTCGCACCTCGGGTGGGGCCACTGGTTCACGCTCCGTGAGCTGG
AGGAGGCCACCGACGGGCTCGCCGAGGAGAATGTGATCGGGGAGGGTGGCTACGGGATCG
TGTACAAGGGCACGTTGCACGACTCCACTTTGATCGCCGTCAAAAATCTGCTCAATAATA
GGGGCCAGGCCGAGAAGGAGTTCAAGGTGGAAGTCGAAGCAATTGGTCGTGTTCGGCACA
AAAATCTCGTCAGGTTGCTTGGCTACTGCGTAGAGGGTGCTTACAGGATGCTTGTGTATG
AGTATGTGGACAATGGTAATCTTGATCAGTGGCTTCACGGTGATGTTGGGGAAGTGAGCC
CACTAACATGGGACATCAGGATGAACATTATGCTTGCAACCGCTAAAGGGCTGGCCTATC
TTCACGAGGGGCTGGAACCGAAGGTTGTTCACCGTGACATCAAAGCTAGCAATATTCTTC
TTGACCAGCAGTGGAACGCTAAAGTATCAGATTTTGGGCTTGCAAAGCTATTGTGCTCAG
AGAAAAGCTATGTTACAACCCGTGTTATGGGAACCTTTGGTTATGTGGCACCTGAATATG
CCAGCACCGGAATGTTGAACGAGAGGAGTGATGTATATAGCTTTGGTGTACTCATAATGG
AGATCATCACTGGTAGATCTCCTGTAGATTATACAAGAGCAGCTGGAGAGGTGAACTTGG
TTGAGTGGCTCAAGACCATGGTTGCAGAGAGGAAAGCGGAGGAAGTAGTGGACCCTAAGA
TGACTGAAAAGCCTTCTCCCAAAACACTGAAGCGAGCGCTTCTGGTTGCGCTTCGCTGCG
TCGACCCTGATGCGAACAAGAGGCCTAAAATGGGGCATGTTATTCACATGCTCGAGATGG
ATGATCTTCTATTCCGAGATGATAAGAAGCCCGGGAGAGATGTCCATCCTCAGGGTTCAG
ACAGATACAGTTCCAAGGAGGAAGGGAGCTTCAGCAAGCGTGAGCACCACCATCATCGGT
ACAGATGATGGACCGACCGACATATGAGGTTGTATGGATTGCCATTAGAGAGTAGCAATA
TTAACCATGTTCCCATCACTACATTCTTTCCCCTCTCTTTCAATCTCACTGGGTCTTTGA
TTGTATTATATGTGAGCATCCATCATTCTGTGACGATACTTGATACTTCAATCACACACA
CAATGACACAAGTGTAGCAGCATGGTGTTGTGAGTTTGTGACTGACTAACATGCCCAGGG
CAAAAACCTGCAAATTTTCTATGCAAGGAATCCAGCAAATGCAAGTACGGTTTTTGTCTA
CTCCACTGCATCCTGTTCAGTCG